Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F001029055.1_202015-06- 17] 8 sequences; 11,524,969 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq8 192 7e-44 >seq8 Length=940994 Score = 192 bits (212), Expect = 7e-44 Identities = 552/845 (65%), Gaps = 18/845 (2%) Strand=Plus/Plus Query 110937 CTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAG 110996 |||| ||||| |||||| || |||| || ||||| || || ||||| ||||| | Sbjct 324211 CTTC-GCCAACTCACAGGAGGCTTCCAAAGAAGCGTGGTAGATAGTTTCGAAGATTTGGA 324269 Query 110997 CATTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCG 111056 || | ||||||||||| | || ||||||| || ||| ||||| || || | Sbjct 324270 TGTTTAGATCCTTGGCTTCTTGAGACTCAAATGGAACACGCAACATCATAAACACGTCAG 324329 Query 111057 CGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCT 111116 | | ||| | ||||| | | | |||||||||| || ||||||||| |||| || Sbjct 324330 CCAAACCATTGACACCTAGAGCCATAGGTCTGTTTCTCATATTAGAGTTTCTAGCTTCAG 324389 Query 111117 CAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGA 111176 ||| || || | |||| || ||||| ||| | || || | || ||| | | Sbjct 324390 GAACTGGGTAGTAGTTTCGATCGATGACCTTGTTCAAGTTACGAGTGATAACCTTGGCAA 324449 Query 111177 TTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCT------CTTCA-----TTGAC-AT 111224 ||| ||| | || || ||||| | | |||| | ||| |||| | Sbjct 324450 TTTTATGCAACTTGGCAAAATCATACCACTGGGTCTTACCATCATCAGCAACTTGAATAC 324509 Query 111225 ACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACT 111284 || ||| | ||||| || ||||| || ||||| || |||||||| ||| ||||| Sbjct 324510 ACGATGGTAAAGCGATGGAGGCCAAGTTACAAACGGCAGTCTCATCAGGTGCTGAGTACT 324569 Query 111285 CTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCT 111344 | | ||||| ||| ||||| || ||||| || ||||| ||||||||||| |||| Sbjct 324570 CAACGATTTCACAACACAAGTTAGAGGATTTAATAGTACCCAAGTTCTTTTGGTTGCTCT 324629 Query 111345 TCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGA 111404 | |||| || ||||| ||||| |||||| | || || || ||||| || || |||| | Sbjct 324630 TTATGTTACAGGCATCTTTGTAAAGCATGAATGGGGTACCAGTCTCTGTTTGAGATTCCA 324689 Query 111405 GAATAGCCTTCCAAACATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGT 111464 ||||| | ||| | | ||| | | | | | || || || || ||| Sbjct 324690 AGATAGCGTACCACAGTTTTTGAGCTTTGATAGTCTTTCTACCACGACCTTCAGCGACGT 324749 Query 111465 ACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGT 111524 | | || | ||||||||| || ||||| | || || | |||||| || | Sbjct 324750 AACGTTCATATAAGGCTTCAAATTCATCACCATAAACATCAGACAAACCTGGAGCTTCAC 324809 Query 111525 CTGGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAA 111584 |||| |||| | || ||||| |||| || | ||| || |||||||| | ||||||| Sbjct 324810 TTGGAGAGAACAAAGTCCATTCACCATTCTCTTGAACACGTTTCATGAACAAATCTGGAA 324869 Query 111585 TCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTA 111644 |||| |||| || || | |||||| ||| |||||| | ||| ||||| || | Sbjct 324870 TCCAGAGGGCTGGGAACAAATCTCTTGCACGAATCTCTTCCTTACCGTGGTTCTTCCGGA 324929 Query 111645 ACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATC--- 111701 || | ||| || | ||| || ||||||||||| || | || | |||| || | Sbjct 324930 TATCTATGAAATCAAAGATGTCTGCGTGCCATGGTTCCAAGTACAAAGCGAAAGCACCTG 324989 Query 111702 -CCTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATT 111760 ||||| | ||| |||||| ||||| || || ||| ||| || || || | ||| Sbjct 324990 GCCTTTTG-TTACCACCTTGATCCACATAACGAGCAGTGTTGTTGAAGACACGTACCATG 325048 Query 111761 GGAAT 111765 || || Sbjct 325049 GGGAT 325053 Score = 109 bits (120), Expect = 7e-19 Identities = 177/252 (70%), Gaps = 2/252 (1%) Strand=Plus/Plus Query 111824 TGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTT 111883 || ||||| | |||||||| ||||| ||| || || ||||| ||| | | ||| Sbjct 325649 TGAATGTGTAAACCAATACCACCAGCGGTCTTAGAAATCATAGCACATTCCTTCAAAGTA 325708 Query 111884 CCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGC 111943 | || ||||| | ||| ||||| ||||| ||||||| ||||| || |||||||| Sbjct 325709 TCGTAAATACCCTCGATGGAGTCATCCTTCATGGCGATTAGGAAACATGAAGACATCTGA 325768 Query 111944 GGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-TGGGA 112002 || | ||| |||||||||||||| || ||||| | || |||||||| || || ||| Sbjct 325769 GGGCGTGGAGTACCAGCATTGAAAAGAGTTGGAGAAGCATGAATGAA-GTATCTCAAGGA 325827 Query 112003 CATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGAC 112062 |||| | || ||||| | |||| || ||||| || || || || || | || || Sbjct 325828 CATCAGATTATAAGTCTCAATAGCAGACTCGATGTCGTCACCATGAATACCAACAGCAAC 325887 Query 112063 CCGCATGAACAT 112074 | ||| | ||| Sbjct 325888 TCTCATAATCAT 325899 Score = 84.2 bits (92), Expect = 3e-11 Identities = 115/161 (71%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 164614 TTGCACCACGATCCGGTCTCGCTGTGAAGCATGGTATTCAAGTTGGTGCGGGTGTTATTG 164673 |||| || |||| ||||| || || |||||||| |||||| || || || || | | Sbjct 488943 TTGCCCCCAGATCTGGTCTAGCAGTCAAGCATGGGATTCAAACCGGCGCTGGAGTGGTCG 488884 Query 164674 ATCCCGACTATACAGGTGAAGTCAAAGTCGTTCTCTTCAATCACGGAGACAAAGACTTTG 164733 || |||||||| ||||||||||||||||| || || || || |||| || || | Sbjct 488883 ATAGGGACTATACGGGTGAAGTCAAAGTCGTGCTTTTTAACCATTCTAACAAGGATTTCG 488824 Query 164734 AGGTAAAGAAAGGGGATCGCATCGCACAACTTGTCCTTGAG 164774 || | || ||||| ||| | | || ||| | |||| ||| Sbjct 488823 AGATTAACAAAGGTGATAGAGTAGCGCAATTGATCCTCGAG 488783 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628031937196800