Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F001029055.1_202015-06-
17] 8 sequences; 11,524,969 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq5 199 3e-46
seq2 96.9 3e-15
>seq5
Length=1457367
Score = 199 bits (220), Expect = 3e-46
Identities = 405/593 (68%), Gaps = 10/593 (2%)
Strand=Plus/Minus
Query 43696 TAGGTTTGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACA 43755
||| ||||| | || ||||| |||| ||||| || |||||| ||| || | |||| |
Sbjct 1119688 TAGATTTGTTCTATTCCCAATCAAATACCATGAGATTTGGCAAGCGTATAAGAGAGCAGA 1119629
Query 43756 GGCGTCATTTTGGACAGCAGAAGAAGTTGATTTGACTAAAGACTTAGCACATTGGATTG- 43814
||| || || ||||| || ||||| ||||| | | || || | |||||| |
Sbjct 1119628 GGCTTCGTTCTGGACGGCCGAAGAGATTGATCTATCGAAGGATATTCATGATTGGAATAA 1119569
Query 43815 -CATTAAAACCACAA-GAAAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAG 43872
| | || | || |||| | ||| || || || ||||| || ||||||||
Sbjct 1119568 CCGTATGAATGAGAACGAAAGATTTTTCATCTCCCGTGTCTTGGCCTTCTTTGCTGCCTC 1119509
Query 43873 CGACGGGATAGTCAATGAAAATTTGGTT-AGTCGGTTTGCGCAAGAAGTTCAATTACCAG 43931
|| || ||||| ||||| ||||| ||| || | | ||| ||||| ||| | ||||
Sbjct 1119508 TGATGGTATAGTAAATGAGAATTTAGTTGAGAATTTCAGTGCA-GAAGTGCAAATTCCAG 1119450
Query 43932 AAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACA 43991
|||| |||||||||||| || ||||| || ||||| ||||| || || | ||
Sbjct 1119449 AAGCTAAATGTTTTTATGGTTTCCAAATCATGATGGAAAACATTCACTCAGAGACCTATT 1119390
Query 43992 GTCTTCTGATAGATACGTACATCAAAGATGGGCACGAGAAGC-ATCGATTGTTTAATGCG 44050
|| | || ||||| || ||||| ||| | || |||| || ||||| ||||||
Sbjct 1119389 CCCTGTTAATTGATACTTATATCAAGGATCCAAAGGA-AAGCGATTTCTTGTTCAATGCG 1119331
Query 44051 ATAGAAACAGTACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGATAAATTCA 44110
|| |||| | ||| ||||||| | || || || ||||| | | |||||| |
Sbjct 1119330 ATCGAAAACATTCCTCAGATTAAAGAGAAGGCCGAATGGGCTATCAGATGGATTCAGGAC 1119271
Query 44111 AATGATTCT---TTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTT 44167
| ||| ||| || | ||| || | || || ||||| | | ||||| |||||||||
Sbjct 1119270 AGTGAATCTATCTTCGCAGAGAGATTGGTTGCTTTTGCTGCCATTGAAGGTATTTTCTTT 1119211
Query 44168 TCAGGATCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACG 44227
||||| || ||||| || || || ||||| ||||| |||| | ||||| || | |||
Sbjct 1119210 TCAGGTTCCTTTGCTGCTATCTTCTGGTTGAAGAAGAAAGGTCTAATGCCAGGTCTAACG 1119151
Query 44228 TTTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTG 44280
||||| || || || || | | |||||||| |||||| ||||||||| ||
Sbjct 1119150 TTTTCTAACGAATTGATCTGCAGAGATGAAGGTTTACATACCGATTTTGCATG 1119098
>seq2
Length=1777742
Score = 96.9 bits (106), Expect = 3e-15
Identities = 294/448 (66%), Gaps = 31/448 (7%)
Strand=Plus/Plus
Query 40845 GGATTACAAGATAGGGATGAAGGTGATCTTGGTCCTGTTTATGGATTTCAGTCGCGACAT 40904
||||| || || || ||| || ||| | || || |||||||||||||| | | | |||
Sbjct 558736 GGATTGCACGAGAGACGTGAGGGAGATTTGGGGCCGGTTTATGGATTTCAATGGAGGCAT 558795
Query 40905 TTTGGAGCAAAATAT--GACA--CTATGTACTCTGATTATACCAATAAAGGAATGGATCA 40960
||||| || ||||| |||| | ||| || || || || ||||| | |||||
Sbjct 558796 TTTGGTGCTAAATACAAGACATGCGATG-AC---GACTACACTGGCCAAGGATTTGATCA 558851
Query 40961 ATTACAGTGCGTTATAGAT----ACGATTAAATCCGATCCCGATAGCCGACGTATAATAT 41016
||| | || | | ||| | | | || | |||| | | || | || ||
Sbjct 558852 ATT---GGCCGATTT-GATCTCAAAGCTAAAGAACAATCCATACGACAGAAGAATCATCA 558907
Query 41017 TGTGCGCGTGGAACCCAACGGACGTACATTTGATGGCATTGCCACCTTGTCATTTGTTAT 41076
|| | || ||||| ||| | || | | | |||||| ||||| || |||||| | || |
Sbjct 558908 TGAGTGCATGGAATCCACCAGATTTCCCATCGATGGCTTTGCCGCCATGTCATGTCTTTT 558967
Query 41077 GTCAGTTTTACGT-----TTGC----AATGGTGA------ACTGTCATGTCAATTGTATC 41121
|||||| || || || | ||||| | ||| || |||| | ||||||
Sbjct 558968 CTCAGTTCTATGTCAGTTTTCCTGAGAATGGAAAGCCAAGACTTTCTTGTCTACTGTATC 559027
Query 41122 AAAGATCAGGTGACATGGGACTAGGGGTCCCGTTTAACATAGCGAGTTATGCTCTGCTCA 41181
||||||| |||| ||||||||||| || || || ||||| || ||||| || || |
Sbjct 559028 AAAGATCCTGTGATATGGGACTAGGAGTGCCCTTCAACATTGCATCGTATGCGCTTCTGA 559087
Query 41182 CGTATATGATTGCACACGTTACCAATTTAAAACCTGGTGAATTTGTTCACACGTTAGGAG 41241
| | ||| |||| || || | || | |||| ||||| ||| |||| || | || |
Sbjct 559088 CCAAGATGGTTGCCCATGTCTGCGATATGGAACCGGGTGAGTTTATTCATACCATGGGCG 559147
Query 41242 ATGGACATATTTACATTAATCACATAGA 41269
||| || |||||| ||||||| ||
Sbjct 559148 ATGCTCACGTTTACAAAGATCACATCGA 559175
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397455961248040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |