Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F001029055.1_202015-06-
17] 8 sequences; 11,524,969 total letters
Query= NC_015960.1
Length=175699
Score E
Sequences producing significant alignments: (Bits) Value
seq5 268 1e-66
seq8 120 3e-22
seq1 84.2 2e-11
>seq5
Length=1457367
Score = 268 bits (296), Expect = 1e-66
Identities = 430/611 (70%), Gaps = 19/611 (3%)
Strand=Plus/Plus
Query 18960 ACATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAA 19019
|||||||||||| ||||| || || ||||| | |||||||| |||||||| ||||
Sbjct 1119097 ACATGCAAAATCGGTATGTAAACCTTCATCTCTGCAGATCAATTCGTTAGAAAACGTTAG 1119156
Query 19020 ACCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAA 19079
||| ||||| || ||| | || || |||||||| |||| |||||| || || ||||||||
Sbjct 1119157 ACCTGGCATTAGACCTTTCTTCTTCAACCAGAAGATAGCAGCAAAGGAACCTGAAAAGAA 1119216
Query 19080 TATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATTATG 19139
|||||||| | || ||||||||||| | ||| ||| | | ||| ||| | | ||
Sbjct 1119217 AATACCTTCAATGGCAGCAAAAGCAACCAATCTCTCTGCGAAGATAGATTCACTGTCCTG 1119276
Query 19140 AATCCATTTCAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCTATAGAATT 19199
||||||| | | ||||| || ||||||| ||| | || || | || || | |||
Sbjct 1119277 AATCCATCTGATAGCCCATTCGGCCTTCTCTTTAATCTGAGGAATGTTTTCGATCGCATT 1119336
Query 19200 AAATAGATACATACGC--TCATCTGTATCTTTAACATATGCATCTATCAATAAACTG--- 19254
|| | | | || ||| || | || ||| || | ||| | ||||||| ||| |
Sbjct 1119337 GAACA-AGAAAT-CGCTTTCCTTTGGATCCTTGATATAAG----TATCAATTAACAGGGA 1119390
Query 19255 -TACATTTCTGAATGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTC 19313
|| | ||||| ||||| ||||| || || || || || ||||||||| | |||||
Sbjct 1119391 ATAGGTCTCTGAGTGAATGTTTTCCATCATGATTTGGAAACCATAAAAACATTTAGCTTC 1119450
Query 19314 TGTTATCTGTACTTCACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCACT 19373
|| || || ||||| || || | || || ||||| ||||| ||||| ||||||
Sbjct 1119451 TGGAATTTGCACTTCTGCACTGAAATTCTCAACTAAATTCTCATTTACTATACCATCAGA 1119510
Query 19374 AGCTGCAAAAAATGCTAATACATGTTTAATAAAATGTTTTTC-ATCTGAGGTTAAT---- 19428
|| ||||| || || || ||| | || ||| | |||| ||| | || ||
Sbjct 1119511 GGCAGCAAAGAAGGCCAAGACACGGGAGATGAAAAATCTTTCGTTCTCA--TTCATACGG 1119568
Query 19429 GTATTCCAATCATTAATATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCC 19488
|||||||||||| |||||| || |||| ||| | ||||| | ||||| || ||||||
Sbjct 1119569 TTATTCCAATCATGAATATCCTTCGATAGATCAATCTCTTCGGCCGTCCAGAACGAAGCC 1119628
Query 19489 TCTGCTTTTTTATACATGTTCCATATATCACGATATTGTATAGGAAATATAACAAATCTA 19548
|||||| | |||||| | ||| || ||| | |||| || || |||| ||||||||||
Sbjct 1119629 TCTGCTCTCTTATACGCTTGCCAAATCTCATGGTATTTGATTGGGAATAGAACAAATCTA 1119688
Query 19549 TTTTTATTTTC 19559
||| || ||
Sbjct 1119689 CGTTTGTTCTC 1119699
>seq8
Length=940994
Score = 120 bits (132), Expect = 3e-22
Identities = 324/495 (65%), Gaps = 4/495 (1%)
Strand=Plus/Plus
Query 47956 ATTTGATAGTACCCAAATTTTGATGATTATTNNNNTTGTTACATGCGTCCTTGTAAAGCA 48015
|||| ||||||||||| || | || || | ||||||| || || ||||||||||
Sbjct 324597 ATTTAATAGTACCCAAGTTCTTTTGGTTGCTCTTTATGTTACAGGCATCTTTGTAAAGCA 324656
Query 48016 TAAAAGGTGTTCCAGTTTCTATCTGAGATTCAATGATAGATTTCCAAACAGTCCT--AGC 48073
| || || || ||||| ||| | |||||||| | ||||| | ||| |||| | |||
Sbjct 324657 TGAATGGGGTACCAGTCTCTGTTTGAGATTCCAAGATAGCGTACCA--CAGTTTTTGAGC 324714
Query 48074 CTTTATAACAGCTCTAGCTTTATTATCATGTTCGTATTTAGTATATAACTTCTCAAATTC 48133
|| ||| |||| | | ||| |||| |||||| ||||||||
Sbjct 324715 TTTGATAGTCTTTCTACCACGACCTTCAGCGACGTAACGTTCATATAAGGCTTCAAATTC 324774
Query 48134 ATCCCCATACACATTATCTAACCCAGGACATTCATTAGGACACATCAATGACCAATCCTC 48193
||| ||||| |||| | || || ||| |||| | ||| | | ||| | ||| || |
Sbjct 324775 ATCACCATAAACATCAGACAAACCTGGAGCTTCACTTGGAGAGAACAAAGTCCATTCACC 324834
Query 48194 ATCATTTTTTACTCTAGTCATAAATATATCTGGTATCCAAAGAGCTATAAATAAATCCCT 48253
|| | || || | |||| || | |||||| ||||| || ||| || ||||| ||
Sbjct 324835 ATTCTCTTGAACACGTTTCATGAACAAATCTGGAATCCAGAGGGCTGGGAACAAATCTCT 324894
Query 48254 AGTTCTTAGTTCTTCATTGCCACTATTCCTTTTAAGTTCAAGAAAGTCCATTATATCAGC 48313
| | | ||||| || || ||| | | || | || || | || || ||
Sbjct 324895 TGCACGAATCTCTTCCTTACCGTGGTTCTTCCGGATATCTATGAAATCAAAGATGTCTGC 324954
Query 48314 ATGCCATGGTTCTAAATATATTGCCATTACACCTGGTCGTTTATTACCTCCTTGATCTAT 48373
||||||||||| || || | || | ||||||| | ||| ||||| |||||||| |
Sbjct 324955 GTGCCATGGTTCCAAGTACAAAGCGAAAGCACCTGGCCTTTTGTTACCACCTTGATCCAC 325014
Query 48374 ATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATACCATTTGATATACCATT 48433
||| | ||||| ||||| | || | || ||| |||| | || || || |||| ||
Sbjct 325015 ATAACGAGCAGTGTTGTTGAAGACACGTACCATGGGGATCAACCCGTTCGAAGTACCGTT 325074
Query 48434 GGTTCCCGAAATATA 48448
|| || | ||||||
Sbjct 325075 AGTACCTGCAATATA 325089
Score = 114 bits (126), Expect = 1e-20
Identities = 393/604 (65%), Gaps = 33/604 (5%)
Strand=Plus/Plus
Query 48482 ACCTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTATCATAAATTCC 48541
||| |||||||| || | ||||| || | |||||| || | ||||| ||||| ||
Sbjct 325660 ACCAATACCACCAGCGGTCTTAGAAATCATAGCACATTCCTTCAAAGTATCGTAAATACC 325719
Query 48542 TTCTATACTATCATCTATCATATTTAATAGAAAACAACTAGACATTTGCGGATGACAAGT 48601
|| || ||||| |||| | ||| ||||| |||||| || || | |||
Sbjct 325720 CTCGATGGAGTCATCCTTCATGGCGATTAGGAAACATGAAGACATCTGAGGGCGTGGAGT 325779
Query 48602 TCCTGAATTAAATAATGTTGGAGATGCATGAATAAACCATTTCTCTGATAACAATTTATA 48661
|| | ||| || | |||||||| |||||||| || || || || | || |||||
Sbjct 325780 ACCAGCATTGAAAAGAGTTGGAGAAGCATGAATGAAGTATCTCAAGGACATCAGATTATA 325839
Query 48662 TGTTTCAATAACAGAATCTATATCCCATTGATGTATACCTATAGATACACGCATTAACAT 48721
|| |||||| |||| || || || ||| ||||| | || || | ||| | |||
Sbjct 325840 AGTCTCAATAGCAGACTCGATGTCGTCACCATGAATACCAACAGCAACTCTCATAATCAT 325899
Query 48722 ATATTGAGGTCTTTCAACAATTTTGTTATTTATTTTCAAAAGATATGATTTTTCCAATGT 48781
|| |||||| | |||| | | || |||||| ||| ||||| || |||| ||
Sbjct 325900 ATGTTGAGGACGTTCAGCGACTTCACCATTTATCCTCAGCAGATAAGAACGCTCCAGAGT 325959
Query 48782 TTTAAAACCAAAATAGTTGTA--TGAAAAGTCGTTATCATTAATAATTGATGAATTTATT 48839
||| || |||||||||||| | ||||| || |||||| | ||| | || || |
Sbjct 325960 TTTGAACCCAAAATAGTTGAAGTTGAAA--TCTCTATCATACACAATAGCAGAGTTCAGC 326017
Query 48840 CTTTCCTTATGTTTATATACTACATCCATTACATTTTTTGATATAAT-------TGA--- 48889
||||||||||| | || | ||||| || | || || || || |||
Sbjct 326018 TCATCCTTATGTTTGTTGACAATGTCCATAACCTCTTGCGAGATCATAGGAGAATGAACC 326077
Query 48890 ---TTCCTT--GTAAAGAT-CTTCTACAA--CA-TCACTA------AATAtttttt--tt 48932
||| || || | || || |||| || |||| | || | | ||| |
Sbjct 326078 CCGTTCTTTGGGTTCACATAGTTGAACAATTCACTCACAACCTGAGAAAACTGTTTAGTA 326137
Query 48933 GTTTCTTTATGAAGATTAGATATAGATATTCTAGCAGCTAATATAGCATAATCTGGATGA 48992
|| | || || | |||||| |||| ||||||||| || || |||||||||| |||||
Sbjct 326138 GTCTGCTTGTGCAAATTAGAGATAGCTATTCTAGCGGCCAAAGTAGCATAATCAGGATGC 326197
Query 48993 ATTGTTGTACATGTAC-TAGATATTTCTGCTGCTAATATATCTAATTCTTTAGTAGTTAC 49051
| || || ||| ||| | | |||| || || || | || ||||| |||||| ||
Sbjct 326198 ACAGTCGT-CATATACGCACAAGTTTCAGCAGCCAAATTGTCCAATTCAACAGTAGTCAC 326256
Query 49052 ACCT 49055
||||
Sbjct 326257 ACCT 326260
>seq1
Length=1865156
Score = 84.2 bits (92), Expect = 2e-11
Identities = 182/270 (67%), Gaps = 2/270 (1%)
Strand=Plus/Plus
Query 48116 ATATAACTTCTCAAATTCATCCCCATACACATTATCTAACCCAGGACATTCATTAGGACA 48175
|||||| | |||||||| | || ||||||| || ||||| |||| ||||
Sbjct 1271793 ATATAAGTCATCAAATTCTTTGCCGTACACATCGCATAGTCCAGGGGCCTCATCTGGACT 1271852
Query 48176 CATCAATGACCAATCCTCATCATTTTTTACTCTAGTCATAAATATATCTGGTATCCAAAG 48235
| ||| ||||||| ||| || || | |||| || | || |||||||| ||
Sbjct 1271853 AAACAAACACCAATCGCCATTGGATTCGACCCGCCTCATGAACAGGTCAGGTATCCACAG 1271912
Query 48236 AGCTATAAATAAATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCTTTTAAGTTCAAG 48295
|| | ||| | ||| || | ||| | |||||| || || ||| || ||| | ||
Sbjct 1271913 CGCAAAAAACAGATCTCTGGCTCTCATTTCTTCTTTACCGTGGTTCTTTCGAAGCTGTAG 1271972
Query 48296 AAAGTCCATTATATCAGCATGCCATGGTTCTAAATATATTGCCATTA-CACCTGGTCGTT 48354
||| || | || || ||||||||||| || | ||||| ||| || | | || || | |
Sbjct 1271973 AAAATCAAGGATGTCCGCATGCCATGGCTCGAGATATA-TGCAATAAGCTCCGGGCCTCT 1272031
Query 48355 TATTACCTCCTTGATCTATATATCTGGCAG 48384
| || || || ||||||| |||||| ||||
Sbjct 1272032 TGTTGCCACCCTGATCTACATATCTTGCAG 1272061
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 562108743789120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |