Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F001029055.1_202015-06- 17] 8 sequences; 11,524,969 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq8 152 6e-32 >seq8 Length=940994 Score = 152 bits (168), Expect = 6e-32 Identities = 539/840 (64%), Gaps = 14/840 (2%) Strand=Plus/Plus Query 116064 CCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGG 116123 ||||| ||| |||| | |||||||| || ||| || || ||| | || || || Sbjct 324142 CCACAGATCGTACTGCAAAATACCTTGAGAGATTGGAGAACCTTCATAAGTGGAGTAAGG 324201 Query 116124 GCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAA 116183 || || || |||||| || || || || | | ||||| || || || || || Sbjct 324202 TCCATCCTTCTTCGCCAACTCACAGGAGGCTTCCAAAGAAGCGTGGTAGATAGTTTCGAA 324261 Query 116184 AATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAAAATAAA 116243 || | || | ||||||| || | || ||||| | | ||| ||| ||||| Sbjct 324262 GATTTGGATGTTTAGATCCTTGGCTTCTTGAGACTCAAATGGAACACGCAACATCATAAA 324321 Query 116244 TACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCG 116303 || || || | ||| | |||||| || | || || | | |||||||||||| |||| Sbjct 324322 CACGTCAGCCAAACCATTGACACCTAGAGCCATAGGTCTGTTTCTCATATTAGAGTTTCT 324381 Query 116304 AGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAAC 116363 ||| || || || | || | |||||| ||| | || | || |||| ||| Sbjct 324382 AGCTTCAGGAACTGGGTAGTAGTTTCGATCGATGACCTTGTTCAAGTTACGAGTGATAAC 324441 Query 116364 CTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCT---CTTCATTGACATA 116420 ||| | |||| ||| | ||| | ||||| | | | |||| | |||| || | Sbjct 324442 CTTGGCAATTTTATGCAACTTGGCAAAATCATACCACTGGGTCTTACCATCATCAGCA-A 324500 Query 116421 CTT------AGGAAGG----GCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTAT 116470 ||| | || || ||||| || |||| ||||| || | |||||||| Sbjct 324501 CTTGAATACACGATGGTAAAGCGATGGAGGCCAAGTTACAAACGGCAGTCTCATCAGGTG 324560 Query 116471 CAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTT 116530 | | |||||| | ||||| |||||| || || ||||| || ||||||||||||| Sbjct 324561 CTGAGTACTCAACGATTTCACAACACAAGTTAGAGGATTTAATAGTACCCAAGTTCTTTT 324620 Query 116531 GATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTT 116590 | || |||| ||||||| ||||| ||||| ||||| |||| || || ||||| |||| Sbjct 324621 GGTTGCTCTTTATGTTACAGGCATCTTTGTAAAGCATGAATGGGGTACCAGTCTCTGTTT 324680 Query 116591 GGGACTTGAGAATAGCCTTCCATACATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCT 116650 | || | | ||||| | ||| | | ||| | ||| | | || || | Sbjct 324681 GAGATTCCAAGATAGCGTACCACAGTTTTTGAGCTTTGATAGTCTTTCTACCACGACCTT 324740 Query 116651 CCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACCCACAGCCTCTGAGAGCCCTG 116710 | | |||| | || | ||| ||||| || ||||| | | || || | |||| Sbjct 324741 CAGCGACGTAACGTTCATATAAGGCTTCAAATTCATCACCATAAACATCAGACAAACCTG 324800 Query 116711 GTGCCTTATCTGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGA 116770 | || | | |||| |||| | || ||||| |||| ||| | ||| || |||||||| | Sbjct 324801 GAGCTTCACTTGGAGAGAACAAAGTCCATTCACCATTCTCTTGAACACGTTTCATGAACA 324860 Query 116771 GGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGAT 116830 ||||| |||||||| || | ||| | ||| | ||| ||||| | || || | Sbjct 324861 AATCTGGAATCCAGAGGGCTGGGAACAAATCTCTTGCACGAATCTCTTCCTTACCGTGGT 324920 Query 116831 TGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGA 116890 | || | || | || || | ||| || |||||||| ||||||| ||||| |||| Sbjct 324921 TCTTCCGGATATCTATGAAATCAAAGATGTCTGCGTGCCATGGTTCCAAGTACAAAGCGA 324980 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613507138649280