Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F001029055.1_202015-06- 17] 8 sequences; 11,524,969 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq8 120 2e-22 seq1 95.1 6e-15 >seq8 Length=940994 Score = 120 bits (132), Expect = 2e-22 Identities = 164/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 25890 TTGGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAA 25949 ||||| |||| ||| ||| ||| |||| | | ||| | ||| || |||||||||| Sbjct 324810 TTGGAGAGAACAAAGTCCATTCACCATTCTCTTGAACACGTTTCATGAACAAATCTGGAA 324869 Query 25950 TCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTA 26009 |||| | || || |||||||| || | || ||||| || ||||| ||||| | Sbjct 324870 TCCAGAGGGCTGGGAACAAATCTCTTGCACGAATCTCTTCCTTACCGTGGTTCTTCCGGA 324929 Query 26010 GATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCTT 26069 ||||| ||||||||| || |||| |||||||||||| || || | ||| ||| |||| Sbjct 324930 TATCTATGAAATCAAAGATGTCTGCGTGCCATGGTTCCAAGTACAAAGCGAAAGCACCTG 324989 Query 26070 TTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAAC 26118 ||||| ||||||||||| || || | ||||| | ||||| || Sbjct 324990 GCCTTTTGTTACCACCTTGATCCACATAACGAGCAGTGTTGTTGAAGAC 325038 >seq1 Length=1865156 Score = 95.1 bits (104), Expect = 6e-15 Identities = 121/164 (74%), Gaps = 2/164 (1%) Strand=Plus/Plus Query 25943 TCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTC 26002 || || ||||||| ||| |||| | |||||| ||||||||||||||||| ||||| ||| Sbjct 1271899 TCAGGTATCCACAGCGCAAAAAACAGATCTCTGGCTCTCATTTCTTCTTTACCGTGGTTC 1271958 Query 26003 TTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAA-A 26061 ||| || | || ||||||| || || | |||||||| || | ||| || |||| | Sbjct 1271959 TTTCGAAGCTGTAGAAAATCAAGGATGTCCGCATGCCATGGCTCGAGATATAT-GCAATA 1272017 Query 26062 ACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAG 26105 | || || || ||||| |||||||| |||||||||| Sbjct 1272018 AGCTCCGGGCCTCTTGTTGCCACCCTGATCTACATATCTTGCAG 1272061 Score = 84.2 bits (92), Expect = 1e-11 Identities = 84/109 (77%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 25013 ATAAATTCTCCAGACAAAACTCTTCTTATTGATAAGTTTGAAGTGAATGGTTCAAAACAT 25072 ||| |||| ||| ||||||||||| | ||| ||| ||||| | ||| || || || Sbjct 1270804 ATATATTCCCCACTTAAAACTCTTCTCGTGTATACGTTAGAAGTCATTGGCTCGAACGAT 1270863 Query 25073 TCATTATTTCCTAAGATTTGAGAAGTAGATGCTGTTGGCATTAATGCTA 25121 ||| | ||||| || ||||||||||| ||||| ||||||||| ||||| Sbjct 1270864 TCAGTGTTTCCCAATATTTGAGAAGTGGATGCCGTTGGCATTGGTGCTA 1270912 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253039975328600