Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F001029055.1_202015-06- 17] 8 sequences; 11,524,969 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq1 107 2e-18 >seq1 Length=1865156 Score = 107 bits (118), Expect = 2e-18 Identities = 269/399 (67%), Gaps = 15/399 (4%) Strand=Plus/Minus Query 138183 ACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGT 138242 |||| |||||| | | | ||||| ||||| ||||| |||||| || ||||| || Sbjct 1588580 ACACAGATAGGAGCACCCGCTGGACCACCACCACCATGAGGAATAGCAAAAGTCTTGTGC 1588521 Query 138243 AAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCA 138302 ||||| | |||||| || ||||| ||| |||| ||| | || || || ||||| Sbjct 1588520 AAATTCAAATGACAAACGTCTGCGCCAAGATCACCTGGCGAAGTTAACCCAACTTGTGCG 1588461 Query 138303 TTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACATATC 138362 || | || ||||| || | || || |||||||||| | |||||| | || | | Sbjct 1588460 TTCATGTTAGCACCGTCCAAGTAGACTTGACCACCATATTGATGAACCAACTCGAAGGCC 1588401 Query 138363 TGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCATAATACATGAG 138422 | | ||| | |||||| | ||||| ||| ||||||||||| ||||||| || Sbjct 1588400 TCT-TGAACACAGGTTCAAACAGACCATAAGTGGATGGATATGTGATCATAA---CTG-C 1588346 Query 138423 AGTTCAAATGTAT-TCATGATT-----GCTTTCTTCTCTAGATCTTTGATGTCTATGTTG 138476 || | |||| | | ||||| || |||| | ||||| || || | |||| | Sbjct 1588345 AGCT-AAATCTTTCTCATGCTTACGCACCTTTGCT-TCTAGGTCCTTTAGATCTAAGGAA 1588288 Query 138477 CCATCATCAT-CACACTTGACACCTACAACTTTCATTCCTGCCATGACTGCACTAGCAGG 138535 ||||| | || ||| || || ||| |||||||| || ||| |||| |||||| Sbjct 1588287 CCATC-TGATAAACAGTTCACGGGTACCACTTTCATACCGCACATAGCTGCTGAAGCAGG 1588229 Query 138536 ATTAGTTCCATGTGCTGACTCTGGTATCAGACATACATT 138574 || || |||||||| || |||| || | ||| || || Sbjct 1588228 GTTTGTACCATGTGCCGAGACTGGAATTAAACAAACGTT 1588190 Score = 105 bits (116), Expect = 8e-18 Identities = 205/303 (68%), Gaps = 0/303 (0%) Strand=Plus/Minus Query 139238 AATTCTTCTTGCTATAGCATGTAGTCCATCTGCACCATGATATGCTGCATAGAATCCAGA 139297 |||||| |||| ||| | | | ||||| | ||||||||| | || ||| | | | Sbjct 1587091 AATTCTCTTTGCAATATCTTTCAAACCATCAGGACCATGATAAACCGCGTAGTTTGCTGC 1587032 Query 139298 CATATTTGCGAGCAGTGCTTGTGCTGTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAAT 139357 | || || | | || || || ||||| |||||| || || ||||| | | | || Sbjct 1587031 AACGTTAGCCAATAACGCCTGGGCGGTGCAAATGTTAGAAGTAGCCTTGTCACGTTTGAT 1586972 Query 139358 ATGCTGCTCTCTAGTTTGTAGTGCTAATCTGTATGCAGGATTGCCTTCGCTGTCCACTGA 139417 ||| || ||||||||||| | || ||||| | || | || ||| | ||| || Sbjct 1586971 ATGTTGTTCTCTAGTTTGCAAAGCCAATCTTAAAGCTGTCTTTCCTAGACGATCCTTGGA 1586912 Query 139418 CTGACCTACAATTCTGCCAGGTATCTTTCTCTTATACTTGTCTGTTGTTGCAAAGAATGC 139477 ||| |||||||| ||||| |||||||| || | ||| | | ||||| || Sbjct 1586911 GACACCGACAATTCTACCAGGAATCTTTCTGTTCAAAGAGTCGATCACCGAGAAGAAAGC 1586852 Query 139478 AGCATGAGGACCTCCGTATCCCATAGGAATACCAAACCTTTGCATACTACCTACAGCAAT 139537 || || ||||| ||||| |||||||||| |||||| |||||| | ||| | | |||| Sbjct 1586851 CGCGTGTGGACCACCGTAGCCCATAGGAACACCAAATCTTTGCGTGGAACCCAAAACAAT 1586792 Query 139538 ATC 139540 ||| Sbjct 1586791 ATC 1586789 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578998342100160