Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F001029055.1_202015-06- 17] 8 sequences; 11,524,969 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq5 260 2e-64 seq8 197 2e-45 >seq5 Length=1457367 Score = 260 bits (288), Expect = 2e-64 Identities = 417/594 (70%), Gaps = 10/594 (2%) Strand=Plus/Plus Query 32660 ACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAG 32719 |||||| |||||| |||| ||| || ||||| | || |||||||| |||||||| || Sbjct 1119097 ACATGCAAAATCGGTATGTAAACCTTCATCTCTGCAGATCAATTCGTTAGAAAACGTTAG 1119156 Query 32720 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAA 32779 || |||||||| || ||| || | ||| || || | ||||| || || |||||||| Sbjct 1119157 ACCTGGCATTAGACCTTTCTTCTTCAACCAGAAGATAGCAGCAAAGGAACCTGAAAAGAA 1119216 Query 32780 AATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CGCTGTCATG 32836 ||| ||||| | || ||||| |||| | ||||||| | | | | ||||| || Sbjct 1119217 AATACCTTCAATGGCAGCAAAAGCAACCAATCTCTCTGCGAAGATAGATTCACTGTCCTG 1119276 Query 32837 TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATT 32896 ||||| | |||||| |||||||||| ||| | ||| || | || || ||||| Sbjct 1119277 AATCCATCTGATAGCCCATTCGGCCTTCTCTTTAATCTGAGGAATGTTTTCGATCGCATT 1119336 Query 32897 AAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACAT 32956 || | | | |||| || ||| || | ||| |||||||| || || ||| | Sbjct 1119337 GAACAAGAAATCGCTTTCCTTTGGATCCTTGATATAAGTATCAATTAACAGGGAATAGGT 1119396 Query 32957 TTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAAT 33016 || || ||||||||||| || ||||| || || || || ||| |||| || | ||| Sbjct 1119397 CTCTGAGTGAATGTTTTCCATCATGATTTGGAAACCATAAAAACATTTAGCTTCTGGAAT 1119456 Query 33017 CTGTACTTCTGTAC--AAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCT 33074 || ||||||| || ||| || || ||||||| ||||| ||||| || ||| ||| Sbjct 1119457 TTGCACTTCTGCACTGAAATTC--TCAACTAAATTCTCATTTACTATACCATCAGAGGCA 1119514 Query 33075 GCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCG-TCTGGT--GTTAGTTTATTC 33131 ||||| || ||||| ||| | || ||| || ||||| ||| | | | |||||| Sbjct 1119515 GCAAAGAAGGCCAAGACACGGGAGATGAAAAATCTTTCGTTCTCATTCATACGGTTATTC 1119574 Query 33132 CAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCC 33191 ||||||| ||||| || |||| ||| | ||||| | ||||| || || |||||||| Sbjct 1119575 CAATCATGAATATCCTTCGATAGATCAATCTCTTCGGCCGTCCAGAACGAAGCCTCTGCT 1119634 Query 33192 TTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAATCTA 33245 | |||||| | ||| || ||||| |||| ||||| || | |||||||||| Sbjct 1119635 CTCTTATACGCTTGCCAAATCTCATGGTATTTGATTGGGAATAGAACAAATCTA 1119688 >seq8 Length=940994 Score = 197 bits (218), Expect = 2e-45 Identities = 503/763 (66%), Gaps = 8/763 (1%) Strand=Plus/Plus Query 63310 GATATANNNNCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTT 63369 |||||| ||| | | |||||| || ||| || ||| || || || || | || Sbjct 325621 GATATATGAACCAGTAGAACGAATGTTGTGAATGTGTAAACCAATACCACCAGCGGTCTT 325680 Query 63370 AGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCAT 63429 ||| || | || ||| || || ||||| || || ||||| || |||||| |||| Sbjct 325681 AGAAATCATAGCACATTCCTTCAAAGTATCGTAAATACCCTCGATGGAGTCATCCTTCAT 325740 Query 63430 GTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGG 63489 | | ||| ||||| |||||| || | || ||| || ||||| || | || || Sbjct 325741 GGCGATTAGGAAACATGAAGACATCTGAGGGCGTGGAGTACCAGCATTGAAAAGAGTTGG 325800 Query 63490 AGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTAT 63549 |||||| ||| | || || | || | ||||| || ||||||||||| || || || Sbjct 325801 AGAAGCATGAATGAAGTATCTCAAGGACATCAGATTATAAGTCTCAATAGCAGACTCGAT 325860 Query 63550 ATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGAT 63609 || |||||| || || || || | ||| | ||| || ||||| | |||| ||| Sbjct 325861 GTCGTCACCATGAATACCAACAGCAACTCTCATAATCATATGTTGAGGACGTTCAGCGAC 325920 Query 63610 CTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA 63669 | ||||| ||| || || || |||| |||||| || |||||||||||| | Sbjct 325921 TTCACCATTTATCCTCAGCAGATAAGAACGCTCCAGAGTTTTGAACCCAAAATAGTTGAA 325980 Query 63670 --TGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACT 63727 ||||| |||| || || | |||| | ||||| || | |||||||| |||||| || Sbjct 325981 GTTGAAA--TCTCTATCATACACAATAGCAGAGTTCAGCTCATCCTTATGTTTGTTGACA 326038 Query 63728 ACATCCATGGTAATACTT--GAAATAATAGGAAAATGTTTCCCATTTTTAGGATTGACAT 63785 | ||||| | ||| || || |||||| |||| ||| || || || || |||| Sbjct 326039 ATGTCCAT--AACCTCTTGCGAGATCATAGGAGAATGAACCCCGTTCTTTGGGTTCACAT 326096 Query 63786 AGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTG 63845 ||||||| || || || || | | ||| |||| | || | ||||| | ||| | Sbjct 326097 AGTTGAACAATTCACTCACAACCTGAGAAAACTGTTTAGTAGTCTGCTTGTGCAAATTAG 326156 Query 63846 ATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTG 63905 | | |||||||||||||| | | | |||||||| ||||| || || | || Sbjct 326157 AGATAGCTATTCTAGCGGCCAAAGTAGCATAATCAGGATGCACAGTCGTCATATACGCAC 326216 Query 63906 CTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACACCATTATATATTCCTTGGA 63965 |||| || |||| | |||||||||| || || || ||||| | ||| | || | Sbjct 326217 AAGTTTCAGCAGCCAAATTGTCCAATTCAACAGTAGTCACACCTTCATAGACACCAGAAA 326276 Query 63966 TAACCTTCATAGCTATTTTAATAGGATCTATATGATCAGTGTTTAAGCCATAACATAATT 64025 | | | | || |||| || ||| ||||| ||| || || ||||| ||||| Sbjct 326277 TGATACGCTGGGTGATCTTAACAGCATCAATATGTGCAGGGTCTAGACCATAGCATAAAC 326336 Query 64026 TTCTAATACGAGATGTGATTTTATCAAACATGACATTTTCCTT 64068 | ||||| | || || || || ||| | |||| |||||| Sbjct 326337 GTGATATACGTGCAGTAATCTTGTCGAACCTAACATGTTCCTT 326379 Score = 138 bits (152), Expect = 1e-27 Identities = 593/935 (63%), Gaps = 24/935 (3%) Strand=Plus/Plus Query 62423 GATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAAT 62482 || ||| |||| || ||| ||||| ||||||| || | ||||| || || || Sbjct 324179 GAACCTTCATAAGTGGAGTAAGGTCCATCCTTCTTCGCCAACTCACAGGAGGCTTCCAAA 324238 Query 62483 GCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGCGCTTCCAGGCTATCA 62542 | | ||| || || ||||||||||| | | |||||||| | ||||| | ||| Sbjct 324239 GAAGCGTGGTAGATAGTTTCGAAGATTTGGATGTTTAGATCCTTGGCTTCTTGAGACTCA 324298 Query 62543 AATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGT 62602 |||||| | || | |||||| |||| || || || | ||||| | | | |||||| Sbjct 324299 AATGGAACACGCAACATCATAAACACGTCAGCCAAACCATTGACACCTAGAGCCATAGGT 324358 Query 62603 CTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATT 62662 || | |||| |||||||| || |||||| |||| || || || || ||| || | Sbjct 324359 CTGTTTCTCATATTAGAGTTTCTAGCTTCAGGAACTGGGTAGTAGTTTCGATCGATGACC 324418 Query 62663 TTATTGAGATTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGC 62722 || || | || | || || ||| | | | | || ||| ||||||| | | | Sbjct 324419 TTGTTCAAGTTACGAGTGATAACCTTGGCAATTTTATGCAACTTGGCAAAATCATACCAC 324478 Query 62723 ---------CCATCTATTA-CAA-------ACATGTT--CAATGCAACAGATGCCAGATT 62763 ||||| || | ||| ||| | | || || | || |||| || Sbjct 324479 TGGGTCTTACCATC-ATCAGCAACTTGAATACACGATGGTAAAGCGATGGAGGCCAAGTT 324537 Query 62764 ACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACA 62823 ||||||||| ||||| || | | || | | || ||| || | ||| | Sbjct 324538 ACAAACGGCAGTCTCATCAGGTGCTGAGTACTCAACGATTTCACAACACAAGTTAGAGGA 324597 Query 62824 CTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAAT 62883 || || || || || || | ||| || |||||| ||||||| ||||| || ||||| || Sbjct 324598 TTTAATAGTACCCAAGTTCTTTTGGTTGCTCTTTATGTTACAGGCATCTTTGTAAAGCAT 324657 Query 62884 GAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTT 62943 |||||| |||||||| || | |||||||| | || || | ||| | | |||| || Sbjct 324658 GAATGGGGTACCAGTCTCTGTTTGAGATTCCAAGATAGCGTACCACAGTTTTTGAGCTTT 324717 Query 62944 TATTATAGATTTGTATCTC--TTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCG 63001 || | ||| || | | ||| |||| || ||| || ||| || || Sbjct 324718 GATAGT--CTTTCTACCACGACCTTCAGCGACGTAACGTTCATATAAGGCTTCAAATTCA 324775 Query 63002 TCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCG 63061 || || |||||| || || ||| |||| ||| | | ||| | ||| || || Sbjct 324776 TCACCATAAACATCAGACAAACCTGGAGCTTCACTTGGAGAGAACAAAGTCCATTCACCA 324835 Query 63062 TCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTG 63121 | || | || |||||||| || | ||| |||||||| || ||| || | |||||| Sbjct 324836 TTCTCTTGAACACGTTTCATGAACAAATCTGGAATCCAGAGGGCTGGGAACAAATCTCTT 324895 Query 63122 GTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAA 63181 | | | || || || || ||||| | ||| | ||| | | || || | Sbjct 324896 GCACGAATCTCTTCCTTACCGTGGTTCTTCCGGATATCTATGAAATCAAAGATGTCTGCG 324955 Query 63182 TGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATG 63241 ||||| ||||||||||| | || | | | || |||| |||||| || || ||||| | Sbjct 324956 TGCCATGGTTCCAAGTACAAAGCGAAAGCACCTGGCCTTTTGTTACCACCTTGATCCACA 325015 Query 63242 TATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTG 63301 || | ||| ||||| || | || | | ||| || || | || || || ||||| || Sbjct 325016 TAACGAGCAGTGTTGTTGAAGACACGTACCATGGGGATCAACCCGTTCGAAGTACCGTTA 325075 Query 63302 GTCCCTGAGATATANNNNCCACTGGCACGAATATT 63336 || |||| ||||| || | | |||||| || Sbjct 325076 GTACCTGCAATATATGAACCCGTAGAACGAATGTT 325110 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633631936636800