Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F001029055.1_202015-06- 17] 8 sequences; 11,524,969 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq8 143 6e-29 seq5 132 1e-25 >seq8 Length=940994 Score = 143 bits (158), Expect = 6e-29 Identities = 273/398 (69%), Gaps = 7/398 (2%) Strand=Plus/Minus Query 110592 ATTTCTAAAAACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCA 110651 |||||||| | | |||| || |||||| | ||| | || | ||||| || | || || Sbjct 325149 ATTTCTAAGACCGCTGGTGGTATTGGTTTGCACATACACAACATTCGTTCTACGGGTTCA 325090 Query 110652 AATATCGCAACAGCGAAGGGTGCTTC-AACTGGACTTGTTCCA-ATGTTAAGAGTCTTCA 110709 |||| ||| | || ||| |||| ||| || ||| ||| ||| || | ||||||| Sbjct 325089 TATATTGCAGGTACTAACGGTACTTCGAACGGG--TTGATCCCCATGGTACGTGTCTTCA 325032 Query 110710 ACGACACTGCAAAATATGTGAATCAAGGTGGTAAGAGAAAT---GGCTCATTTGCTATCT 110766 || ||||||| |||||| ||||||||||||| | || || | || ||| | | Sbjct 325031 ACAACACTGCTCGTTATGTGGATCAAGGTGGTAACAAAAGGCCAGGTGCTTTCGCTTTGT 324972 Query 110767 ATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGAT 110826 | | ||||| ||||| |||| || ||||| ||| |||| | || || || || || Sbjct 324971 ACTTGGAACCATGGCACGCAGACATCTTTGATTTCATAGATATCCGGAAGAACCACGGTA 324912 Query 110827 TTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGA 110886 ||||| | ||| | ||||| || || | |||||| ||||||| ||||||| Sbjct 324911 AGGAAGAGATTCGTGCAAGAGATTTGTTCCCAGCCCTCTGGATTCCAGATTTGTTCATGA 324852 Query 110887 AACGTGTTCAAGAAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCTCCTGGTCTAT 110946 ||||||||||||| ||||| ||| || | | | ||| | |||| ||| | | Sbjct 324851 AACGTGTTCAAGAGAATGGTGAATGGACTTTGTTCTCTCCAAGTGAAGCTCCAGGTTTGT 324792 Query 110947 CTGATGTATATGGAAAAGAGTTTGAAGACCTTTACGAA 110984 ||||||| ||||| | || ||||||| | | || ||| Sbjct 324791 CTGATGTTTATGGTGATGAATTTGAAGCCTTATATGAA 324754 Score = 136 bits (150), Expect = 9e-27 Identities = 246/357 (69%), Gaps = 2/357 (1%) Strand=Plus/Minus Query 110302 ACTATTTTGGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGTCAATGGCGAGATCA 110361 |||||||||| ||||||||||| || ||| ||||| | || | | ||||| || || Sbjct 325976 ACTATTTTGGGTTCAAAACTCTGGAGCGTTCTTATCTGCTGAGGATAAATGGTGAAGTCG 325917 Query 110362 TTGAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATTA 110421 ||||||||||||||| ||| || | | ||||| ||||||||||||| | || || Sbjct 325916 CTGAACGTCCTCAACATATGATTATGAGAGTTGCTGTTGGTATTCATGGTGACGACATCG 325857 Query 110422 AAGCTGTTATTGAATGTTATGATGT-ATTAAGTAAAAAGAAAGCTATTCATGCTACTCCT 110480 | ||| |||||| |||| || | || | | | | | ||||||||| |||| Sbjct 325856 AGTCTGCTATTGAGACTTATAATCTGATGTCCTTGAGATACTTC-ATTCATGCTTCTCCA 325798 Query 110481 ACCCTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTCTAGGAATT 110540 || || || || || || ||| | || || |||| || || || | | || Sbjct 325797 ACTCTTTTCAATGCTGGTACTCCACGCCCTCAGATGTCTTCATGTTTCCTAATCGCCATG 325738 Query 110541 AACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGCTCTTATTTCTAAA 110600 || ||||| || || || |||||||| ||| || | || ||| |||| | |||||||| Sbjct 325737 AAGGATGACTCCATCGAGGGTATTTACGATACTTTGAAGGAATGTGCTATGATTTCTAAG 325678 Query 110601 AACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATC 110657 | | |||| || |||||| | ||| |||| | ||||| || | || || ||||| Sbjct 325677 ACCGCTGGTGGTATTGGTTTACACATTCACAACATTCGTTCTACTGGTTCATATATC 325621 >seq5 Length=1457367 Score = 132 bits (146), Expect = 1e-25 Identities = 384/585 (66%), Gaps = 17/585 (3%) Strand=Plus/Minus Query 131432 CTATTTCCAATTAAACATCACGATGTTTTCGATATGTATAAGAAATCTGTTGCGGCCTTC 131491 ||||| ||||| ||| | || || ||| | |||||||| | | | || | ||| Sbjct 1119678 CTATTCCCAATCAAATACCATGAGATTTGGCAAGCGTATAAGAGAGCAGAGGCTTCGTTC 1119619 Query 131492 TGGACTGTTGAAGAGATCGATATGACCAAAGATATTGATGATTGGGAAAAATTAACCT-T 131550 ||||| | |||||||| ||| | | || |||||| |||||||| ||| | | | | Sbjct 1119618 TGGACGGCCGAAGAGATTGATCTATCGAAGGATATTCATGATTGG----AATAACCGTAT 1119563 Query 131551 GAATGAAAA----AGATTTTGTTTCCAAAGT-TCTTG-CATTCTTCGCCGGAAGTGATGG 131604 |||||| || ||||||| || || ||||| | ||||| || | |||||| Sbjct 1119562 GAATGAGAACGAAAGATTTTTCATCTCCCGTGTCTTGGCCTTCTTTGCTGCCTCTGATGG 1119503 Query 131605 CATTGTTATTGAAAATCTTGTTATTAATTTCATTCAAGAAATTGATATTCCTGAAGTAAC 131664 || || | ||| ||| | ||| ||||||| | |||| | | ||||| |||| | Sbjct 1119502 TATAGTAAATGAGAATTTAGTTGAGAATTTCAGTGCAGAAGTGCAAATTCCAGAAGCTAA 1119443 Query 131665 ATCGTTCTACACATTTCAAGCCGCTGTTGAATCTATTCATAGCGAGATGTATTCATTATT 131724 || || || || ||| | | ||| ||||| |||| ||||| | || Sbjct 1119442 ATGTTTTTATGGTTTCCAAATCATGATGGAAAACATTCACTCAGAGACCTATTCCCTGTT 1119383 Query 131725 GATTGAGAGTCTTGTTAAAAATGAAGATGATAAAAATAAATTATTTGATGCTGTAAATAA 131784 ||||| | | | | || || | | || | || || || |||| | | || Sbjct 1119382 AATTGATACTTATATCAAGGATCCAAAGGAAAGCGATTTCTTGTTCAATGCGATCGAAAA 1119323 Query 131785 ATTTCCTGCAATTAAAAAGAAAGCAGAATGGGCTATTAAATGGATTCAAGA---TGATTC 131841 ||||| |||||| |||| || ||||||||||| | ||||||||| || ||| || Sbjct 1119322 CATTCCTCAGATTAAAGAGAAGGCCGAATGGGCTATCAGATGGATTCAGGACAGTGAATC 1119263 Query 131842 CGCTAATTTTTCTACAAGACTTGTAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTCAGG 131901 || || | ||| | || ||||||||| |||||||||| ||||||||||| Sbjct 1119262 ---TATCTTCGCAGAGAGATTGGTTGCTTTTGCTGCCATTGAAGGTATTTTCTTTTCAGG 1119206 Query 131902 TGCTTTCTGTGCTATCTTTTGGCTTAAGAAGCGTGGATTGATGCCTGGACTCTCATTGTC 131961 | | || ||||||||| ||| | |||||| || | ||||| || || | || || Sbjct 1119205 TTCCTTTGCTGCTATCTTCTGGTTGAAGAAGAAAGGTCTAATGCCAGGTCTAACGTTTTC 1119146 Query 131962 CAATCAATTCATCTCGAGAGATGAAGCATTGCATACTGAATTTGC 132006 || |||| |||| |||||||||| || ||||| || ||||| Sbjct 1119145 TAACGAATTGATCTGCAGAGATGAAGGTTTACATACCGATTTTGC 1119101 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186812678351688