Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F001029055.1_202015-06- 17] 8 sequences; 11,524,969 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq5 230 3e-55 >seq5 Length=1457367 Score = 230 bits (254), Expect = 3e-55 Identities = 408/590 (69%), Gaps = 9/590 (2%) Strand=Plus/Plus Query 93092 CACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAA 93151 || ||||| ||||||||||||||||| |||| | ||||| || || || |||| | Sbjct 1119098 CATGCAAAATCGGTATGTAAACCTTCATCTCTGCAGATCAATTCGTTAGAAAACGTTAGA 1119157 Query 93152 CCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaT 93211 ||||| | || ||| ||||| | ||| || || | |||||| ||| ||||| || Sbjct 1119158 CCTGGCATTAGACCTTTCTTCTTCAACCAGAAGATAGCAGCAAAGGAACCTGAAAAGAAA 1119217 Query 93212 ATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTG--C 93269 |||||||| | ||| ||||| || || | | || || || | | | | |||| | Sbjct 1119218 ATACCTTCAATGGCAGCAAAAGCAACCAATCTCTCTGCGAAGATAG---ATTCACTGTCC 1119274 Query 93270 TGA-TCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCG 93328 ||| ||||| | | |||||| ||||| || | ||||| ||| | ||||||| || Sbjct 1119275 TGAATCCATCTGATAGCCCATTCGGCCTTCTCTTTAATCTGAGGAATGTTTTCGATCGCA 1119334 Query 93329 TTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATAC 93388 || || | | |||| | || | | ||| || || ||||| |||||||| ||||| Sbjct 1119335 TTGAACAAGAAATCGCTTTCCTTTGGATCCTTGATATAAGTATCAATTAACAGGGAATAG 1119394 Query 93389 ATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTG 93448 | || || || | || ||||| |||||||| || || |||||| ||||||| | Sbjct 1119395 GTCTCTGAGTGAATGTTTTCCATCATGATTTGGAAACCATAAAAACATTTAGCTTCTGGA 1119454 Query 93449 ATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCT 93508 || ||||||||| | || |||| || | ||| ||||| ||||||||||| || || Sbjct 1119455 ATTTGCACTTCTGCACTGAAATTCTCAACTAAATTCTCATTTACTATACCATCAGAGGCA 1119514 Query 93509 GCaaaaaaaGCCAATATATGCTTTAT--AAAATGTTTC-TCATCATCTTTAAGCTTATCC 93565 ||||| || ||||| | | | || ||||| |||| | |||| || | |||| | Sbjct 1119515 GCAAAGAAGGCCAAGACACGGGAGATGAAAAATCTTTCGTTCTCATTCATACGGTTATTC 1119574 Query 93566 CAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCT 93625 ||||| | ||| || || ||||| | |||||| | ||||| ||||| || |||||| Sbjct 1119575 CAATCATGAATATCCTTCGATAGATCAATCTCTTCGGCCGTCCAGAACGAAGCCTCTGCT 1119634 Query 93626 TTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATATGACAAA 93675 | || ||| | ||| || || || |||| ||||| |||| ||||| Sbjct 1119635 CTCTTATACGCTTGCCAAATCTCATGGTATTTGATTGGGAATAGAACAAA 1119684 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556860744313920