Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F001029055.1_202015-06-
17] 8 sequences; 11,524,969 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq8 201 1e-46
>seq8
Length=940994
Score = 201 bits (222), Expect = 1e-46
Identities = 555/845 (66%), Gaps = 18/845 (2%)
Strand=Plus/Minus
Query 75530 ATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAAGCGGGGCGTCGC 75589
|| || ||| | || || || ||| ||| || || ||||| |||||| | || |
Sbjct 325053 ATCCCCATGGTACGTGTCTTCAACAACACTGCTCGTTATGTGGATCAAG-GTGGTAACAA 324995
Query 75590 AAGG---GGTCCAT-CGCGGTCTACTTGGAACCATGGCATGCCGATATCATGGAGTTCCT 75645
|||| ||| | | ||| | ||||||||||||||||| || || ||| | || ||| |
Sbjct 324994 AAGGCCAGGTGCTTTCGCTTTGTACTTGGAACCATGGCACGCAGACATCTTTGATTTCAT 324935
Query 75646 TGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTGTAGAGATCTCTTTTCATCCCT 75705
|| | || ||||| ||| | |||||| ||| |||||| | || || ||||
Sbjct 324934 AGATATCCGGAAGAACCACGGTAAGGAAGAGATTCGTGCAAGAGATTTGTTCCCAGCCCT 324875
Query 75706 GTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGGTGGTCAATGGTCTCTTTTCTG 75765
||||||||||| | |||||||| || ||| | ||| |||| ||||| || | ||||
Sbjct 324874 CTGGATTCCAGATTTGTTCATGAAACGTGTTCAAGAGAATGGTGAATGGACTTTGTTCTC 324815
Query 75766 TCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTGAGGAGTTTGAAGCCCTCTACAC 75825
|||| | || |||||| | || || | ||||| || ||||||||| | ||
Sbjct 324814 TCCAAGTGAAGCTCCAGGTTTGTCTGATGTTTATGGTGATGAATTTGAAGCCTTATATGA 324755
Query 75826 AAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGTACCAGCCGCCGATGTTTGGAAGGC 75885
| || | | || ||| | | | |||| | ||| | | ||| | ||
Sbjct 324754 ACGTTACGTCGCTGAAGGTCGTGGTAGAAAGACTATCAAAGCTCAAAAACTGTGGTACGC 324695
Query 75886 TATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGATGCTTGTAA 75945
||| | |||| || || |||||||| || |||| ||||||||||| ||||| |||||
Sbjct 324694 TATCTTGGAATCTCAAACAGAGACTGGTACCCCATTCATGCTTTACAAAGATGCCTGTAA 324635
Query 75946 CAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGCACGGAAAT 76005
|| ||||| ||||||||||| ||||| || || || ||| || | || |||||
Sbjct 324634 CATAAAGAGCAACCAAAAGAACTTGGGTACTATTAAATCCTCTAACTTGTGTTGTGAAAT 324575
Query 76006 TTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCATCAATCGCCCTTCC 76065
| |||||| ||| |||||||| || ||||| || ||||| || ||||| | ||
Sbjct 324574 CGTTGAGTACTCAGCACCTGATGAGACTGCCGTTTGTAACTTGGCCTCCATCGCTTTACC 324515
Query 76066 AAAGTAT-GTCAA-----TGAAG------AGACTCGCACTTTTGATTATGAAAAACTTCA 76113
| || | |||| ||| | |||| | | ||||| || || | ||
Sbjct 324514 ATCGTGTATTCAAGTTGCTGATGATGGTAAGACCCAGTGGTATGATTTTGCCAAGTTGCA 324455
Query 76114 TGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACAGAAATTTTTATCC 76173
| |||| | ||| || | || || | ||| ||||| || |||| | || ||
Sbjct 324454 TAAAATTGCCAAGGTTATCACTCGTAACTTGAACAAGGTCATCGATCGAAACTACTACCC 324395
Query 76174 CGTTGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTGGTTTGGGTGTTCAAGG 76233
||| || |||| ||||||||| || |||||||||| | | | ||||| | ||
Sbjct 324394 AGTTCCTGAAGCTAGAAACTCTAATATGAGAAACAGACCTATGGCTCTAGGTGTCAATGG 324335
Query 76234 TCTCGCGGATGTATTTATTTTGTGCCGCTACGCATTTGATTCAGATGAAGCCAAGGAGAT 76293
| | || || || ||||| ||| || ||||||| || | ||||||||||| |
Sbjct 324334 TTTGGCTGACGTGTTTATGATGTTGCGTGTTCCATTTGAGTCTCAAGAAGCCAAGGATCT 324275
Query 76294 GAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGAGGCGAGTTGTGAATTGGC 76353
|| | ||||| ||||| || || ||||| || |||| || ||||| |||||
Sbjct 324274 AAACATCCAAATCTTCGAAACTATCTACCACGCTTCTTTGGAAGCCTCCTGTGAGTTGGC 324215
Query 76354 TGAAG 76358
||||
Sbjct 324214 -GAAG 324211
Score = 109 bits (120), Expect = 7e-19
Identities = 177/252 (70%), Gaps = 2/252 (1%)
Strand=Plus/Minus
Query 75221 ATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTCTTGGAGACA 75280
||| | ||| | || || | || || || || || ||||| || |||| | |||||
Sbjct 325899 ATGATTATGAGAGTTGCTGTTGGTATTCATGGTGACGACATCGAGTCTGCTATTGAGACT 325840
Query 75281 TACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTTCAATGCTGG 75339
|| | ||||||| || || |||||||| || | ||||| || |||||||||||
Sbjct 325839 TATAATCTGATGTCCTTGAGATAC-TTCATTCATGCTTCTCCAACTCTTTTCAATGCTGG 325781
Query 75340 TACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATCAA 75399
||| ||| | || |||||||| || ||||| ||||||| ||||| ||||| ||| |
Sbjct 325780 TACTCCACGCCCTCAGATGTCTTCATGTTTCCTAATCGCCATGAAGGATGACTCCATCGA 325721
Query 75400 CGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTGG 75459
||||| || | ||| | | ||| ||||| || || ||| ||||| ||||||||
Sbjct 325720 GGGTATTTACGATACTTTGAAGGAATGTGCTATGATTTCTAAGACCGCTGGTGGTATTGG 325661
Query 75460 GATGCACATCCA 75471
| ||||| ||
Sbjct 325660 TTTACACATTCA 325649
Score = 84.2 bits (92), Expect = 3e-11
Identities = 115/161 (71%), Gaps = 0/161 (0%)
Strand=Plus/Plus
Query 27861 CTCAAGGACAAGTTGTGCGATGCGATCCCCTTTCTTTACCTCAAAGTCTTTGTCTCCGTG 27920
||| |||| | ||| || | | ||| ||||| || | ||| || || |||| ||
Sbjct 488783 CTCGAGGATCAATTGCGCTACTCTATCACCTTTGTTAATCTCGAAATCCTTGTTAGAATG 488842
Query 27921 ATTGAAGAGAACGACTTTGACTTCACCTGTATAGTCGGGATCAATAACACCCGCACCAAC 27980
|| || || ||||||||||||||||| |||||||| ||| | || || || ||
Sbjct 488843 GTTAAAAAGCACGACTTTGACTTCACCCGTATAGTCCCTATCGACCACTCCAGCGCCGGT 488902
Query 27981 TTGAATACCATGCTTCACAGCGAGACCGGATCGTGGTGCAA 28021
|||||| |||||||| || || ||||| |||| || ||||
Sbjct 488903 TTGAATCCCATGCTTGACTGCTAGACCAGATCTGGGGGCAA 488943
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596569540343040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |