Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F001029055.1_202015-06- 17] 8 sequences; 11,524,969 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq8 201 1e-46 seq1 118 1e-21 >seq8 Length=940994 Score = 201 bits (222), Expect = 1e-46 Identities = 554/845 (66%), Gaps = 18/845 (2%) Strand=Plus/Plus Query 106164 CTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAG 106223 |||| ||||| |||||| || |||| || ||||| || || ||||| ||||| | Sbjct 324211 CTTC-GCCAACTCACAGGAGGCTTCCAAAGAAGCGTGGTAGATAGTTTCGAAGATTTGGA 324269 Query 106224 CATTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCG 106283 || | ||||||||||| | || ||||||| || ||| ||||| || || | Sbjct 324270 TGTTTAGATCCTTGGCTTCTTGAGACTCAAATGGAACACGCAACATCATAAACACGTCAG 324329 Query 106284 CGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCT 106343 | | ||| | ||||| | | | |||||||||| || ||||||||| |||| || Sbjct 324330 CCAAACCATTGACACCTAGAGCCATAGGTCTGTTTCTCATATTAGAGTTTCTAGCTTCAG 324389 Query 106344 CAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGA 106403 ||| || || | |||| || ||||| ||| | || || | || ||| | | Sbjct 324390 GAACTGGGTAGTAGTTTCGATCGATGACCTTGTTCAAGTTACGAGTGATAACCTTGGCAA 324449 Query 106404 TTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCT------CTTCA-----TTGAC-AT 106451 ||| ||| | || || ||||| | | |||| | ||| |||| | Sbjct 324450 TTTTATGCAACTTGGCAAAATCATACCACTGGGTCTTACCATCATCAGCAACTTGAATAC 324509 Query 106452 ACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACT 106511 || ||| | ||||| || ||||| || ||||| || |||||||| ||| ||||| Sbjct 324510 ACGATGGTAAAGCGATGGAGGCCAAGTTACAAACGGCAGTCTCATCAGGTGCTGAGTACT 324569 Query 106512 CTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCT 106571 | | ||||| ||||||||| || ||||| || ||||| ||||||||||| |||| Sbjct 324570 CAACGATTTCACAACACAAGTTAGAGGATTTAATAGTACCCAAGTTCTTTTGGTTGCTCT 324629 Query 106572 TTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGA 106631 || |||| || ||||| ||||| |||||| | || || || ||||| || || || | | Sbjct 324630 TTATGTTACAGGCATCTTTGTAAAGCATGAATGGGGTACCAGTCTCTGTTTGAGATTCCA 324689 Query 106632 GAATTGCCTTCCACACATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGT 106691 || || | ||||| | ||| | | | | | || || || || ||| Sbjct 324690 AGATAGCGTACCACAGTTTTTGAGCTTTGATAGTCTTTCTACCACGACCTTCAGCGACGT 324749 Query 106692 ACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGT 106751 | | || | ||||||||| || ||||| | || || | |||||| || | Sbjct 324750 AACGTTCATATAAGGCTTCAAATTCATCACCATAAACATCAGACAAACCTGGAGCTTCAC 324809 Query 106752 CTGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAA 106811 |||| |||| | || ||||| |||| ||| | ||| || |||||||| | ||||||| Sbjct 324810 TTGGAGAGAACAAAGTCCATTCACCATTCTCTTGAACACGTTTCATGAACAAATCTGGAA 324869 Query 106812 TCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTA 106871 |||| |||| || || | |||||| ||| |||||| | ||| ||||| || | Sbjct 324870 TCCAGAGGGCTGGGAACAAATCTCTTGCACGAATCTCTTCCTTACCGTGGTTCTTCCGGA 324929 Query 106872 ACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATC--- 106928 || | ||| || | ||| || ||||||||||| || | || | |||| || | Sbjct 324930 TATCTATGAAATCAAAGATGTCTGCGTGCCATGGTTCCAAGTACAAAGCGAAAGCACCTG 324989 Query 106929 -CCTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATT 106987 ||||| | ||| |||||| ||||| || || ||| ||| || || || | ||| Sbjct 324990 GCCTTTTG-TTACCACCTTGATCCACATAACGAGCAGTGTTGTTGAAGACACGTACCATG 325048 Query 106988 GGAAT 106992 || || Sbjct 325049 GGGAT 325053 Score = 116 bits (128), Expect = 4e-21 Identities = 184/261 (70%), Gaps = 2/261 (1%) Strand=Plus/Plus Query 107051 TGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTT 107110 || ||||| | |||||||| ||||| ||| || || ||||| ||| | | ||| Sbjct 325649 TGAATGTGTAAACCAATACCACCAGCGGTCTTAGAAATCATAGCACATTCCTTCAAAGTA 325708 Query 107111 CCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGC 107170 | || ||||| | ||| ||||| ||||| ||||||| ||||| || |||||||| Sbjct 325709 TCGTAAATACCCTCGATGGAGTCATCCTTCATGGCGATTAGGAAACATGAAGACATCTGA 325768 Query 107171 GGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-TGGGA 107229 || | ||| |||||||||||||| || ||||| | || |||||||| || || ||| Sbjct 325769 GGGCGTGGAGTACCAGCATTGAAAAGAGTTGGAGAAGCATGAATGAA-GTATCTCAAGGA 325827 Query 107230 CATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCAC 107289 |||| | || ||||| | |||| || ||||| || || || || || | || || Sbjct 325828 CATCAGATTATAAGTCTCAATAGCAGACTCGATGTCGTCACCATGAATACCAACAGCAAC 325887 Query 107290 ACGCATAAACATGTATTGGGG 107310 | ||||| ||| | ||| || Sbjct 325888 TCTCATAATCATATGTTGAGG 325908 Score = 84.2 bits (92), Expect = 3e-11 Identities = 115/161 (71%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 155054 TTGCACCACGATCCGGTCTCGCTGTGAAGCATGGTATTCAAGTTGGTGCGGGTGTTATTG 155113 |||| || |||| ||||| || || |||||||| |||||| || || || || | | Sbjct 488943 TTGCCCCCAGATCTGGTCTAGCAGTCAAGCATGGGATTCAAACCGGCGCTGGAGTGGTCG 488884 Query 155114 ATCCCGACTATACAGGTGAAGTCAAAGTCGTTCTCTTCAATCACGGAGACAAAGACTTTG 155173 || |||||||| ||||||||||||||||| || || || || |||| || || | Sbjct 488883 ATAGGGACTATACGGGTGAAGTCAAAGTCGTGCTTTTTAACCATTCTAACAAGGATTTCG 488824 Query 155174 AGGTAAAGAAAGGGGATCGCATCGCACAACTTGTCCTTGAG 155214 || | || ||||| ||| | | || ||| | |||| ||| Sbjct 488823 AGATTAACAAAGGTGATAGAGTAGCGCAATTGATCCTCGAG 488783 >seq1 Length=1865156 Score = 118 bits (130), Expect = 1e-21 Identities = 273/406 (67%), Gaps = 13/406 (3%) Strand=Plus/Minus Query 9282 AAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCT--- 9338 |||||||||||||| |||||||||||| | ||| | ||| | |||||| || ||| Sbjct 583898 AAACCATCCATCTCAACCAAAAGTTGGTTCAAAGTATTTTCTCTTTCATCGTTAGCTCCT 583839 Query 9339 GGCATACCACCAGCACTGCGTTGCTTTCCCACG-GCATCAATCTCATCAATGAAGACAAT 9397 | || || ||| ||||||| ||| |||||||| ||||| |||||||| || Sbjct 583838 GAAATGTTGCCCTT-CTGTCTTGCTTTACCAATAGCATCAATTTCATCGATGAAGACCAT 583780 Query 9398 ACATGGTTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCGCCCACACC 9457 | |||| || || | ||| | | || | || || || || || || ||||| Sbjct 583779 AGATGGAGCGTTCTCCCTAGCGGTCTTGAACAAGTCACGCACTCTCGAAGCACCGACACC 583720 Query 9458 AACAAACATCTCCACAAAGTTTGCGG----CGGAACATTGGATGAAGGGGACATTAGATT 9513 |||||||| || ||||| | ||| || |||| | | ||| ||||| || || Sbjct 583719 GACAAACATTTCAACAAACT---CGGAACCCGAAACAAAGAA-GAATGGGACTCCAGCTT 583664 Query 9514 CACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGG 9573 |||| ||| |||| || | ||||||||||| |||||||| ||| | ||| | | Sbjct 583663 CACCAGCAGTGGCCTTAGCCAATAGAGTCTTACCAGTACCTGGAGGACCAGAGAGAATAG 583604 Query 9574 CACCCCGTGGAATCTTGGCGCCACTTCCAAAGTATCTCTCAGGTTGCTTGAGAAAATCCA 9633 |||| | ||||||||| || || || |||||||| ||||| || | ||| | Sbjct 583603 CACCTCTTGGAATCTTAGCTCCCATTTTTTCGTATCTCTTAGGTTCTTTCAAGAAACTGA 583544 Query 9634 CAATCTCTTCCAATTCATCTTTGGCGGCGTCAATCCCCTCAACATC 9679 | | || | ||| |||||||| ||||| || ||||||| Sbjct 583543 CGAATTCCATAATTTCCTCTTTGGCTTCGTCACAACCGGCAACATC 583498 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589980741001920