Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F001029055.1_202015-06-
17] 8 sequences; 11,524,969 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq8 192 7e-44
>seq8
Length=940994
Score = 192 bits (212), Expect = 7e-44
Identities = 552/845 (65%), Gaps = 18/845 (2%)
Strand=Plus/Plus
Query 110937 CTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAG 110996
|||| ||||| |||||| || |||| || ||||| || || ||||| ||||| |
Sbjct 324211 CTTC-GCCAACTCACAGGAGGCTTCCAAAGAAGCGTGGTAGATAGTTTCGAAGATTTGGA 324269
Query 110997 CATTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCG 111056
|| | ||||||||||| | || ||||||| || ||| ||||| || || |
Sbjct 324270 TGTTTAGATCCTTGGCTTCTTGAGACTCAAATGGAACACGCAACATCATAAACACGTCAG 324329
Query 111057 CGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCT 111116
| | ||| | ||||| | | | |||||||||| || ||||||||| |||| ||
Sbjct 324330 CCAAACCATTGACACCTAGAGCCATAGGTCTGTTTCTCATATTAGAGTTTCTAGCTTCAG 324389
Query 111117 CAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGA 111176
||| || || | |||| || ||||| ||| | || || | || ||| | |
Sbjct 324390 GAACTGGGTAGTAGTTTCGATCGATGACCTTGTTCAAGTTACGAGTGATAACCTTGGCAA 324449
Query 111177 TTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCT------CTTCA-----TTGAC-AT 111224
||| ||| | || || ||||| | | |||| | ||| |||| |
Sbjct 324450 TTTTATGCAACTTGGCAAAATCATACCACTGGGTCTTACCATCATCAGCAACTTGAATAC 324509
Query 111225 ACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACT 111284
|| ||| | ||||| || ||||| || ||||| || |||||||| ||| |||||
Sbjct 324510 ACGATGGTAAAGCGATGGAGGCCAAGTTACAAACGGCAGTCTCATCAGGTGCTGAGTACT 324569
Query 111285 CTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCT 111344
| | ||||| ||| ||||| || ||||| || ||||| ||||||||||| ||||
Sbjct 324570 CAACGATTTCACAACACAAGTTAGAGGATTTAATAGTACCCAAGTTCTTTTGGTTGCTCT 324629
Query 111345 TCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGA 111404
| |||| || ||||| ||||| |||||| | || || || ||||| || || |||| |
Sbjct 324630 TTATGTTACAGGCATCTTTGTAAAGCATGAATGGGGTACCAGTCTCTGTTTGAGATTCCA 324689
Query 111405 GAATAGCCTTCCAAACATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGT 111464
||||| | ||| | | ||| | | | | | || || || || |||
Sbjct 324690 AGATAGCGTACCACAGTTTTTGAGCTTTGATAGTCTTTCTACCACGACCTTCAGCGACGT 324749
Query 111465 ACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGT 111524
| | || | ||||||||| || ||||| | || || | |||||| || |
Sbjct 324750 AACGTTCATATAAGGCTTCAAATTCATCACCATAAACATCAGACAAACCTGGAGCTTCAC 324809
Query 111525 CTGGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAA 111584
|||| |||| | || ||||| |||| || | ||| || |||||||| | |||||||
Sbjct 324810 TTGGAGAGAACAAAGTCCATTCACCATTCTCTTGAACACGTTTCATGAACAAATCTGGAA 324869
Query 111585 TCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTA 111644
|||| |||| || || | |||||| ||| |||||| | ||| ||||| || |
Sbjct 324870 TCCAGAGGGCTGGGAACAAATCTCTTGCACGAATCTCTTCCTTACCGTGGTTCTTCCGGA 324929
Query 111645 ACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATC--- 111701
|| | ||| || | ||| || ||||||||||| || | || | |||| || |
Sbjct 324930 TATCTATGAAATCAAAGATGTCTGCGTGCCATGGTTCCAAGTACAAAGCGAAAGCACCTG 324989
Query 111702 -CCTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATT 111760
||||| | ||| |||||| ||||| || || ||| ||| || || || | |||
Sbjct 324990 GCCTTTTG-TTACCACCTTGATCCACATAACGAGCAGTGTTGTTGAAGACACGTACCATG 325048
Query 111761 GGAAT 111765
|| ||
Sbjct 325049 GGGAT 325053
Score = 109 bits (120), Expect = 7e-19
Identities = 177/252 (70%), Gaps = 2/252 (1%)
Strand=Plus/Plus
Query 111824 TGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTT 111883
|| ||||| | |||||||| ||||| ||| || || ||||| ||| | | |||
Sbjct 325649 TGAATGTGTAAACCAATACCACCAGCGGTCTTAGAAATCATAGCACATTCCTTCAAAGTA 325708
Query 111884 CCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGC 111943
| || ||||| | ||| ||||| ||||| ||||||| ||||| || ||||||||
Sbjct 325709 TCGTAAATACCCTCGATGGAGTCATCCTTCATGGCGATTAGGAAACATGAAGACATCTGA 325768
Query 111944 GGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-TGGGA 112002
|| | ||| |||||||||||||| || ||||| | || |||||||| || || |||
Sbjct 325769 GGGCGTGGAGTACCAGCATTGAAAAGAGTTGGAGAAGCATGAATGAA-GTATCTCAAGGA 325827
Query 112003 CATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGAC 112062
|||| | || ||||| | |||| || ||||| || || || || || | || ||
Sbjct 325828 CATCAGATTATAAGTCTCAATAGCAGACTCGATGTCGTCACCATGAATACCAACAGCAAC 325887
Query 112063 CCGCATGAACAT 112074
| ||| | |||
Sbjct 325888 TCTCATAATCAT 325899
Score = 84.2 bits (92), Expect = 3e-11
Identities = 115/161 (71%), Gaps = 0/161 (0%)
Strand=Plus/Minus
Query 164614 TTGCACCACGATCCGGTCTCGCTGTGAAGCATGGTATTCAAGTTGGTGCGGGTGTTATTG 164673
|||| || |||| ||||| || || |||||||| |||||| || || || || | |
Sbjct 488943 TTGCCCCCAGATCTGGTCTAGCAGTCAAGCATGGGATTCAAACCGGCGCTGGAGTGGTCG 488884
Query 164674 ATCCCGACTATACAGGTGAAGTCAAAGTCGTTCTCTTCAATCACGGAGACAAAGACTTTG 164733
|| |||||||| ||||||||||||||||| || || || || |||| || || |
Sbjct 488883 ATAGGGACTATACGGGTGAAGTCAAAGTCGTGCTTTTTAACCATTCTAACAAGGATTTCG 488824
Query 164734 AGGTAAAGAAAGGGGATCGCATCGCACAACTTGTCCTTGAG 164774
|| | || ||||| ||| | | || ||| | |||| |||
Sbjct 488823 AGATTAACAAAGGTGATAGAGTAGCGCAATTGATCCTCGAG 488783
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628031937196800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |