Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F001029055.1_202015-06- 17] 8 sequences; 11,524,969 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq8 159 4e-34 seq1 87.8 2e-12 >seq8 Length=940994 Score = 159 bits (176), Expect = 4e-34 Identities = 587/914 (64%), Gaps = 19/914 (2%) Strand=Plus/Plus Query 118343 CCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGG 118402 ||||| ||| |||| | |||||||| || ||| || || ||| | || || || Sbjct 324142 CCACAGATCGTACTGCAAAATACCTTGAGAGATTGGAGAACCTTCATAAGTGGAGTAAGG 324201 Query 118403 GCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAA 118462 || || || |||||| || || || || | | ||||| || || ||||| || Sbjct 324202 TCCATCCTTCTTCGCCAACTCACAGGAGGCTTCCAAAGAAGCGTGGTAGATAGTTTCGAA 324261 Query 118463 AATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAA 118522 || | || | ||||||| || | || ||||| | | || ||| ||||| Sbjct 324262 GATTTGGATGTTTAGATCCTTGGCTTCTTGAGACTCAAATGGAACACGCAACATCATAAA 324321 Query 118523 TACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCG 118582 || || || | ||| | |||||| || | || || | | |||||||||||| || | Sbjct 324322 CACGTCAGCCAAACCATTGACACCTAGAGCCATAGGTCTGTTTCTCATATTAGAGTTTCT 324381 Query 118583 AGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAAC 118642 ||| || || || | || | |||||| ||| | || | || |||| ||| Sbjct 324382 AGCTTCAGGAACTGGGTAGTAGTTTCGATCGATGACCTTGTTCAAGTTACGAGTGATAAC 324441 Query 118643 CTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCT---CTTCATTGACATA 118699 ||| | |||| ||| | ||| | ||||| | | | |||| | |||| || | Sbjct 324442 CTTGGCAATTTTATGCAACTTGGCAAAATCATACCACTGGGTCTTACCATCATCAGCA-A 324500 Query 118700 CTT------AGGAAGG----GCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTAT 118749 ||| | || || ||||| || |||| ||||| || | |||||||| Sbjct 324501 CTTGAATACACGATGGTAAAGCGATGGAGGCCAAGTTACAAACGGCAGTCTCATCAGGTG 324560 Query 118750 CAGTGTACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTT 118809 | | |||||| | ||||| |||||||| || ||||| || ||||||||||||| Sbjct 324561 CTGAGTACTCAACGATTTCACAACACAAGTTAGAGGATTTAATAGTACCCAAGTTCTTTT 324620 Query 118810 GATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTT 118869 | || |||| ||||||| ||||| |||||||||||| |||| || || ||||| |||| Sbjct 324621 GGTTGCTCTTTATGTTACAGGCATCTTTGTAAAGCATGAATGGGGTACCAGTCTCTGTTT 324680 Query 118870 GGGACTTGAGAATAGCCTTCCAGACATCGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCT 118929 | || | | ||||| | ||| | | |||| | ||| | | || || | Sbjct 324681 GAGATTCCAAGATAGCGTACCACAGTTTTTGAGCTTTGATAGTCTTTCTACCACGACCTT 324740 Query 118930 CTTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTG 118989 | | |||| | || | ||||||||| || ||||| | || || | |||| Sbjct 324741 CAGCGACGTAACGTTCATATAAGGCTTCAAATTCATCACCATAAACATCAGACAAACCTG 324800 Query 118990 GTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGA 119049 | || | | ||| |||| | || ||||| |||| ||| | ||| || |||||||| | Sbjct 324801 GAGCTTCACTTGGAGAGAACAAAGTCCATTCACCATTCTCTTGAACACGTTTCATGAACA 324860 Query 119050 GGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGAT 119109 ||||| |||||||| || | ||| | ||| | ||| ||||| | || || | Sbjct 324861 AATCTGGAATCCAGAGGGCTGGGAACAAATCTCTTGCACGAATCTCTTCCTTACCGTGGT 324920 Query 119110 TGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGA 119169 | || | || | || || | ||| || |||||||| ||||||| ||||| |||| Sbjct 324921 TCTTCCGGATATCTATGAAATCAAAGATGTCTGCGTGCCATGGTTCCAAGTACAAAGCGA 324980 Query 119170 TTG-ACC---CCTTACGACGACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACA 119225 | ||| |||| | |||| | || | ||||| | |||||| ||| || ||| Sbjct 324981 AAGCACCTGGCCTTTTG-TTACCACCTTGATCCACATAACGAGCAGTGTTGTTGAAGACA 325039 Query 119226 CGAAGCATTGGAAT 119239 || | ||| || || Sbjct 325040 CGTACCATGGGGAT 325053 Score = 86.0 bits (94), Expect = 8e-12 Identities = 122/172 (71%), Gaps = 0/172 (0%) Strand=Plus/Minus Query 167949 TACGGTCGCGTGGCGCCAAGATCTGGACTCGCTGTGAAGAGTGGTATCCAAGTTGGTGCG 168008 |||||| | | || || |||||||| || || || ||| ||| || ||| || || Sbjct 488953 TACGGTAGAATTGCCCCCAGATCTGGTCTAGCAGTCAAGCATGGGATTCAAACCGGCGCT 488894 Query 168009 GGTGTTGTTGATCCAGACTATACGGGTGAAGTCAAAGTCGTTCTCTTCAATCACGGGCAC 168068 || || || ||| |||||||||||||||||||||||||| || || || || || Sbjct 488893 GGAGTGGTCGATAGGGACTATACGGGTGAAGTCAAAGTCGTGCTTTTTAACCATTCTAAC 488834 Query 168069 ACAGATTTCCAAATCAAAAAGGGGGATCGCATCGCGCAACTCATCTTAGAGA 168120 | |||||| | || || || || ||| | | |||||| | ||| | |||| Sbjct 488833 AAGGATTTCGAGATTAACAAAGGTGATAGAGTAGCGCAATTGATCCTCGAGA 488782 >seq1 Length=1865156 Score = 87.8 bits (96), Expect = 2e-12 Identities = 212/318 (67%), Gaps = 5/318 (2%) Strand=Plus/Minus Query 14153 AAGCCATCCATCTCAGTCAAGAGTTGATTGATGGTTTGTTCGCGTTCATCATTCGCA--- 14209 || |||||||||||| ||| ||||| || | || | ||| | |||||| || || Sbjct 583898 AAACCATCCATCTCAACCAAAAGTTGGTTCAAAGTATTTTCTCTTTCATCGTTAGCTCCT 583839 Query 14210 GGCATACCACCCGCACTGCGTTGCTT-ACCGACGGCGTCAATTTCATCGATGAAAACGAT 14268 | || ||| ||| |||||| ||| | || ||||||||||||||||| || || Sbjct 583838 GAAATGTTGCCCTT-CTGTCTTGCTTTACCAATAGCATCAATTTCATCGATGAAGACCAT 583780 Query 14269 ACATGGTTGATTTTCACGGGCAACTTCAAAGATATCTCGCACTCTCTTGGCACCGACACC 14328 | |||| || || | || | || | || ||||||||| ||||||||||| Sbjct 583779 AGATGGAGCGTTCTCCCTAGCGGTCTTGAACAAGTCACGCACTCTCGAAGCACCGACACC 583720 Query 14329 CACAAACATCTCCACAAAATTGGCGGCGGAACATTGGATGAAGGGGACGTTAGATTCACC 14388 |||||||| || ||||| | || | ||| || ||| ||||| || |||||| Sbjct 583719 GACAAACATTTCAACAAACTCGGAACCCGAAACAAAGAAGAATGGGACTCCAGCTTCACC 583660 Query 14389 CGCGATGGCTCGGGCGAGGAGGGTCTTCCCCGTCCCTGGTTTCCCTGCGAGAAGGGCACC 14448 || |||| || | || ||||| || || ||||| || | ||||| ||||| Sbjct 583659 AGCAGTGGCCTTAGCCAATAGAGTCTTACCAGTACCTGGAGGACCAGAGAGAATAGCACC 583600 Query 14449 ACGTGGGATCCTGGCACC 14466 | ||| ||| | || || Sbjct 583599 TCTTGGAATCTTAGCTCC 583582 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618435138156480