Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F001029055.1_202015-06-
17] 8 sequences; 11,524,969 total letters
Query= NC_008291.1
Length=198050
Score E
Sequences producing significant alignments: (Bits) Value
seq5 260 2e-64
seq8 197 2e-45
>seq5
Length=1457367
Score = 260 bits (288), Expect = 2e-64
Identities = 417/594 (70%), Gaps = 10/594 (2%)
Strand=Plus/Plus
Query 32660 ACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAG 32719
|||||| |||||| |||| ||| || ||||| | || |||||||| |||||||| ||
Sbjct 1119097 ACATGCAAAATCGGTATGTAAACCTTCATCTCTGCAGATCAATTCGTTAGAAAACGTTAG 1119156
Query 32720 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAA 32779
|| |||||||| || ||| || | ||| || || | ||||| || || ||||||||
Sbjct 1119157 ACCTGGCATTAGACCTTTCTTCTTCAACCAGAAGATAGCAGCAAAGGAACCTGAAAAGAA 1119216
Query 32780 AATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CGCTGTCATG 32836
||| ||||| | || ||||| |||| | ||||||| | | | | ||||| ||
Sbjct 1119217 AATACCTTCAATGGCAGCAAAAGCAACCAATCTCTCTGCGAAGATAGATTCACTGTCCTG 1119276
Query 32837 TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATT 32896
||||| | |||||| |||||||||| ||| | ||| || | || || |||||
Sbjct 1119277 AATCCATCTGATAGCCCATTCGGCCTTCTCTTTAATCTGAGGAATGTTTTCGATCGCATT 1119336
Query 32897 AAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACAT 32956
|| | | | |||| || ||| || | ||| |||||||| || || ||| |
Sbjct 1119337 GAACAAGAAATCGCTTTCCTTTGGATCCTTGATATAAGTATCAATTAACAGGGAATAGGT 1119396
Query 32957 TTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAAT 33016
|| || ||||||||||| || ||||| || || || || ||| |||| || | |||
Sbjct 1119397 CTCTGAGTGAATGTTTTCCATCATGATTTGGAAACCATAAAAACATTTAGCTTCTGGAAT 1119456
Query 33017 CTGTACTTCTGTAC--AAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCT 33074
|| ||||||| || ||| || || ||||||| ||||| ||||| || ||| |||
Sbjct 1119457 TTGCACTTCTGCACTGAAATTC--TCAACTAAATTCTCATTTACTATACCATCAGAGGCA 1119514
Query 33075 GCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCG-TCTGGT--GTTAGTTTATTC 33131
||||| || ||||| ||| | || ||| || ||||| ||| | | | ||||||
Sbjct 1119515 GCAAAGAAGGCCAAGACACGGGAGATGAAAAATCTTTCGTTCTCATTCATACGGTTATTC 1119574
Query 33132 CAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCC 33191
||||||| ||||| || |||| ||| | ||||| | ||||| || || ||||||||
Sbjct 1119575 CAATCATGAATATCCTTCGATAGATCAATCTCTTCGGCCGTCCAGAACGAAGCCTCTGCT 1119634
Query 33192 TTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAATCTA 33245
| |||||| | ||| || ||||| |||| ||||| || | ||||||||||
Sbjct 1119635 CTCTTATACGCTTGCCAAATCTCATGGTATTTGATTGGGAATAGAACAAATCTA 1119688
>seq8
Length=940994
Score = 197 bits (218), Expect = 2e-45
Identities = 503/763 (66%), Gaps = 8/763 (1%)
Strand=Plus/Plus
Query 63310 GATATANNNNCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTT 63369
|||||| ||| | | |||||| || ||| || ||| || || || || | ||
Sbjct 325621 GATATATGAACCAGTAGAACGAATGTTGTGAATGTGTAAACCAATACCACCAGCGGTCTT 325680
Query 63370 AGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCAT 63429
||| || | || ||| || || ||||| || || ||||| || |||||| ||||
Sbjct 325681 AGAAATCATAGCACATTCCTTCAAAGTATCGTAAATACCCTCGATGGAGTCATCCTTCAT 325740
Query 63430 GTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGG 63489
| | ||| ||||| |||||| || | || ||| || ||||| || | || ||
Sbjct 325741 GGCGATTAGGAAACATGAAGACATCTGAGGGCGTGGAGTACCAGCATTGAAAAGAGTTGG 325800
Query 63490 AGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTAT 63549
|||||| ||| | || || | || | ||||| || ||||||||||| || || ||
Sbjct 325801 AGAAGCATGAATGAAGTATCTCAAGGACATCAGATTATAAGTCTCAATAGCAGACTCGAT 325860
Query 63550 ATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGAT 63609
|| |||||| || || || || | ||| | ||| || ||||| | |||| |||
Sbjct 325861 GTCGTCACCATGAATACCAACAGCAACTCTCATAATCATATGTTGAGGACGTTCAGCGAC 325920
Query 63610 CTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA 63669
| ||||| ||| || || || |||| |||||| || |||||||||||| |
Sbjct 325921 TTCACCATTTATCCTCAGCAGATAAGAACGCTCCAGAGTTTTGAACCCAAAATAGTTGAA 325980
Query 63670 --TGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACT 63727
||||| |||| || || | |||| | ||||| || | |||||||| |||||| ||
Sbjct 325981 GTTGAAA--TCTCTATCATACACAATAGCAGAGTTCAGCTCATCCTTATGTTTGTTGACA 326038
Query 63728 ACATCCATGGTAATACTT--GAAATAATAGGAAAATGTTTCCCATTTTTAGGATTGACAT 63785
| ||||| | ||| || || |||||| |||| ||| || || || || ||||
Sbjct 326039 ATGTCCAT--AACCTCTTGCGAGATCATAGGAGAATGAACCCCGTTCTTTGGGTTCACAT 326096
Query 63786 AGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTG 63845
||||||| || || || || | | ||| |||| | || | ||||| | ||| |
Sbjct 326097 AGTTGAACAATTCACTCACAACCTGAGAAAACTGTTTAGTAGTCTGCTTGTGCAAATTAG 326156
Query 63846 ATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTG 63905
| | |||||||||||||| | | | |||||||| ||||| || || | ||
Sbjct 326157 AGATAGCTATTCTAGCGGCCAAAGTAGCATAATCAGGATGCACAGTCGTCATATACGCAC 326216
Query 63906 CTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACACCATTATATATTCCTTGGA 63965
|||| || |||| | |||||||||| || || || ||||| | ||| | || |
Sbjct 326217 AAGTTTCAGCAGCCAAATTGTCCAATTCAACAGTAGTCACACCTTCATAGACACCAGAAA 326276
Query 63966 TAACCTTCATAGCTATTTTAATAGGATCTATATGATCAGTGTTTAAGCCATAACATAATT 64025
| | | | || |||| || ||| ||||| ||| || || ||||| |||||
Sbjct 326277 TGATACGCTGGGTGATCTTAACAGCATCAATATGTGCAGGGTCTAGACCATAGCATAAAC 326336
Query 64026 TTCTAATACGAGATGTGATTTTATCAAACATGACATTTTCCTT 64068
| ||||| | || || || || ||| | |||| ||||||
Sbjct 326337 GTGATATACGTGCAGTAATCTTGTCGAACCTAACATGTTCCTT 326379
Score = 138 bits (152), Expect = 1e-27
Identities = 593/935 (63%), Gaps = 24/935 (3%)
Strand=Plus/Plus
Query 62423 GATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAAT 62482
|| ||| |||| || ||| ||||| ||||||| || | ||||| || || ||
Sbjct 324179 GAACCTTCATAAGTGGAGTAAGGTCCATCCTTCTTCGCCAACTCACAGGAGGCTTCCAAA 324238
Query 62483 GCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGCGCTTCCAGGCTATCA 62542
| | ||| || || ||||||||||| | | |||||||| | ||||| | |||
Sbjct 324239 GAAGCGTGGTAGATAGTTTCGAAGATTTGGATGTTTAGATCCTTGGCTTCTTGAGACTCA 324298
Query 62543 AATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGT 62602
|||||| | || | |||||| |||| || || || | ||||| | | | ||||||
Sbjct 324299 AATGGAACACGCAACATCATAAACACGTCAGCCAAACCATTGACACCTAGAGCCATAGGT 324358
Query 62603 CTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATT 62662
|| | |||| |||||||| || |||||| |||| || || || || ||| || |
Sbjct 324359 CTGTTTCTCATATTAGAGTTTCTAGCTTCAGGAACTGGGTAGTAGTTTCGATCGATGACC 324418
Query 62663 TTATTGAGATTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGC 62722
|| || | || | || || ||| | | | | || ||| ||||||| | | |
Sbjct 324419 TTGTTCAAGTTACGAGTGATAACCTTGGCAATTTTATGCAACTTGGCAAAATCATACCAC 324478
Query 62723 ---------CCATCTATTA-CAA-------ACATGTT--CAATGCAACAGATGCCAGATT 62763
||||| || | ||| ||| | | || || | || |||| ||
Sbjct 324479 TGGGTCTTACCATC-ATCAGCAACTTGAATACACGATGGTAAAGCGATGGAGGCCAAGTT 324537
Query 62764 ACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACA 62823
||||||||| ||||| || | | || | | || ||| || | ||| |
Sbjct 324538 ACAAACGGCAGTCTCATCAGGTGCTGAGTACTCAACGATTTCACAACACAAGTTAGAGGA 324597
Query 62824 CTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAAT 62883
|| || || || || || | ||| || |||||| ||||||| ||||| || ||||| ||
Sbjct 324598 TTTAATAGTACCCAAGTTCTTTTGGTTGCTCTTTATGTTACAGGCATCTTTGTAAAGCAT 324657
Query 62884 GAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTT 62943
|||||| |||||||| || | |||||||| | || || | ||| | | |||| ||
Sbjct 324658 GAATGGGGTACCAGTCTCTGTTTGAGATTCCAAGATAGCGTACCACAGTTTTTGAGCTTT 324717
Query 62944 TATTATAGATTTGTATCTC--TTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCG 63001
|| | ||| || | | ||| |||| || ||| || ||| || ||
Sbjct 324718 GATAGT--CTTTCTACCACGACCTTCAGCGACGTAACGTTCATATAAGGCTTCAAATTCA 324775
Query 63002 TCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCG 63061
|| || |||||| || || ||| |||| ||| | | ||| | ||| || ||
Sbjct 324776 TCACCATAAACATCAGACAAACCTGGAGCTTCACTTGGAGAGAACAAAGTCCATTCACCA 324835
Query 63062 TCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTG 63121
| || | || |||||||| || | ||| |||||||| || ||| || | ||||||
Sbjct 324836 TTCTCTTGAACACGTTTCATGAACAAATCTGGAATCCAGAGGGCTGGGAACAAATCTCTT 324895
Query 63122 GTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAA 63181
| | | || || || || ||||| | ||| | ||| | | || || |
Sbjct 324896 GCACGAATCTCTTCCTTACCGTGGTTCTTCCGGATATCTATGAAATCAAAGATGTCTGCG 324955
Query 63182 TGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATG 63241
||||| ||||||||||| | || | | | || |||| |||||| || || ||||| |
Sbjct 324956 TGCCATGGTTCCAAGTACAAAGCGAAAGCACCTGGCCTTTTGTTACCACCTTGATCCACA 325015
Query 63242 TATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTG 63301
|| | ||| ||||| || | || | | ||| || || | || || || ||||| ||
Sbjct 325016 TAACGAGCAGTGTTGTTGAAGACACGTACCATGGGGATCAACCCGTTCGAAGTACCGTTA 325075
Query 63302 GTCCCTGAGATATANNNNCCACTGGCACGAATATT 63336
|| |||| ||||| || | | |||||| ||
Sbjct 325076 GTACCTGCAATATATGAACCCGTAGAACGAATGTT 325110
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633631936636800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |