Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F001029055.1_202015-06- 17] 8 sequences; 11,524,969 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq8 201 1e-46 >seq8 Length=940994 Score = 201 bits (222), Expect = 1e-46 Identities = 555/845 (66%), Gaps = 18/845 (2%) Strand=Plus/Minus Query 75530 ATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAAGCGGGGCGTCGC 75589 || || ||| | || || || ||| ||| || || ||||| |||||| | || | Sbjct 325053 ATCCCCATGGTACGTGTCTTCAACAACACTGCTCGTTATGTGGATCAAG-GTGGTAACAA 324995 Query 75590 AAGG---GGTCCAT-CGCGGTCTACTTGGAACCATGGCATGCCGATATCATGGAGTTCCT 75645 |||| ||| | | ||| | ||||||||||||||||| || || ||| | || ||| | Sbjct 324994 AAGGCCAGGTGCTTTCGCTTTGTACTTGGAACCATGGCACGCAGACATCTTTGATTTCAT 324935 Query 75646 TGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTGTAGAGATCTCTTTTCATCCCT 75705 || | || ||||| ||| | |||||| ||| |||||| | || || |||| Sbjct 324934 AGATATCCGGAAGAACCACGGTAAGGAAGAGATTCGTGCAAGAGATTTGTTCCCAGCCCT 324875 Query 75706 GTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGGTGGTCAATGGTCTCTTTTCTG 75765 ||||||||||| | |||||||| || ||| | ||| |||| ||||| || | |||| Sbjct 324874 CTGGATTCCAGATTTGTTCATGAAACGTGTTCAAGAGAATGGTGAATGGACTTTGTTCTC 324815 Query 75766 TCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTGAGGAGTTTGAAGCCCTCTACAC 75825 |||| | || |||||| | || || | ||||| || ||||||||| | || Sbjct 324814 TCCAAGTGAAGCTCCAGGTTTGTCTGATGTTTATGGTGATGAATTTGAAGCCTTATATGA 324755 Query 75826 AAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGTACCAGCCGCCGATGTTTGGAAGGC 75885 | || | | || ||| | | | |||| | ||| | | ||| | || Sbjct 324754 ACGTTACGTCGCTGAAGGTCGTGGTAGAAAGACTATCAAAGCTCAAAAACTGTGGTACGC 324695 Query 75886 TATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGATGCTTGTAA 75945 ||| | |||| || || |||||||| || |||| ||||||||||| ||||| ||||| Sbjct 324694 TATCTTGGAATCTCAAACAGAGACTGGTACCCCATTCATGCTTTACAAAGATGCCTGTAA 324635 Query 75946 CAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGCACGGAAAT 76005 || ||||| ||||||||||| ||||| || || || ||| || | || ||||| Sbjct 324634 CATAAAGAGCAACCAAAAGAACTTGGGTACTATTAAATCCTCTAACTTGTGTTGTGAAAT 324575 Query 76006 TTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCATCAATCGCCCTTCC 76065 | |||||| ||| |||||||| || ||||| || ||||| || ||||| | || Sbjct 324574 CGTTGAGTACTCAGCACCTGATGAGACTGCCGTTTGTAACTTGGCCTCCATCGCTTTACC 324515 Query 76066 AAAGTAT-GTCAA-----TGAAG------AGACTCGCACTTTTGATTATGAAAAACTTCA 76113 | || | |||| ||| | |||| | | ||||| || || | || Sbjct 324514 ATCGTGTATTCAAGTTGCTGATGATGGTAAGACCCAGTGGTATGATTTTGCCAAGTTGCA 324455 Query 76114 TGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACAGAAATTTTTATCC 76173 | |||| | ||| || | || || | ||| ||||| || |||| | || || Sbjct 324454 TAAAATTGCCAAGGTTATCACTCGTAACTTGAACAAGGTCATCGATCGAAACTACTACCC 324395 Query 76174 CGTTGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTGGTTTGGGTGTTCAAGG 76233 ||| || |||| ||||||||| || |||||||||| | | | ||||| | || Sbjct 324394 AGTTCCTGAAGCTAGAAACTCTAATATGAGAAACAGACCTATGGCTCTAGGTGTCAATGG 324335 Query 76234 TCTCGCGGATGTATTTATTTTGTGCCGCTACGCATTTGATTCAGATGAAGCCAAGGAGAT 76293 | | || || || ||||| ||| || ||||||| || | ||||||||||| | Sbjct 324334 TTTGGCTGACGTGTTTATGATGTTGCGTGTTCCATTTGAGTCTCAAGAAGCCAAGGATCT 324275 Query 76294 GAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGAGGCGAGTTGTGAATTGGC 76353 || | ||||| ||||| || || ||||| || |||| || ||||| ||||| Sbjct 324274 AAACATCCAAATCTTCGAAACTATCTACCACGCTTCTTTGGAAGCCTCCTGTGAGTTGGC 324215 Query 76354 TGAAG 76358 |||| Sbjct 324214 -GAAG 324211 Score = 109 bits (120), Expect = 7e-19 Identities = 177/252 (70%), Gaps = 2/252 (1%) Strand=Plus/Minus Query 75221 ATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTCTTGGAGACA 75280 ||| | ||| | || || | || || || || || ||||| || |||| | ||||| Sbjct 325899 ATGATTATGAGAGTTGCTGTTGGTATTCATGGTGACGACATCGAGTCTGCTATTGAGACT 325840 Query 75281 TACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTTCAATGCTGG 75339 || | ||||||| || || |||||||| || | ||||| || ||||||||||| Sbjct 325839 TATAATCTGATGTCCTTGAGATAC-TTCATTCATGCTTCTCCAACTCTTTTCAATGCTGG 325781 Query 75340 TACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATCAA 75399 ||| ||| | || |||||||| || ||||| ||||||| ||||| ||||| ||| | Sbjct 325780 TACTCCACGCCCTCAGATGTCTTCATGTTTCCTAATCGCCATGAAGGATGACTCCATCGA 325721 Query 75400 CGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTGG 75459 ||||| || | ||| | | ||| ||||| || || ||| ||||| |||||||| Sbjct 325720 GGGTATTTACGATACTTTGAAGGAATGTGCTATGATTTCTAAGACCGCTGGTGGTATTGG 325661 Query 75460 GATGCACATCCA 75471 | ||||| || Sbjct 325660 TTTACACATTCA 325649 Score = 84.2 bits (92), Expect = 3e-11 Identities = 115/161 (71%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 27861 CTCAAGGACAAGTTGTGCGATGCGATCCCCTTTCTTTACCTCAAAGTCTTTGTCTCCGTG 27920 ||| |||| | ||| || | | ||| ||||| || | ||| || || |||| || Sbjct 488783 CTCGAGGATCAATTGCGCTACTCTATCACCTTTGTTAATCTCGAAATCCTTGTTAGAATG 488842 Query 27921 ATTGAAGAGAACGACTTTGACTTCACCTGTATAGTCGGGATCAATAACACCCGCACCAAC 27980 || || || ||||||||||||||||| |||||||| ||| | || || || || Sbjct 488843 GTTAAAAAGCACGACTTTGACTTCACCCGTATAGTCCCTATCGACCACTCCAGCGCCGGT 488902 Query 27981 TTGAATACCATGCTTCACAGCGAGACCGGATCGTGGTGCAA 28021 |||||| |||||||| || || ||||| |||| || |||| Sbjct 488903 TTGAATCCCATGCTTGACTGCTAGACCAGATCTGGGGGCAA 488943 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596569540343040