Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F001029055.1_202015-06-
17] 8 sequences; 11,524,969 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq5 143 7e-29
seq8 118 3e-21
>seq5
Length=1457367
Score = 143 bits (158), Expect = 7e-29
Identities = 299/436 (69%), Gaps = 17/436 (4%)
Strand=Plus/Minus
Query 22219 GCATTCTTTGCTACCGCAGACGGTATAGTTTTTGAGAATCTAGTGACTAATTT---TGCA 22275
|| ||||||||| || | || |||||||| ||||||| |||| ||||| ||||
Sbjct 1119525 GCCTTCTTTGCTGCCTCTGATGGTATAGTAAATGAGAATTTAGTTGAGAATTTCAGTGCA 1119466
Query 22276 TCTGAAATTCAATACCCAGAGGCCAGATGTTTCTATGGTGTGCAAATGATGATTGAAAAT 22335
||| | ||| ||||| || | |||||| |||||| | ||||| ||||| |||||
Sbjct 1119465 ---GAAGTGCAAATTCCAGAAGCTAAATGTTTTTATGGTTTCCAAATCATGATGGAAAAC 1119409
Query 22336 GTTCACGCGGAAACATATTCTATGATGCTACAGTCACTCGTAGAA--GATAAAGACGAAC 22393
||||| | || || ||||| || | | | ||| || | ||| | | |||
Sbjct 1119408 ATTCACTCAGAGACCTATTCCCTGTTAATTGAT--ACTTATATCAAGGATCCAAAGGAA- 1119352
Query 22394 AACGAAA-CTTATTCCGCGCGATTCGCACCATTCAATCA-ATTAAGAATAAGGCAGATTG 22451
| ||| ||| ||| ||||| | ||||| ||| ||||| | ||||| || ||
Sbjct 1119351 AGCGATTTCTTGTTCAATGCGATCGAAAACATTCC-TCAGATTAAAGAGAAGGCCGAATG 1119293
Query 22452 GGCGCTGAAATGGAT---GAACAATGAACGTTCATTCGCGGAACGTCTTATTGCATTTGC 22508
||| | | |||||| | ||| |||| | ||||| || | | |||| |||||
Sbjct 1119292 GGCTATCAGATGGATTCAGGACAGTGAATCTATCTTCGCAGAGAGATTGGTTGCTTTTGC 1119233
Query 22509 TGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCTTTTGGCTaaaaaaaCG 22568
|| ||||||| ||||||||||| || | ||| ||| ||||| ||| | || ||
Sbjct 1119232 TGCCATTGAAGGTATTTTCTTTTCAGGTTCCTTTGCTGCTATCTTCTGGTTGAAGAAGAA 1119173
Query 22569 TGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCCGAGATGAGGGTCTTCA 22628
| | ||||| |||||||||||||| || || || || || ||||||| ||| | ||
Sbjct 1119172 AGGTCTAATGCCAGGTCTAACGTTTTCTAACGAATTGATCTGCAGAGATGAAGGTTTACA 1119113
Query 22629 TACCGATTTTGCGTGT 22644
|||||||||||| |||
Sbjct 1119112 TACCGATTTTGCATGT 1119097
>seq8
Length=940994
Score = 118 bits (130), Expect = 3e-21
Identities = 206/296 (70%), Gaps = 4/296 (1%)
Strand=Plus/Minus
Query 363430 ATCAATGGTGATATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATC 363489
|| |||||||| | | |||||| || || |||||| | ||| | |||||| |||||||
Sbjct 325932 ATAAATGGTGAAGTCGCTGAACGTCCTCAACATATGATTATGAGAGTTGCTGTTGGTATT 325873
Query 363490 CATTGCCCGGATGTTGATGCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGTG-TA-T 363547
||| | || | || | || ||||| || ||||| || | || || | | || |
Sbjct 325872 CATGGTGACGACATCGAGTCTGCTATTGAGACTTATAATCTGAT--GTCCTTGAGATACT 325815
Query 363548 TCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTT 363607
||| || || | ||||| | | ||||||||| |||| || ||||||||||| |
Sbjct 325814 TCATTCATGCTTCTCCAACTCTTTTCAATGCTGGTACTCCACGCCCTCAGATGTCTTCAT 325755
Query 363608 GCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATT 363667
| || || | |||||||| || |||||||||||||| | || || | ||| | |
Sbjct 325754 GTTTCCTAATCGCCATGAAGGATGACTCCATCGAGGGTATTTACGATACTTTGAAGGAAT 325695
Query 363668 GTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGT 363723
||||| | ||||| |||| || || || |||||| || || ||||| |||||
Sbjct 325694 GTGCTATGATTTCTAAGACCGCTGGTGGTATTGGTTTACACATTCACAACATTCGT 325639
Score = 113 bits (124), Expect = 1e-19
Identities = 611/966 (63%), Gaps = 32/966 (3%)
Strand=Plus/Minus
Query 363760 TCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGTACGTCGACCAG 363819
||||| ||| || | |||||| | ||||| || |||| ||||| | || || || ||
Sbjct 325065 TCGAACGGGTTGATCCCCATGGTACGTGTCTTCAACAACACTGCTCGTTATGTGGATCAA 325006
Query 363820 GGTGG-AGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATAT 363878
||||| | ||| || | || || || ||| |||| | || || || || || ||
Sbjct 325005 GGTGGTAACAAAAGGCCA-GGTGCTTTCGCTTTGTACTTGGAACCATGGCACGCAGACAT 324947
Query 363879 TTTTGAGTTTCTTGAGCTCCGGAAAAAC-ACGGGAA--AAGAGGAATTGCGTGCACGTGA 363935
||||| || | || ||||||| ||| |||| || ||||| ||| |||||| | ||
Sbjct 324946 CTTTGATTTCATAGATATCCGGAAGAACCACGGTAAGGAAGAG--ATT-CGTGCAAGAGA 324890
Query 363936 TCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTG---GAGGCAGGTAA 363992
| ||||| || || ||| || | || || ||||| || || ||| |||
Sbjct 324889 TTTGTTCCCAGCCCTCTGGATTCCAGATTTGTTCATGAAACGTGTTCAAGAGAATGGT-- 324832
Query 363993 GAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATGGGGTGACGA 364052
|||| || | | || | ||| ||| ||||||| | || ||||| | ||||| ||
Sbjct 324831 GAAT-GGACTTTGTTCTCTCCAAGTGAAGCTCCAGGTTTGTCTGATGTTTATGGTGATGA 324773
Query 364053 CTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGACAATTCCCGC 364112
| || || |||| ||| || | | || || | | | ||||| || ||
Sbjct 324772 ATTTGAAGCCTTATATGAACGTTACGTCGCTGAAGGTCGTGGTAGAAAGACTATCAAAGC 324713
Query 364113 ACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATGTT 364172
|| || || |||| || ||| |||| || || | ||||| || || || | ||| |
Sbjct 324712 TCAAAAACTGTGGTACGCTATCTTGGAATCTCAAACAGAGACTGGTACCCCATTCATGCT 324653
Query 364173 GTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAGAG 364232
||||||||| | || ||| ||| |||||| || || | ||||| ||| |
Sbjct 324652 TTACAAAGATGCCTGTAACATAAAGAGCAACCAAAAGAACTTGGGTACTATTAAATCCTC 324593
Query 364233 CAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGTATGTAACCT 364292
||| | ||| || || |||| ||| | || || || ||||||||||| |||||| |
Sbjct 324592 TAACTTGTGTTGTGAAATCGTTGAGTACTCAGCACCTGATGAGACTGCCGTTTGTAACTT 324533
Query 364293 TGCGTCGATCGCGCTTCCGGCGTTTGTAAAAGATGGTACTTTTG------ACCACCAGCA 364346
|| || ||||| | || ||| | | ||| || | | || ||| | |
Sbjct 324532 GGCCTCCATCGCTTTACCATCGTGTATTCAAGTTGCTGATGATGGTAAGACCCAGTGGTA 324473
Query 364347 TCTTTATG--ACGTAACCTATCA-TGC---------TACTTGCAATCTCGACAAGGTTAT 364394
| || || | || | || | ||| ||| | || | ||||||| ||
Sbjct 324472 TGATTTTGCCAAGTTGCATAAAATTGCCAAGGTTATCACTCGTAACTTGAACAAGGTCAT 324413
Query 364395 CGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAATATGCGTCATCGCCCGAT 364454
||| || || || ||| |||||||||| ||||||||| | | | || ||
Sbjct 324412 CGATCGAAACTACTACCCAGTTCCTGAAGCTAGAAACTCTAATATGAGAAACAGACCTAT 324353
Query 364455 TGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAGATGGCATTTGATTC 364514
| ||| ||||| | || | |||||||| ||||||||| | | ||||||| ||
Sbjct 324352 GGCTCTAGGTGTCAATGGTTTGGCTGACGTGTTTATGATGTTGCGTGTTCCATTTGAGTC 324293
Query 364515 GCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGAC 364574
| || || | |||||| | | ||||| ||||| || || || | ||
Sbjct 324292 TCAAGAAGCCAAGGATCTAAACATCCAAATCTTCGAAACTATCTACCACGCTTCTTTGGA 324233
Query 364575 TGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGGGTCCCCTCT 364634
|| || ||||| ||||| || | | ||| ||||| |||||||| || || || |
Sbjct 324232 AGCCTCCTGTGAGTTGGCGAAGAAGGATGGACCTTACTCCACTTATGAAGGTTCTCCAAT 324173
Query 364635 TTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAACTG 364694
|| || || | || |||| ||||| ||||| || ||||| | | |||| | ||
Sbjct 324172 CTCTCAAGGTATTTTGCAGTACGATCTGTGGAACACCAAACCATCGGATCTATGGGATTG 324113
Query 364695 GGATAC 364700
||| ||
Sbjct 324112 GGACAC 324107
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303353466406256
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |