Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F001029055.1_202015-06-
17] 8 sequences; 11,524,969 total letters
Query= NC_021248.1
Length=307691
Score E
Sequences producing significant alignments: (Bits) Value
seq5 109 1e-18
>seq5
Length=1457367
Score = 109 bits (120), Expect = 1e-18
Identities = 374/590 (63%), Gaps = 3/590 (1%)
Strand=Plus/Plus
Query 49823 ACATGCAAAATCAGTATGTAAACCCTCGTCCCTAGATATAAATTCATTACTAAAAGTTAA 49882
|||||||||||| ||||||||||| || || || | || ||||| ||| ||| ||||
Sbjct 1119097 ACATGCAAAATCGGTATGTAAACCTTCATCTCTGCAGATCAATTCGTTAGAAAACGTTAG 1119156
Query 49883 TCCTGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAGAA 49942
|||||||||| ||| |||| || | ||| || || | ||||| || ||||||||
Sbjct 1119157 ACCTGGCATTAGACCTTTCTTCTTCAACCAGAAGATAGCAGCAAAGGAACCTGAAAAGAA 1119216
Query 49943 TATACCCTCGACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTATCATCTAA 50002
||||| || | ||||| || | | ||| || | || || ||| | ||
Sbjct 1119217 AATACCTTCAATGGCAGCAAAAGCAACCAATCTCTCTGCGAAGATAGATTCACTGTCCTG 1119276
Query 50003 TATCCAATTTATAGCCCAATCTGCtttttttttGATAGAAGGTATATTTTCTATAGCTTT 50062
||||| | |||||||| || || || | ||| || ||| || ||||| || || ||
Sbjct 1119277 AATCCATCTGATAGCCCATTCGGCCTTCTCTTTAATCTGAGGAATGTTTTCGATCGCATT 1119336
Query 50063 AAATAATTCAtttttttCATNNNNNNNNNNNNNNNNNNNNNNNATTAATAAAGAATACAT 50122
|| || || |||| | ||||| | ||||| |
Sbjct 1119337 GAACAAGAAATCGCTTTCCTTTGGATCCTTGATATAAGTATCAATTAACAGGGAATAGGT 1119396
Query 50123 TTCAGAATGTACAGCTTCCATAGCTATTTGAAATGAATAAAATTGTCTTGCTTCTGAATA 50182
|| || || | |||||| ||||| || |||||| | | ||||||| |
Sbjct 1119397 CTCTGAGTGAATGTTTTCCATCATGATTTGGAAACCATAAAAACATTTAGCTTCTGGAAT 1119456
Query 50183 CTGAACTTCGGAAAAGAATCGTTCAACTAAATTCTCAGATACAATACCATCAGATGCTGC 50242
|| ||||| | | ||| ||||||||||||||| ||| ||||||||||| || ||
Sbjct 1119457 TTGCACTTCTGCACTGAAATTCTCAACTAAATTCTCATTTACTATACCATCAGAGGCAGC 1119516
Query 50243 GAAGAATGCTAAAACGTATTTAATAAAATGTTTTTCATTATCTTTTAAA---TTTTCCCA 50299
||||| || || || || ||| | |||| || || || | | || | |||
Sbjct 1119517 AAAGAAGGCCAAGACACGGGAGATGAAAAATCTTTCGTTCTCATTCATACGGTTATTCCA 1119576
Query 50300 AGATTCAAGATCGTTTGATAAATCTACTTCTTCTATTGTCCAAAATGATGCTACGGATTT 50359
| | || ||| || |||| ||| | ||||| ||||| || || || | | | |
Sbjct 1119577 ATCATGAATATCCTTCGATAGATCAATCTCTTCGGCCGTCCAGAACGAAGCCTCTGCTCT 1119636
Query 50360 TTTATACATTTGATATATATCAAAATGTTCAATGGGAAATAGTACATATC 50409
|||||| ||| | || ||| | || || || ||||| ||| |||
Sbjct 1119637 CTTATACGCTTGCCAAATCTCATGGTATTTGATTGGGAATAGAACAAATC 1119686
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 984479899090800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |