Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F001029055.1_202015-06- 17] 8 sequences; 11,524,969 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq5 143 7e-29 seq8 118 3e-21 >seq5 Length=1457367 Score = 143 bits (158), Expect = 7e-29 Identities = 299/436 (69%), Gaps = 17/436 (4%) Strand=Plus/Minus Query 22219 GCATTCTTTGCTACCGCAGACGGTATAGTTTTTGAGAATCTAGTGACTAATTT---TGCA 22275 || ||||||||| || | || |||||||| ||||||| |||| ||||| |||| Sbjct 1119525 GCCTTCTTTGCTGCCTCTGATGGTATAGTAAATGAGAATTTAGTTGAGAATTTCAGTGCA 1119466 Query 22276 TCTGAAATTCAATACCCAGAGGCCAGATGTTTCTATGGTGTGCAAATGATGATTGAAAAT 22335 ||| | ||| ||||| || | |||||| |||||| | ||||| ||||| ||||| Sbjct 1119465 ---GAAGTGCAAATTCCAGAAGCTAAATGTTTTTATGGTTTCCAAATCATGATGGAAAAC 1119409 Query 22336 GTTCACGCGGAAACATATTCTATGATGCTACAGTCACTCGTAGAA--GATAAAGACGAAC 22393 ||||| | || || ||||| || | | | ||| || | ||| | | ||| Sbjct 1119408 ATTCACTCAGAGACCTATTCCCTGTTAATTGAT--ACTTATATCAAGGATCCAAAGGAA- 1119352 Query 22394 AACGAAA-CTTATTCCGCGCGATTCGCACCATTCAATCA-ATTAAGAATAAGGCAGATTG 22451 | ||| ||| ||| ||||| | ||||| ||| ||||| | ||||| || || Sbjct 1119351 AGCGATTTCTTGTTCAATGCGATCGAAAACATTCC-TCAGATTAAAGAGAAGGCCGAATG 1119293 Query 22452 GGCGCTGAAATGGAT---GAACAATGAACGTTCATTCGCGGAACGTCTTATTGCATTTGC 22508 ||| | | |||||| | ||| |||| | ||||| || | | |||| ||||| Sbjct 1119292 GGCTATCAGATGGATTCAGGACAGTGAATCTATCTTCGCAGAGAGATTGGTTGCTTTTGC 1119233 Query 22509 TGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCTTTTGGCTaaaaaaaCG 22568 || ||||||| ||||||||||| || | ||| ||| ||||| ||| | || || Sbjct 1119232 TGCCATTGAAGGTATTTTCTTTTCAGGTTCCTTTGCTGCTATCTTCTGGTTGAAGAAGAA 1119173 Query 22569 TGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCCGAGATGAGGGTCTTCA 22628 | | ||||| |||||||||||||| || || || || || ||||||| ||| | || Sbjct 1119172 AGGTCTAATGCCAGGTCTAACGTTTTCTAACGAATTGATCTGCAGAGATGAAGGTTTACA 1119113 Query 22629 TACCGATTTTGCGTGT 22644 |||||||||||| ||| Sbjct 1119112 TACCGATTTTGCATGT 1119097 >seq8 Length=940994 Score = 118 bits (130), Expect = 3e-21 Identities = 206/296 (70%), Gaps = 4/296 (1%) Strand=Plus/Minus Query 363430 ATCAATGGTGATATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATC 363489 || |||||||| | | |||||| || || |||||| | ||| | |||||| ||||||| Sbjct 325932 ATAAATGGTGAAGTCGCTGAACGTCCTCAACATATGATTATGAGAGTTGCTGTTGGTATT 325873 Query 363490 CATTGCCCGGATGTTGATGCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGTG-TA-T 363547 ||| | || | || | || ||||| || ||||| || | || || | | || | Sbjct 325872 CATGGTGACGACATCGAGTCTGCTATTGAGACTTATAATCTGAT--GTCCTTGAGATACT 325815 Query 363548 TCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTT 363607 ||| || || | ||||| | | ||||||||| |||| || ||||||||||| | Sbjct 325814 TCATTCATGCTTCTCCAACTCTTTTCAATGCTGGTACTCCACGCCCTCAGATGTCTTCAT 325755 Query 363608 GCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATT 363667 | || || | |||||||| || |||||||||||||| | || || | ||| | | Sbjct 325754 GTTTCCTAATCGCCATGAAGGATGACTCCATCGAGGGTATTTACGATACTTTGAAGGAAT 325695 Query 363668 GTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGT 363723 ||||| | ||||| |||| || || || |||||| || || ||||| ||||| Sbjct 325694 GTGCTATGATTTCTAAGACCGCTGGTGGTATTGGTTTACACATTCACAACATTCGT 325639 Score = 113 bits (124), Expect = 1e-19 Identities = 611/966 (63%), Gaps = 32/966 (3%) Strand=Plus/Minus Query 363760 TCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGTACGTCGACCAG 363819 ||||| ||| || | |||||| | ||||| || |||| ||||| | || || || || Sbjct 325065 TCGAACGGGTTGATCCCCATGGTACGTGTCTTCAACAACACTGCTCGTTATGTGGATCAA 325006 Query 363820 GGTGG-AGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATAT 363878 ||||| | ||| || | || || || ||| |||| | || || || || || || Sbjct 325005 GGTGGTAACAAAAGGCCA-GGTGCTTTCGCTTTGTACTTGGAACCATGGCACGCAGACAT 324947 Query 363879 TTTTGAGTTTCTTGAGCTCCGGAAAAAC-ACGGGAA--AAGAGGAATTGCGTGCACGTGA 363935 ||||| || | || ||||||| ||| |||| || ||||| ||| |||||| | || Sbjct 324946 CTTTGATTTCATAGATATCCGGAAGAACCACGGTAAGGAAGAG--ATT-CGTGCAAGAGA 324890 Query 363936 TCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTG---GAGGCAGGTAA 363992 | ||||| || || ||| || | || || ||||| || || ||| ||| Sbjct 324889 TTTGTTCCCAGCCCTCTGGATTCCAGATTTGTTCATGAAACGTGTTCAAGAGAATGGT-- 324832 Query 363993 GAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATGGGGTGACGA 364052 |||| || | | || | ||| ||| ||||||| | || ||||| | ||||| || Sbjct 324831 GAAT-GGACTTTGTTCTCTCCAAGTGAAGCTCCAGGTTTGTCTGATGTTTATGGTGATGA 324773 Query 364053 CTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGACAATTCCCGC 364112 | || || |||| ||| || | | || || | | | ||||| || || Sbjct 324772 ATTTGAAGCCTTATATGAACGTTACGTCGCTGAAGGTCGTGGTAGAAAGACTATCAAAGC 324713 Query 364113 ACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATGTT 364172 || || || |||| || ||| |||| || || | ||||| || || || | ||| | Sbjct 324712 TCAAAAACTGTGGTACGCTATCTTGGAATCTCAAACAGAGACTGGTACCCCATTCATGCT 324653 Query 364173 GTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAGAG 364232 ||||||||| | || ||| ||| |||||| || || | ||||| ||| | Sbjct 324652 TTACAAAGATGCCTGTAACATAAAGAGCAACCAAAAGAACTTGGGTACTATTAAATCCTC 324593 Query 364233 CAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGTATGTAACCT 364292 ||| | ||| || || |||| ||| | || || || ||||||||||| |||||| | Sbjct 324592 TAACTTGTGTTGTGAAATCGTTGAGTACTCAGCACCTGATGAGACTGCCGTTTGTAACTT 324533 Query 364293 TGCGTCGATCGCGCTTCCGGCGTTTGTAAAAGATGGTACTTTTG------ACCACCAGCA 364346 || || ||||| | || ||| | | ||| || | | || ||| | | Sbjct 324532 GGCCTCCATCGCTTTACCATCGTGTATTCAAGTTGCTGATGATGGTAAGACCCAGTGGTA 324473 Query 364347 TCTTTATG--ACGTAACCTATCA-TGC---------TACTTGCAATCTCGACAAGGTTAT 364394 | || || | || | || | ||| ||| | || | ||||||| || Sbjct 324472 TGATTTTGCCAAGTTGCATAAAATTGCCAAGGTTATCACTCGTAACTTGAACAAGGTCAT 324413 Query 364395 CGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAATATGCGTCATCGCCCGAT 364454 ||| || || || ||| |||||||||| ||||||||| | | | || || Sbjct 324412 CGATCGAAACTACTACCCAGTTCCTGAAGCTAGAAACTCTAATATGAGAAACAGACCTAT 324353 Query 364455 TGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAGATGGCATTTGATTC 364514 | ||| ||||| | || | |||||||| ||||||||| | | ||||||| || Sbjct 324352 GGCTCTAGGTGTCAATGGTTTGGCTGACGTGTTTATGATGTTGCGTGTTCCATTTGAGTC 324293 Query 364515 GCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGAC 364574 | || || | |||||| | | ||||| ||||| || || || | || Sbjct 324292 TCAAGAAGCCAAGGATCTAAACATCCAAATCTTCGAAACTATCTACCACGCTTCTTTGGA 324233 Query 364575 TGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGGGTCCCCTCT 364634 || || ||||| ||||| || | | ||| ||||| |||||||| || || || | Sbjct 324232 AGCCTCCTGTGAGTTGGCGAAGAAGGATGGACCTTACTCCACTTATGAAGGTTCTCCAAT 324173 Query 364635 TTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAACTG 364694 || || || | || |||| ||||| ||||| || ||||| | | |||| | || Sbjct 324172 CTCTCAAGGTATTTTGCAGTACGATCTGTGGAACACCAAACCATCGGATCTATGGGATTG 324113 Query 364695 GGATAC 364700 ||| || Sbjct 324112 GGACAC 324107 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303353466406256