Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F001029055.1_202015-06-
17] 8 sequences; 11,524,969 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq8 170 2e-37
seq1 129 7e-25
>seq8
Length=940994
Score = 170 bits (188), Expect = 2e-37
Identities = 575/892 (64%), Gaps = 19/892 (2%)
Strand=Plus/Minus
Query 104540 ATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAAGCTGGGCGTCGA 104599
|| || ||| | || || || ||| ||| || || ||||| |||||| ||| | |
Sbjct 325053 ATCCCCATGGTACGTGTCTTCAACAACACTGCTCGTTATGTGGATCAAGGTGGTAA-CAA 324995
Query 104600 AAGG----GATCTATCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCT 104655
|||| | || |||| | || | || ||||||||||| || ||| | || ||| |
Sbjct 324994 AAGGCCAGGTGCTTTCGCTTTGTACTTGGAACCATGGCACGCAGACATCTTTGATTTCAT 324935
Query 104656 TGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTGCC-GCGATCTCTTCTCCGCTC 104714
|| | || ||||| ||| | || ||| || ||| | ||| | ||| | || |
Sbjct 324934 AGATATCCGGAAGAACCACGGTAAGGAAGAGATTCG-TGCAAGAGATTTGTTCCCAGCCC 324876
Query 104715 TCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTT 104774
|||||||||||||| | |||||||| | ||| | |||| ||| | ||| || | || |
Sbjct 324875 TCTGGATTCCAGATTTGTTCATGAAACGTGTTCAAGAGAATGGTGAATGGACTTTGTTCT 324816
Query 104775 GTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTTTACA 104834
|||| | || || ||| | || |||| ||||| || ||||||||| | ||
Sbjct 324815 CTCCAAGTGAAGCTCCAGGTTTGTCTGATGTTTATGGTGATGAATTTGAAGCCTTATATG 324756
Query 104835 CAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGGTGCCAGCTGCCGATGTGTGGAAAG 104894
| |||| | |||||||| | | ||| | |||| | ||||| | |
Sbjct 324755 AACGTTACGTCGCTGAAGGTCGTGGTAGAAAGACTATCAAAGCTCAAAAACTGTGGTACG 324696
Query 104895 CTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACATGCTTTACAAAGACGCCTGTA 104954
|||| | | |||||||| ||||||||||| |||| ||||||||||||||| |||||||
Sbjct 324695 CTATCTTGGAATCTCAAACAGAGACTGGTACCCCATTCATGCTTTACAAAGATGCCTGTA 324636
Query 104955 ACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAATCTCTGTACAGAAA 105014
|| |||||| || |||||||| |||||| || || || || | ||| ||||
Sbjct 324635 ACATAAAGAGCAACCAAAAGAACTTGGGTACTATTAAATCCTCTAACTTGTGTTGTGAAA 324576
Query 105015 TCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCC 105074
|| | || | ||| |||||||| || || |||||| | || || |||||| | |
Sbjct 324575 TCGTTGAGTACTCAGCACCTGATGAGACTGCCGTTTGTAACTTGGCCTCCATCGCTTTAC 324516
Query 105075 C----------CAAGT--ATGTGGATCCAGAGACAAAGACATTTGATTATGAAAAACTCC 105122
| ||||| || ||| |||| || | ||||| || || | |
Sbjct 324515 CATCGTGTATTCAAGTTGCTGATGATGGTAAGACCCAGTGGTATGATTTTGCCAAGTTGC 324456
Query 105123 ACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACC 105182
| || || | || | |||| ||| | |||| || || ||| |||| | ||||
Sbjct 324455 ATAAAATTGCCAAGGTTATCACTCGTAACTTGAACAAGGTCATCGATCGAAACTACTACC 324396
Query 105183 CCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTTCAGG 105242
| ||| ||| | || |||||||||||| || | || || | ||| ||||| | |
Sbjct 324395 CAGTTCCTGAAGCTAGAAACTCTAATATGAGAAACAGACCTATGGCTCTAGGTGTCAATG 324336
Query 105243 GTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAA 105302
|| | || || || || || | | || ||||||| || | ||||| |||||
Sbjct 324335 GTTTGGCTGACGTGTTTATGATGTTGCGTGTTCCATTTGAGTCTCAAGAAGCCAAGGATC 324276
Query 105303 TCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGAGGCGAGTTCAGAGTTGG 105362
| || | || || || || || || ||||| || | || || | |||||||
Sbjct 324275 TAAACATCCAAATCTTCGAAACTATCTACCACGCTTCTTTGGAAGCCTCCTGTGAGTTGG 324216
Query 105363 CAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGG 105414
| || ||||| || || || | ||| ||||||||| || |||||
Sbjct 324215 CGAAGAAGGATGGACCTTACTCCACTTATGAAGGTTCTCCAATCTCTCAAGG 324164
Score = 118 bits (130), Expect = 1e-21
Identities = 179/252 (71%), Gaps = 2/252 (1%)
Strand=Plus/Minus
Query 104231 ATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTCTTGGAGACA 104290
||| | ||| | || || | ||||||||||| || ||||| || |||| | |||||
Sbjct 325899 ATGATTATGAGAGTTGCTGTTGGTATTCATGGTGACGACATCGAGTCTGCTATTGAGACT 325840
Query 104291 TACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTTCAATGCTGG 104349
|| | ||||||| || || |||||||| || | ||||| || |||||||||||
Sbjct 325839 TATAATCTGATGTCCTTGAGATAC-TTCATTCATGCTTCTCCAACTCTTTTCAATGCTGG 325781
Query 104350 TACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATCAA 104409
||| ||| | || || ||||| || ||||| ||||||| ||||| ||||| ||| |
Sbjct 325780 TACTCCACGCCCTCAGATGTCTTCATGTTTCCTAATCGCCATGAAGGATGACTCCATCGA 325721
Query 104410 CGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTGG 104469
||||| || | ||| | | ||| ||||| || || ||| ||||| ||||||||
Sbjct 325720 GGGTATTTACGATACTTTGAAGGAATGTGCTATGATTTCTAAGACCGCTGGTGGTATTGG 325661
Query 104470 GATGCACATCCA 104481
| ||||| ||
Sbjct 325660 TTTACACATTCA 325649
>seq1
Length=1865156
Score = 129 bits (142), Expect = 7e-25
Identities = 280/408 (69%), Gaps = 17/408 (4%)
Strand=Plus/Minus
Query 9614 AAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCT--- 9670
|||||||||||||| |||||||||||| | ||| | ||| | |||||| || |||
Sbjct 583898 AAACCATCCATCTCAACCAAAAGTTGGTTCAAAGTATTTTCTCTTTCATCGTTAGCTCCT 583839
Query 9671 GGCATACCACCAGCACTGCGTTGCTTTCCCACG-GCATCAATCTCATCAATGAAGACGAT 9729
| || || ||| ||||||| ||| |||||||| ||||| |||||||| ||
Sbjct 583838 GAAATGTTGCCCTT-CTGTCTTGCTTTACCAATAGCATCAATTTCATCGATGAAGACCAT 583780
Query 9730 GCATGGTTGATTTTCGCGAGCGA-CTTCAAAGAGATCCCGTACACGCTTGGCGCCCACAC 9788
|||| || || | |||| ||| || || || || || | | || || ||||
Sbjct 583779 AGATGGAGCGTTCTCCCTAGCGGTCTTGAACAAG-TCACGCACTCTCGAAGCACCGACAC 583721
Query 9789 CAACAAACATCTCCACAAAGTTTGCGG----CGGAACATTGGATGAAGGGGACATTAGAT 9844
| |||||||| || ||||| | ||| || |||| | | ||| ||||| || |
Sbjct 583720 CGACAAACATTTCAACAAACT---CGGAACCCGAAACAAAGAA-GAATGGGACTCCAGCT 583665
Query 9845 TCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGG 9904
||||| ||| |||| || | ||||||||||| |||||||| ||| | ||| |
Sbjct 583664 TCACCAGCAGTGGCCTTAGCCAATAGAGTCTTACCAGTACCTGGAGGACCAGAGAGAATA 583605
Query 9905 GCACCTCGTGGAATCTTGGCGCCACTTCCAAAGTATCTCTCAGGTTGCTT-AAGAAAATC 9963
||||||| ||||||||| || || || |||||||| ||||| || |||||| |
Sbjct 583604 GCACCTCTTGGAATCTTAGCTCCCATTTTTTCGTATCTCTTAGGTTCTTTCAAGAAACT- 583546
Query 9964 CACAATTTCTTCCAATTCATCTTTGGCGGCGTCAATCCCCTCAACATC 10011
|| | ||| | ||| |||||||| ||||| || |||||||
Sbjct 583545 GACGAATTCCATAATTTCCTCTTTGGCTTCGTCACAACCGGCAACATC 583498
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583260741673920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |