Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F001029055.1_202015-06-
17] 8 sequences; 11,524,969 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq8 125 2e-23
seq1 123 7e-23
seq3 93.3 1e-13
seq5 87.8 5e-12
>seq8
Length=940994
Score = 125 bits (138), Expect = 2e-23
Identities = 243/355 (68%), Gaps = 4/355 (1%)
Strand=Plus/Plus
Query 156147 ATATGCGAACCAGATGAGCGAACATTATGAATATGTAGTCCAATACCACCTGACCATTTA 156206
|||| ||||||| || |||| || ||||| |||| ||||||||||| | |||
Sbjct 325622 ATATATGAACCAGTAGAACGAATGTTGTGAATGTGTAAACCAATACCACCAGCGGTCTTA 325681
Query 156207 GAAATTTGAGCGCATTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCATT 156266
||||| ||| |||||||| | ||||| | ||||||| || || || ||||| | |||
Sbjct 325682 GAAATCATAGCACATTCCTTCAAAGTATCGTAAATACCCTCGATGGAGTCATCCTTCATG 325741
Query 156267 GATAGTAGATAGCACGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGT 156326
| | ||| | || ||| | ||||| ||||| || ||||| ||||| || || ||
Sbjct 325742 GCGATTAGGAAACATGAAGACATCTGAGGGCGTGGAGTACCAGCATTGAAAAGAGTTGGA 325801
Query 156327 GTTGCATGAATAAAATACTTATTAGACATATAATCGTATGTCTCCTTAATCTTCTCAAGA 156386
| |||||||| || || | ||||| || || ||||| || ||| ||
Sbjct 325802 GAAGCATGAATGAAGTATCTCAAGGACATCAGATTATAAGTCTCAATAGCAGACTC--GA 325859
Query 156387 T-TAGAC-CCGTGAATACAGATAGAGACCCTCATCCACATATGCTGAGGACGCTCTACAA 156444
| | | | || ||||||| | || || ||||| |||||| |||||||| || | |
Sbjct 325860 TGTCGTCACCATGAATACCAACAGCAACTCTCATAATCATATGTTGAGGACGTTCAGCGA 325919
Query 156445 TCACTCCATCAATTCGCAGAAGGTATGCGCGTTCCAGAGTTTTAAACCCGAAATA 156499
| |||| || | ||| || || | || ||||||||||| ||||| |||||
Sbjct 325920 CTTCACCATTTATCCTCAGCAGATAAGAACGCTCCAGAGTTTTGAACCCAAAATA 325974
Score = 100 bits (110), Expect = 8e-16
Identities = 155/221 (70%), Gaps = 3/221 (1%)
Strand=Plus/Plus
Query 155979 CCGTGATTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATAC 156038
||||| |||||||| | |||| ||| || || || | || ||| |||| |||
Sbjct 324914 CCGTGGTTCTTCCGGATATCTATGAAATCAAAGATGTCTGCGTGCCATGGTTCCAAGTAC 324973
Query 156039 ATAGCAAAACTACCATTCCTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTG 156095
| ||| ||| ||| ||| ||| ||||| ||||| ||||| |||||||| || |||
Sbjct 324974 AAAGCGAAAGCACCTGGCCTTTTGTTACCACCTTGATCCACATAACGAGCAGTGTTGTTG 325033
Query 156096 AAGACACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAA 156155
||||||| || ||| || || | || || ||||| || || || || ||||| |||
Sbjct 325034 AAGACACGTACCATGGGGATCAACCCGTTCGAAGTACCGTTAGTACCTGCAATATATGAA 325093
Query 156156 CCAGATGAGCGAACATTATGAATATGTAGTCCAATACCACC 156196
|| | || |||| || || || || | |||||||||||
Sbjct 325094 CCCGTAGAACGAATGTTGTGTATGTGCAAACCAATACCACC 325134
Score = 95.1 bits (104), Expect = 4e-14
Identities = 267/409 (65%), Gaps = 6/409 (1%)
Strand=Plus/Minus
Query 288938 TAAATCCATCCATACTTGTTAAAATTTGATTAAGTGTTTGTTCCCTTTCATCATTTGAAC 288997
|||| |||||||| ||| | |||||| | || |||||||||||| || ||||
Sbjct 494618 TAAAACCATCCATTTCAACTAACAATTGATTCAAAGTGGCTTCCCTTTCATCGTTAGAAC 494559
Query 288998 CTC---TTGAATCACCCGAATCGCTCCtttttttACCAACAGCATCAATTTCGTCAATGA 289054
| | | | | |||| | | || || ||||| | ||||||||||| |||| ||
Sbjct 494558 CACCCATGGCACCACCTTTACCTCT---TTCCTTACCGATTGCATCAATTTCATCAACGA 494502
Query 289055 AAATCACACACGGAGAATTTTGTCTCGCAATTGCAAATAATTCTCTTACACGGGATGCTC 289114
| || | | || | ||| ||| | | | || | || | || | || || |
Sbjct 494501 AGATGATTGAAGGTGCCATTTTTCTACCTTGTTCGAAAAGATCACGAACTCTAGACGCAC 494442
Query 289115 CAAGACCAACATACATTTCTACAAATTCAGAAGCGGATACTTGAATGAATGTTACATTTG 289174
| | ||| ||| |||||||||||||||||||| | || || | |||| |||| ||
Sbjct 494441 CCACACCGACAAACATTTCTACAAATTCAGAACCAGAGACAGACAAAAATGGTACACCTG 494382
Query 289175 CTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCCCTCTAATA 289234
|||| || || |||| | |||| | ||||||||||| |||||||| ||| ||| |
Sbjct 494381 CTTCACCAGCAGTTGCCTTTGCCAATAAAGTCTTACCTGTACCAGGTGGACCCGATAAGA 494322
Query 289235 GAACTCCCTTTGGTACTTTTGCCCCAGCAGACTTATATTTCTCAGGGCTCTTTAAAAATT 289294
| || || | || ||||| | | ||||| |||||| |||| || || |
Sbjct 494321 TGGCACCACGAGGAATCTTGGCCCCGAGTGCTGTGTATTTGTCAGGGTTCTTCAAGAAAT 494262
Query 289295 CTACAATTTCCTCAAGTTCATATTTTGCCTCATCACATCCTGCTACATC 289343
|||| |||| || || | || || || | ||| ||||| || ||
Sbjct 494261 GAACAAATTCCATAATCTCCTGCTTCGCTTCGTTACAACCTGCAACGTC 494213
>seq1
Length=1865156
Score = 123 bits (136), Expect = 7e-23
Identities = 343/513 (67%), Gaps = 20/513 (4%)
Strand=Plus/Plus
Query 251485 GCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGA 251544
||||| |||| |||||||||||||| |||||||||||||| | ||||||||||| | |
Sbjct 832628 GCACCATGTGCGATCATACAATCACGTTCCATTTCACCGAATCTGAGACCACCATCTCTA 832687
Query 251545 GCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGATGGAGCGGCTATGT 251604
| |||||||| | ||||| | || | | ||||||||| |||| ||
Sbjct 832688 GATCTACCCTCAACTGGCTGCCTTGTCAAAACTTGCATAGGACCAC--GAGCT-CTCGCG 832744
Query 251605 TG---CTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAAGATG 251661
|| ||| |||| ||||| || | ||||| |||||| | | ||||||| ||||||
Sbjct 832745 TGAATCTTGTCATCCACCATGTGTCTTAGACGTTGGTAGTACGTAGGACCGAAGAAGAT- 832803
Query 251662 CTCGAAGGCATTTGCTCT---CCAGTTAGAGCGTTATACATAACTTCGTTTCCATTAGAT 251718
| || | ||| || | ||||| | | || ||||| |||||| ||| ||||
Sbjct 832804 -TTGA-GCCATCAACTTTTTACCAGTATGTCCATTGTACATGACTTCGAAACCACGAGAT 832861
Query 251719 TCATAACCAAGTTTCTGTAGCTCTGAAGCAATATCACCAATCTTGAATTTGCTAAAACTG 251778
| ||||||| | | |||| || |||| | | | | | | | | || ||
Sbjct 832862 TGATAACCATGCTCACGTAGAAGCTTAGAAATACCTTCCACAGTAATGTCGGTGAA--TG 832919
Query 251779 GTGC--CGTCTCCGTAAAGACCCATTTGAATCAAC-ACTTTGCCTAAAAGTGTCTCTTTC 251835
| | |||| || | ||| | | | | | ||||| | | || || |
Sbjct 832920 GAGATGCGTCACCTTCGTTACC-AGATAATGCTGCCACTTTACTAAGTAGACATTCGATT 832978
Query 251836 AGTTGGGCGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTC 251895
| || |||| ||||||||| ||||| || |||||||||||||| | || |||
Sbjct 832979 AAATGCGCGACCGTCATACGAGATGGAATGGCGTGGGGATTGATGATTAGATCTGGTACA 833038
Query 251896 AGTCCATCAGCAGTGAAGGGCATATCCTTTTCCTCAATAA-TGTTTCCAATAGTTCCCTT 251954
| || ||||||||||| ||||||||| | || | ||| || | |||||||| || ||
Sbjct 833039 ATACCTTCAGCAGTGAATGGCATATCC-TCTCTACCGTAAGTGATACCAATAGTACCTTT 833097
Query 251955 TTGTCCGTGACGAGAACTGAACTTATCACCAAT 251987
||| ||||||||||| |||||| ||||||||
Sbjct 833098 TTGACCGTGACGAGAGGCGAACTTGTCACCAAT 833130
Score = 84.2 bits (92), Expect = 6e-11
Identities = 179/262 (68%), Gaps = 9/262 (3%)
Strand=Plus/Plus
Query 156011 AATATCAGGATGGTGTGGCTCCAGATACATAGCAAAA--CTACCATTCC--TCTTGCCAC 156066
|||||| | ||| |||||| ||||| || |||| | || | || | |||||||
Sbjct 1272162 AATATCCGCATGCCATGGCTCGAGATAAAT-GCAATAAGCTCCGGGTCTCTTGTTGCCAC 1272220
Query 156067 CCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAATAATACCATTGG 156126
||||||||||||| | ||||| |||||||| || | ||||| |||| | || |||
Sbjct 1272221 CCTGATCTACATATCTTGCAGTGTTATTGAAAACGCGAAGCATTGGAACCAAGCCGCTGG 1272280
Query 156127 AAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACATTATGAATATGTAGTC 156186
| |||||| | || ||| ||| ||| ||| | || || || ||| || |
Sbjct 1272281 ACACACCATTGCTACCTGATATAAGCGCCCCATTTGATCTAATGTTGGAAACATGAAGGC 1272340
Query 156187 CAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTT--ACAGTATTGAAAATACC 156244
||||||||||||| ||| |||| | | || || | | | || |||||||||||
Sbjct 1272341 CAATACCACCTGAAGCTTTGGAAA--TCATGGCTGTCTTGTGAAGTGTCTTGAAAATACC 1272398
Query 156245 TTCAATAGAATCATCTTCCATT 156266
|| ||||| || ||| ||||
Sbjct 1272399 ATCTATAGAGTCCTCTATCATT 1272420
>seq3
Length=1635806
Score = 93.3 bits (102), Expect = 1e-13
Identities = 98/129 (76%), Gaps = 0/129 (0%)
Strand=Plus/Plus
Query 302552 TATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAG 302611
|||| ||| || ||| || ||||||| | ||| | | ||||||||||||||||||||
Sbjct 495084 TATCGTAATGAACCATGATATCTTCCAGAGCCTTAACAAGACGACGCTGAATATAACCAG 495143
Query 302612 TTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGA 302671
| | ||| || ||||| ||||| || | ||| ||||||||||||| || |||||||
Sbjct 495144 TCTCGGCTGTCTTGACAGCGGTATCGATCAAACCTTCACGACCACCCATTGCGTGGAAGA 495203
Query 302672 ATAGCTCTT 302680
| | ||||
Sbjct 495204 AGAATTCTT 495212
>seq5
Length=1457367
Score = 87.8 bits (96), Expect = 5e-12
Identities = 90/117 (77%), Gaps = 3/117 (3%)
Strand=Plus/Minus
Query 301815 AATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCAAA 301874
|||||| | ||||| |||||||| | || ||||| | | || ||||||||||||||
Sbjct 479502 AATTTCCTTGATACGAGGAACACCCAGTGTAACGTT---CATCGAAGCAACACCAGCAAA 479446
Query 301875 GTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAAT 301931
||| ||||| |||| ||| | ||||||| |||||||||||| ||| || ||||
Sbjct 479445 GTGAAAAGTTTTCAAAGTCATTTGAGTACCAGGCTCACCAATAGATTGAGCACCAAT 479389
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471817449138696
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |