Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F001029055.1_202015-06-
17] 8 sequences; 11,524,969 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq8 201 1e-46
seq1 118 1e-21
>seq8
Length=940994
Score = 201 bits (222), Expect = 1e-46
Identities = 554/845 (66%), Gaps = 18/845 (2%)
Strand=Plus/Plus
Query 106164 CTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAG 106223
|||| ||||| |||||| || |||| || ||||| || || ||||| ||||| |
Sbjct 324211 CTTC-GCCAACTCACAGGAGGCTTCCAAAGAAGCGTGGTAGATAGTTTCGAAGATTTGGA 324269
Query 106224 CATTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCG 106283
|| | ||||||||||| | || ||||||| || ||| ||||| || || |
Sbjct 324270 TGTTTAGATCCTTGGCTTCTTGAGACTCAAATGGAACACGCAACATCATAAACACGTCAG 324329
Query 106284 CGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCT 106343
| | ||| | ||||| | | | |||||||||| || ||||||||| |||| ||
Sbjct 324330 CCAAACCATTGACACCTAGAGCCATAGGTCTGTTTCTCATATTAGAGTTTCTAGCTTCAG 324389
Query 106344 CAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGA 106403
||| || || | |||| || ||||| ||| | || || | || ||| | |
Sbjct 324390 GAACTGGGTAGTAGTTTCGATCGATGACCTTGTTCAAGTTACGAGTGATAACCTTGGCAA 324449
Query 106404 TTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCT------CTTCA-----TTGAC-AT 106451
||| ||| | || || ||||| | | |||| | ||| |||| |
Sbjct 324450 TTTTATGCAACTTGGCAAAATCATACCACTGGGTCTTACCATCATCAGCAACTTGAATAC 324509
Query 106452 ACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACT 106511
|| ||| | ||||| || ||||| || ||||| || |||||||| ||| |||||
Sbjct 324510 ACGATGGTAAAGCGATGGAGGCCAAGTTACAAACGGCAGTCTCATCAGGTGCTGAGTACT 324569
Query 106512 CTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCT 106571
| | ||||| ||||||||| || ||||| || ||||| ||||||||||| ||||
Sbjct 324570 CAACGATTTCACAACACAAGTTAGAGGATTTAATAGTACCCAAGTTCTTTTGGTTGCTCT 324629
Query 106572 TTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGA 106631
|| |||| || ||||| ||||| |||||| | || || || ||||| || || || | |
Sbjct 324630 TTATGTTACAGGCATCTTTGTAAAGCATGAATGGGGTACCAGTCTCTGTTTGAGATTCCA 324689
Query 106632 GAATTGCCTTCCACACATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGT 106691
|| || | ||||| | ||| | | | | | || || || || |||
Sbjct 324690 AGATAGCGTACCACAGTTTTTGAGCTTTGATAGTCTTTCTACCACGACCTTCAGCGACGT 324749
Query 106692 ACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGT 106751
| | || | ||||||||| || ||||| | || || | |||||| || |
Sbjct 324750 AACGTTCATATAAGGCTTCAAATTCATCACCATAAACATCAGACAAACCTGGAGCTTCAC 324809
Query 106752 CTGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAA 106811
|||| |||| | || ||||| |||| ||| | ||| || |||||||| | |||||||
Sbjct 324810 TTGGAGAGAACAAAGTCCATTCACCATTCTCTTGAACACGTTTCATGAACAAATCTGGAA 324869
Query 106812 TCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTA 106871
|||| |||| || || | |||||| ||| |||||| | ||| ||||| || |
Sbjct 324870 TCCAGAGGGCTGGGAACAAATCTCTTGCACGAATCTCTTCCTTACCGTGGTTCTTCCGGA 324929
Query 106872 ACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATC--- 106928
|| | ||| || | ||| || ||||||||||| || | || | |||| || |
Sbjct 324930 TATCTATGAAATCAAAGATGTCTGCGTGCCATGGTTCCAAGTACAAAGCGAAAGCACCTG 324989
Query 106929 -CCTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATT 106987
||||| | ||| |||||| ||||| || || ||| ||| || || || | |||
Sbjct 324990 GCCTTTTG-TTACCACCTTGATCCACATAACGAGCAGTGTTGTTGAAGACACGTACCATG 325048
Query 106988 GGAAT 106992
|| ||
Sbjct 325049 GGGAT 325053
Score = 116 bits (128), Expect = 4e-21
Identities = 184/261 (70%), Gaps = 2/261 (1%)
Strand=Plus/Plus
Query 107051 TGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTT 107110
|| ||||| | |||||||| ||||| ||| || || ||||| ||| | | |||
Sbjct 325649 TGAATGTGTAAACCAATACCACCAGCGGTCTTAGAAATCATAGCACATTCCTTCAAAGTA 325708
Query 107111 CCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGC 107170
| || ||||| | ||| ||||| ||||| ||||||| ||||| || ||||||||
Sbjct 325709 TCGTAAATACCCTCGATGGAGTCATCCTTCATGGCGATTAGGAAACATGAAGACATCTGA 325768
Query 107171 GGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-TGGGA 107229
|| | ||| |||||||||||||| || ||||| | || |||||||| || || |||
Sbjct 325769 GGGCGTGGAGTACCAGCATTGAAAAGAGTTGGAGAAGCATGAATGAA-GTATCTCAAGGA 325827
Query 107230 CATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCAC 107289
|||| | || ||||| | |||| || ||||| || || || || || | || ||
Sbjct 325828 CATCAGATTATAAGTCTCAATAGCAGACTCGATGTCGTCACCATGAATACCAACAGCAAC 325887
Query 107290 ACGCATAAACATGTATTGGGG 107310
| ||||| ||| | ||| ||
Sbjct 325888 TCTCATAATCATATGTTGAGG 325908
Score = 84.2 bits (92), Expect = 3e-11
Identities = 115/161 (71%), Gaps = 0/161 (0%)
Strand=Plus/Minus
Query 155054 TTGCACCACGATCCGGTCTCGCTGTGAAGCATGGTATTCAAGTTGGTGCGGGTGTTATTG 155113
|||| || |||| ||||| || || |||||||| |||||| || || || || | |
Sbjct 488943 TTGCCCCCAGATCTGGTCTAGCAGTCAAGCATGGGATTCAAACCGGCGCTGGAGTGGTCG 488884
Query 155114 ATCCCGACTATACAGGTGAAGTCAAAGTCGTTCTCTTCAATCACGGAGACAAAGACTTTG 155173
|| |||||||| ||||||||||||||||| || || || || |||| || || |
Sbjct 488883 ATAGGGACTATACGGGTGAAGTCAAAGTCGTGCTTTTTAACCATTCTAACAAGGATTTCG 488824
Query 155174 AGGTAAAGAAAGGGGATCGCATCGCACAACTTGTCCTTGAG 155214
|| | || ||||| ||| | | || ||| | |||| |||
Sbjct 488823 AGATTAACAAAGGTGATAGAGTAGCGCAATTGATCCTCGAG 488783
>seq1
Length=1865156
Score = 118 bits (130), Expect = 1e-21
Identities = 273/406 (67%), Gaps = 13/406 (3%)
Strand=Plus/Minus
Query 9282 AAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCT--- 9338
|||||||||||||| |||||||||||| | ||| | ||| | |||||| || |||
Sbjct 583898 AAACCATCCATCTCAACCAAAAGTTGGTTCAAAGTATTTTCTCTTTCATCGTTAGCTCCT 583839
Query 9339 GGCATACCACCAGCACTGCGTTGCTTTCCCACG-GCATCAATCTCATCAATGAAGACAAT 9397
| || || ||| ||||||| ||| |||||||| ||||| |||||||| ||
Sbjct 583838 GAAATGTTGCCCTT-CTGTCTTGCTTTACCAATAGCATCAATTTCATCGATGAAGACCAT 583780
Query 9398 ACATGGTTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCGCCCACACC 9457
| |||| || || | ||| | | || | || || || || || || |||||
Sbjct 583779 AGATGGAGCGTTCTCCCTAGCGGTCTTGAACAAGTCACGCACTCTCGAAGCACCGACACC 583720
Query 9458 AACAAACATCTCCACAAAGTTTGCGG----CGGAACATTGGATGAAGGGGACATTAGATT 9513
|||||||| || ||||| | ||| || |||| | | ||| ||||| || ||
Sbjct 583719 GACAAACATTTCAACAAACT---CGGAACCCGAAACAAAGAA-GAATGGGACTCCAGCTT 583664
Query 9514 CACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGG 9573
|||| ||| |||| || | ||||||||||| |||||||| ||| | ||| | |
Sbjct 583663 CACCAGCAGTGGCCTTAGCCAATAGAGTCTTACCAGTACCTGGAGGACCAGAGAGAATAG 583604
Query 9574 CACCCCGTGGAATCTTGGCGCCACTTCCAAAGTATCTCTCAGGTTGCTTGAGAAAATCCA 9633
|||| | ||||||||| || || || |||||||| ||||| || | ||| |
Sbjct 583603 CACCTCTTGGAATCTTAGCTCCCATTTTTTCGTATCTCTTAGGTTCTTTCAAGAAACTGA 583544
Query 9634 CAATCTCTTCCAATTCATCTTTGGCGGCGTCAATCCCCTCAACATC 9679
| | || | ||| |||||||| ||||| || |||||||
Sbjct 583543 CGAATTCCATAATTTCCTCTTTGGCTTCGTCACAACCGGCAACATC 583498
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589980741001920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |