Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F001029055.1_202015-06- 17] 8 sequences; 11,524,969 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq5 255 8e-63 seq8 230 3e-55 >seq5 Length=1457367 Score = 255 bits (282), Expect = 8e-63 Identities = 410/584 (70%), Gaps = 20/584 (3%) Strand=Plus/Plus Query 39631 ATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTAGACC 39690 ||||| || |||||||| | || |||||||||||||| || || || ||||||||||| Sbjct 1119112 ATGTAAACCTTCATCTCTGCAGATCAATTCGTTAGAAAACGTTAGACCTGGCATTAGACC 1119171 Query 39691 ACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTACTGC 39750 ||| || | ||| || || |||||||| || || |||||||| || ||||| | || Sbjct 1119172 TTTCTTCTTCAACCAGAAGATAGCAGCAAAGGAACCTGAAAAGAAAATACCTTCAATGGC 1119231 Query 39751 TGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCA---TTATGTATCCACTTCTG--T 39805 ||||| ||||| | ||||||| || | | | ||| | || ||||| |||| Sbjct 1119232 AGCAAAAGCAACCAATCTCTCTGCGAAGATAGATTCACTGTCCTGAATCCA--TCTGATA 1119289 Query 39806 GCCCAATCAGCTTTCTTCTTTACAC-AAGGCATTGTTTCTATAGCATTAAAGAGATAATG 39864 ||||| || || ||| |||||| | ||| || |||| || ||||| || | ||| Sbjct 1119290 GCCCATTCGGCCTTC-TCTTTAATCTGAGGAATGTTTTCGATCGCATTGAACAAGAAATC 1119348 Query 39865 TTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACATTTCTGAATGGAT 39924 |||| | ||| || | ||| ||||| |||||||| ||| | ||||| || || Sbjct 1119349 GCTTTCCTTTGGATCCTTGATATAAGTATCAATTAACAGGGAATAGGTCTCTGAGTGAAT 1119408 Query 39925 GTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTGTACCTCTGA 39984 |||||| ||| || || || || ||||||||| | ||||| | |||||| || |||| Sbjct 1119409 GTTTTCCATCATGATTTGGAAACCATAAAAACATTTAGCTTCTGGAATTTGCACTTCTGC 1119468 Query 39985 ACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCAAAAAATGCCAA 40044 || || | || | ||||| ||||| ||||| |||||| || ||||| || ||||| Sbjct 1119469 ACTGAAATTCTCAACTAAATTCTCATTTACTATACCATCAGAGGCAGCAAAGAAGGCCAA 1119528 Query 40045 TACATGTTTAATAAAATATTTTTCATCGGGTGTCAAT-------TTATTCCAGTCATTGA 40097 ||| | || ||| || |||| | | ||| | |||||||| |||| | Sbjct 1119529 GACACGGGAGATGAAAAATCTTTC----GTTCTCATTCATACGGTTATTCCAATCATGAA 1119584 Query 40098 TATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTTGTACA 40157 |||| || |||| ||| | ||||| || ||||| ||||| |||||||| | || ||| Sbjct 1119585 TATCCTTCGATAGATCAATCTCTTCGGCCGTCCAGAACGAAGCCTCTGCTCTCTTATACG 1119644 Query 40158 TGTTCCATATATCACGATATTGTATTGGAAAAATAACAAATCTA 40201 | ||| || ||| | |||| ||||| || | |||||||||| Sbjct 1119645 CTTGCCAAATCTCATGGTATTTGATTGGGAATAGAACAAATCTA 1119688 >seq8 Length=940994 Score = 230 bits (254), Expect = 3e-55 Identities = 492/728 (68%), Gaps = 8/728 (1%) Strand=Plus/Plus Query 69870 TAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATAT 69929 || ||| || || || || | ||||| || | |||||| ||||| || || || || Sbjct 325657 TAAACCAATACCACCAGCGGTCTTAGAAATCATAGCACATTCCTTCAAAGTATCGTAAAT 325716 Query 69930 ACCCTCTATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTAT 69989 |||||| ||| ||||| ||||| | || ||||| |||||| ||| | || Sbjct 325717 ACCCTCGATGGAGTCATCCTTCATGGCGATTAGGAAACATGAAGACATCTGAGGGCGTGG 325776 Query 69990 AGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATT 70049 ||| || ||||| || | || ||||| || ||| |||| || | || | |||||| Sbjct 325777 AGTACCAGCATTGAAAAGAGTTGGAGAAGCATGAATGAAGTATCTCAAGGACATCAGATT 325836 Query 70050 GTATGTTTCAATAGCTGATTCTATATCC-CACTGATGAATTCCTATCGCGACACGCATCA 70108 || || |||||||| || || || || ||| |||||| || | || || | ||| | Sbjct 325837 ATAAGTCTCAATAGCAGACTCGATGTCGTCACC-ATGAATACCAACAGCAACTCTCATAA 325895 Query 70109 ACATATGCTGAGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCA 70168 |||||| ||||| ||||| | || | |||||| ||| ||| || || |||| Sbjct 325896 TCATATGTTGAGGACGTTCAGCGACTTCACCATTTATCCTCAGCAGATAAGAACGCTCCA 325955 Query 70169 GAGTTTTAAACCCAAAATAGTTGTA--TGAAAAGTCTCTTTCGTAAATAATAACAGAATT 70226 ||||||| ||||||||||||||| | ||||| ||||| || || | |||| |||| || Sbjct 325956 GAGTTTTGAACCCAAAATAGTTGAAGTTGAAA--TCTCTATCATACACAATAGCAGAGTT 326013 Query 70227 TAGTTTATCCTTATATTTGGTAACTATATCCATAACAGTAGGTGAGATAATCGGAGATCG 70286 || | |||||||| |||| | || || |||||||| | ||||| || ||||| | Sbjct 326014 CAGCTCATCCTTATGTTTGTTGACAATGTCCATAACCTCTTGCGAGATCATAGGAGAATG 326073 Query 70287 TTTACCATTTTTAGGATTAACATAGTTGAATAAATCTTCCATTACATCACTAAATAGttt 70346 || || || || || ||||||||||| || || || || | | ||| |||| Sbjct 326074 AACCCCGTTCTTTGGGTTCACATAGTTGAACAATTCACTCACAACCTGAGAAAACTGTTT 326133 Query 70347 ttttGTTTCCTTGTGTAAATTTGATATGGCTATTCTGGCTGCTAGAATAGCATAGTCAGG 70406 | || | |||||| ||||| || || |||||||| || || | | ||||||| ||||| Sbjct 326134 AGTAGTCTGCTTGTGCAAATTAGAGATAGCTATTCTAGCGGCCAAAGTAGCATAATCAGG 326193 Query 70407 ATGTTGTGTAGTACAAGTA-GCTGCTATTTCCGCAGCTAACGTATCTAATTCTATAGTTG 70465 ||| || || || || || |||| ||||| || | || ||||| | ||| | Sbjct 326194 ATGCACAGTCGT-CATATACGCACAAGTTTCAGCAGCCAAATTGTCCAATTCAACAGTAG 326252 Query 70466 TAACTCCGTTATATAGCCCTTGAATAACTTTCATGGCTATTTTGATAGGATCTATGAATT 70525 | || || | ||| | || ||| | | || || || | || ||| || | Sbjct 326253 TCACACCTTCATAGACACCAGAAATGATACGCTGGGTGATCTTAACAGCATCAATATGTG 326312 Query 70526 CTGTGTTCAGACCATAACATAATTTTCTAATACGAGATGTAATTTTATCAAACATAACAT 70585 | | || |||||||| ||||| | ||||| | ||||| || || ||| |||||| Sbjct 326313 CAGGGTCTAGACCATAGCATAAACGTGATATACGTGCAGTAATCTTGTCGAACCTAACAT 326372 Query 70586 TCTCCTTA 70593 |||||| Sbjct 326373 GTTCCTTA 326380 Score = 145 bits (160), Expect = 1e-29 Identities = 357/535 (67%), Gaps = 10/535 (2%) Strand=Plus/Plus Query 68370 CAATG-TAAACTGAATGGGTGAGGATGCGGGTTTTGTACGTAGATAGTACATACCGGTTT 68428 ||||| | || ||||| | | || |||| || ||| | || ||||||||||| || | Sbjct 323429 CAATGGTGAATTGAATAGCAGCAGAAGCGGCTTGTGTTCTCAGGTAGTACATACCAGTCT 323488 Query 68429 TCAGACCTAGACTCCATCCGTAGAAATGCATACTTGTTAGTTTGGAATAACTTGGATCGG 68488 ||| ||| |||| ||||||||||||||||| || | ||| | ||||| | Sbjct 323489 TCAAACCCTTCTTCCAACCGTAGAAATGCATACTAGTCAATTTACCCATAGTTGGAGCAC 323548 Query 68489 CTATATGAATATTCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGCCGCCATTT 68548 || ||||| |||| ||||| ||||||||| || | | | ||| || ||||| | Sbjct 323549 GGATGTGAATGTTCAATGATTGGGACTGATCGATGTAAACAGCACGATCAGCTGCCATCT 323608 Query 68549 TTATAATACTCTTTTGAGGAATTTCCCAAATAGTCT--TAAAAATCTGTTTGATATCATC 68606 || ||| | ||||||| |||||||||| ||||| || ||||| || | || | Sbjct 323609 CGATGATAGTTTTTTGAGAGATTTCCCAAACAGTCTTGTACAAATC--CTTTAGTTCTTG 323666 Query 68607 TGGAAGGCTCG---TATTTTGAATGGATCCACCATCGGATATAATTATATTCTTGATCTC 68663 |||| ||| |||||| ||||| ||| ||| | || || | ||| || Sbjct 323667 AGGAATATTCGGTAGATTTTGGATGGAGCCATTATCAGTGATGATGTGTTGCTTCATACT 323726 Query 68664 ATCATTCCACAATTTTCTCTCCGTTAAAACTCTAAGGAGATGCGGATTAACTATTTGAAA 68723 ||||| ||| | | || ||| | | || | | || || || ||||| || Sbjct 323727 ATCATCCCAGATACCTAGGTCGACCAAATCACGTAGCAAGTAAGGGTTGACAATTTGGAA 323786 Query 68724 TTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATT 68783 ||| || |||||||| | ||||| ||| ||||| || ||||| || | | | || || Sbjct 323787 TTCACCGGATAACACACGACGAGAGTACATATTGGAAGTGTATGGCTCGAAACACTCGTT 323846 Query 68784 ATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACTATTTCT 68843 | || ||||| || | ||| || ||||||||||| || |||| | ||| ||||| Sbjct 323847 GTAACCTAGAATCTGGGAAGTCGACGCAGTTGGCATTGGGGCCAATAGCAAAGAGTTTCT 323906 Query 68844 AAGACCATGTGTTATGAT-TTTATCTTTTAGATGTTTCCAATCCCAAAGATCAGA 68897 || ||||| | |||| || |||| | || | ||||||||| ||||| || Sbjct 323907 AACACCATATTCCTTGATGCTTTTCTTCAAAGTG-TCCCAATCCCATAGATCCGA 323960 Score = 116 bits (128), Expect = 5e-21 Identities = 325/496 (66%), Gaps = 6/496 (1%) Strand=Plus/Plus Query 69347 ATTTGATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAA 69406 |||| ||||| |||| || | || || |||||| |||||||||| || |||||||| | Sbjct 324597 ATTTAATAGTACCCAAGTTCTTTTGGTTGCTCTTTATGTTACAGGCATCTTTGTAAAGCA 324656 Query 69407 TAAACGGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACCCTAGCAT 69466 | || || |||||||| || | |||||||| | |||| | ||| | ||| | Sbjct 324657 TGAATGGGGTACCAGTCTCTGTTTGAGATTCCAAGATAGCGTACCACAGTTTTTGAGCTT 324716 Query 69467 TTATTACGGTCTTG-TAACGCTTC--TCTTTTTCATATTGTGTATATAGCCGTTCGAATT 69523 | || ||||| || | | | || | || || ||||| ||| |||| Sbjct 324717 TGATA---GTCTTTCTACCACGACCTTCAGCGACGTAACGTTCATATAAGGCTTCAAATT 324773 Query 69524 CATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGACCACACAT 69583 |||| || |||||||| ||| || ||| |||| ||||| | | ||| | ||| || Sbjct 324774 CATCACCATAAACATCAGACAAACCTGGAGCTTCACTTGGAGAGAACAAAGTCCATTCAC 324833 Query 69584 CATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTC 69643 ||| || | ||| |||||||| || | ||| |||||||| || ||| || | ||||| Sbjct 324834 CATTCTCTTGAACACGTTTCATGAACAAATCTGGAATCCAGAGGGCTGGGAACAAATCTC 324893 Query 69644 TGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAG 69703 | | | | | ||||| || || || || | ||| | || || | || || | Sbjct 324894 TTGCACGAATCTCTTCCTTACCGTGGTTCTTCCGGATATCTATGAAATCAAAGATGTCTG 324953 Query 69704 AATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTA 69763 ||||||||||| | || | || | | || || | ||| || || || ||||| | Sbjct 324954 CGTGCCATGGTTCCAAGTACAAAGCGAAAGCACCTGGCCTTTTGTTACCACCTTGATCCA 325013 Query 69764 TGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCAT 69823 || | |||||||| || |||| | | ||| || || | || || || |||| | Sbjct 325014 CATAACGAGCAGTGTTGTTGAAGACACGTACCATGGGGATCAACCCGTTCGAAGTACCGT 325073 Query 69824 TTGTTCCAGAAATATA 69839 | || || | |||||| Sbjct 325074 TAGTACCTGCAATATA 325089 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686908731309120