Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F001029055.1_202015-06-
17] 8 sequences; 11,524,969 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq8 143 6e-29
seq5 132 1e-25
>seq8
Length=940994
Score = 143 bits (158), Expect = 6e-29
Identities = 273/398 (69%), Gaps = 7/398 (2%)
Strand=Plus/Minus
Query 110592 ATTTCTAAAAACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCA 110651
|||||||| | | |||| || |||||| | ||| | || | ||||| || | || ||
Sbjct 325149 ATTTCTAAGACCGCTGGTGGTATTGGTTTGCACATACACAACATTCGTTCTACGGGTTCA 325090
Query 110652 AATATCGCAACAGCGAAGGGTGCTTC-AACTGGACTTGTTCCA-ATGTTAAGAGTCTTCA 110709
|||| ||| | || ||| |||| ||| || ||| ||| ||| || | |||||||
Sbjct 325089 TATATTGCAGGTACTAACGGTACTTCGAACGGG--TTGATCCCCATGGTACGTGTCTTCA 325032
Query 110710 ACGACACTGCAAAATATGTGAATCAAGGTGGTAAGAGAAAT---GGCTCATTTGCTATCT 110766
|| ||||||| |||||| ||||||||||||| | || || | || ||| | |
Sbjct 325031 ACAACACTGCTCGTTATGTGGATCAAGGTGGTAACAAAAGGCCAGGTGCTTTCGCTTTGT 324972
Query 110767 ATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGAT 110826
| | ||||| ||||| |||| || ||||| ||| |||| | || || || || ||
Sbjct 324971 ACTTGGAACCATGGCACGCAGACATCTTTGATTTCATAGATATCCGGAAGAACCACGGTA 324912
Query 110827 TTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGA 110886
||||| | ||| | ||||| || || | |||||| ||||||| |||||||
Sbjct 324911 AGGAAGAGATTCGTGCAAGAGATTTGTTCCCAGCCCTCTGGATTCCAGATTTGTTCATGA 324852
Query 110887 AACGTGTTCAAGAAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCTCCTGGTCTAT 110946
||||||||||||| ||||| ||| || | | | ||| | |||| ||| | |
Sbjct 324851 AACGTGTTCAAGAGAATGGTGAATGGACTTTGTTCTCTCCAAGTGAAGCTCCAGGTTTGT 324792
Query 110947 CTGATGTATATGGAAAAGAGTTTGAAGACCTTTACGAA 110984
||||||| ||||| | || ||||||| | | || |||
Sbjct 324791 CTGATGTTTATGGTGATGAATTTGAAGCCTTATATGAA 324754
Score = 136 bits (150), Expect = 9e-27
Identities = 246/357 (69%), Gaps = 2/357 (1%)
Strand=Plus/Minus
Query 110302 ACTATTTTGGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGTCAATGGCGAGATCA 110361
|||||||||| ||||||||||| || ||| ||||| | || | | ||||| || ||
Sbjct 325976 ACTATTTTGGGTTCAAAACTCTGGAGCGTTCTTATCTGCTGAGGATAAATGGTGAAGTCG 325917
Query 110362 TTGAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATTA 110421
||||||||||||||| ||| || | | ||||| ||||||||||||| | || ||
Sbjct 325916 CTGAACGTCCTCAACATATGATTATGAGAGTTGCTGTTGGTATTCATGGTGACGACATCG 325857
Query 110422 AAGCTGTTATTGAATGTTATGATGT-ATTAAGTAAAAAGAAAGCTATTCATGCTACTCCT 110480
| ||| |||||| |||| || | || | | | | | ||||||||| ||||
Sbjct 325856 AGTCTGCTATTGAGACTTATAATCTGATGTCCTTGAGATACTTC-ATTCATGCTTCTCCA 325798
Query 110481 ACCCTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTCTAGGAATT 110540
|| || || || || || ||| | || || |||| || || || | | ||
Sbjct 325797 ACTCTTTTCAATGCTGGTACTCCACGCCCTCAGATGTCTTCATGTTTCCTAATCGCCATG 325738
Query 110541 AACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGCTCTTATTTCTAAA 110600
|| ||||| || || || |||||||| ||| || | || ||| |||| | ||||||||
Sbjct 325737 AAGGATGACTCCATCGAGGGTATTTACGATACTTTGAAGGAATGTGCTATGATTTCTAAG 325678
Query 110601 AACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATC 110657
| | |||| || |||||| | ||| |||| | ||||| || | || || |||||
Sbjct 325677 ACCGCTGGTGGTATTGGTTTACACATTCACAACATTCGTTCTACTGGTTCATATATC 325621
>seq5
Length=1457367
Score = 132 bits (146), Expect = 1e-25
Identities = 384/585 (66%), Gaps = 17/585 (3%)
Strand=Plus/Minus
Query 131432 CTATTTCCAATTAAACATCACGATGTTTTCGATATGTATAAGAAATCTGTTGCGGCCTTC 131491
||||| ||||| ||| | || || ||| | |||||||| | | | || | |||
Sbjct 1119678 CTATTCCCAATCAAATACCATGAGATTTGGCAAGCGTATAAGAGAGCAGAGGCTTCGTTC 1119619
Query 131492 TGGACTGTTGAAGAGATCGATATGACCAAAGATATTGATGATTGGGAAAAATTAACCT-T 131550
||||| | |||||||| ||| | | || |||||| |||||||| ||| | | | |
Sbjct 1119618 TGGACGGCCGAAGAGATTGATCTATCGAAGGATATTCATGATTGG----AATAACCGTAT 1119563
Query 131551 GAATGAAAA----AGATTTTGTTTCCAAAGT-TCTTG-CATTCTTCGCCGGAAGTGATGG 131604
|||||| || ||||||| || || ||||| | ||||| || | ||||||
Sbjct 1119562 GAATGAGAACGAAAGATTTTTCATCTCCCGTGTCTTGGCCTTCTTTGCTGCCTCTGATGG 1119503
Query 131605 CATTGTTATTGAAAATCTTGTTATTAATTTCATTCAAGAAATTGATATTCCTGAAGTAAC 131664
|| || | ||| ||| | ||| ||||||| | |||| | | ||||| |||| |
Sbjct 1119502 TATAGTAAATGAGAATTTAGTTGAGAATTTCAGTGCAGAAGTGCAAATTCCAGAAGCTAA 1119443
Query 131665 ATCGTTCTACACATTTCAAGCCGCTGTTGAATCTATTCATAGCGAGATGTATTCATTATT 131724
|| || || || ||| | | ||| ||||| |||| ||||| | ||
Sbjct 1119442 ATGTTTTTATGGTTTCCAAATCATGATGGAAAACATTCACTCAGAGACCTATTCCCTGTT 1119383
Query 131725 GATTGAGAGTCTTGTTAAAAATGAAGATGATAAAAATAAATTATTTGATGCTGTAAATAA 131784
||||| | | | | || || | | || | || || || |||| | | ||
Sbjct 1119382 AATTGATACTTATATCAAGGATCCAAAGGAAAGCGATTTCTTGTTCAATGCGATCGAAAA 1119323
Query 131785 ATTTCCTGCAATTAAAAAGAAAGCAGAATGGGCTATTAAATGGATTCAAGA---TGATTC 131841
||||| |||||| |||| || ||||||||||| | ||||||||| || ||| ||
Sbjct 1119322 CATTCCTCAGATTAAAGAGAAGGCCGAATGGGCTATCAGATGGATTCAGGACAGTGAATC 1119263
Query 131842 CGCTAATTTTTCTACAAGACTTGTAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTCAGG 131901
|| || | ||| | || ||||||||| |||||||||| |||||||||||
Sbjct 1119262 ---TATCTTCGCAGAGAGATTGGTTGCTTTTGCTGCCATTGAAGGTATTTTCTTTTCAGG 1119206
Query 131902 TGCTTTCTGTGCTATCTTTTGGCTTAAGAAGCGTGGATTGATGCCTGGACTCTCATTGTC 131961
| | || ||||||||| ||| | |||||| || | ||||| || || | || ||
Sbjct 1119205 TTCCTTTGCTGCTATCTTCTGGTTGAAGAAGAAAGGTCTAATGCCAGGTCTAACGTTTTC 1119146
Query 131962 CAATCAATTCATCTCGAGAGATGAAGCATTGCATACTGAATTTGC 132006
|| |||| |||| |||||||||| || ||||| || |||||
Sbjct 1119145 TAACGAATTGATCTGCAGAGATGAAGGTTTACATACCGATTTTGC 1119101
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1186812678351688
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |