Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F001029055.1_202015-06- 17] 8 sequences; 11,524,969 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq8 170 2e-37 seq1 129 7e-25 >seq8 Length=940994 Score = 170 bits (188), Expect = 2e-37 Identities = 575/892 (64%), Gaps = 19/892 (2%) Strand=Plus/Minus Query 104540 ATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAAGCTGGGCGTCGA 104599 || || ||| | || || || ||| ||| || || ||||| |||||| ||| | | Sbjct 325053 ATCCCCATGGTACGTGTCTTCAACAACACTGCTCGTTATGTGGATCAAGGTGGTAA-CAA 324995 Query 104600 AAGG----GATCTATCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCT 104655 |||| | || |||| | || | || ||||||||||| || ||| | || ||| | Sbjct 324994 AAGGCCAGGTGCTTTCGCTTTGTACTTGGAACCATGGCACGCAGACATCTTTGATTTCAT 324935 Query 104656 TGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTGCC-GCGATCTCTTCTCCGCTC 104714 || | || ||||| ||| | || ||| || ||| | ||| | ||| | || | Sbjct 324934 AGATATCCGGAAGAACCACGGTAAGGAAGAGATTCG-TGCAAGAGATTTGTTCCCAGCCC 324876 Query 104715 TCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTT 104774 |||||||||||||| | |||||||| | ||| | |||| ||| | ||| || | || | Sbjct 324875 TCTGGATTCCAGATTTGTTCATGAAACGTGTTCAAGAGAATGGTGAATGGACTTTGTTCT 324816 Query 104775 GTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTTTACA 104834 |||| | || || ||| | || |||| ||||| || ||||||||| | || Sbjct 324815 CTCCAAGTGAAGCTCCAGGTTTGTCTGATGTTTATGGTGATGAATTTGAAGCCTTATATG 324756 Query 104835 CAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGGTGCCAGCTGCCGATGTGTGGAAAG 104894 | |||| | |||||||| | | ||| | |||| | ||||| | | Sbjct 324755 AACGTTACGTCGCTGAAGGTCGTGGTAGAAAGACTATCAAAGCTCAAAAACTGTGGTACG 324696 Query 104895 CTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACATGCTTTACAAAGACGCCTGTA 104954 |||| | | |||||||| ||||||||||| |||| ||||||||||||||| ||||||| Sbjct 324695 CTATCTTGGAATCTCAAACAGAGACTGGTACCCCATTCATGCTTTACAAAGATGCCTGTA 324636 Query 104955 ACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAATCTCTGTACAGAAA 105014 || |||||| || |||||||| |||||| || || || || | ||| |||| Sbjct 324635 ACATAAAGAGCAACCAAAAGAACTTGGGTACTATTAAATCCTCTAACTTGTGTTGTGAAA 324576 Query 105015 TCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCC 105074 || | || | ||| |||||||| || || |||||| | || || |||||| | | Sbjct 324575 TCGTTGAGTACTCAGCACCTGATGAGACTGCCGTTTGTAACTTGGCCTCCATCGCTTTAC 324516 Query 105075 C----------CAAGT--ATGTGGATCCAGAGACAAAGACATTTGATTATGAAAAACTCC 105122 | ||||| || ||| |||| || | ||||| || || | | Sbjct 324515 CATCGTGTATTCAAGTTGCTGATGATGGTAAGACCCAGTGGTATGATTTTGCCAAGTTGC 324456 Query 105123 ACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACC 105182 | || || | || | |||| ||| | |||| || || ||| |||| | |||| Sbjct 324455 ATAAAATTGCCAAGGTTATCACTCGTAACTTGAACAAGGTCATCGATCGAAACTACTACC 324396 Query 105183 CCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTTCAGG 105242 | ||| ||| | || |||||||||||| || | || || | ||| ||||| | | Sbjct 324395 CAGTTCCTGAAGCTAGAAACTCTAATATGAGAAACAGACCTATGGCTCTAGGTGTCAATG 324336 Query 105243 GTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAA 105302 || | || || || || || | | || ||||||| || | ||||| ||||| Sbjct 324335 GTTTGGCTGACGTGTTTATGATGTTGCGTGTTCCATTTGAGTCTCAAGAAGCCAAGGATC 324276 Query 105303 TCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGAGGCGAGTTCAGAGTTGG 105362 | || | || || || || || || ||||| || | || || | ||||||| Sbjct 324275 TAAACATCCAAATCTTCGAAACTATCTACCACGCTTCTTTGGAAGCCTCCTGTGAGTTGG 324216 Query 105363 CAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGG 105414 | || ||||| || || || | ||| ||||||||| || ||||| Sbjct 324215 CGAAGAAGGATGGACCTTACTCCACTTATGAAGGTTCTCCAATCTCTCAAGG 324164 Score = 118 bits (130), Expect = 1e-21 Identities = 179/252 (71%), Gaps = 2/252 (1%) Strand=Plus/Minus Query 104231 ATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTCTTGGAGACA 104290 ||| | ||| | || || | ||||||||||| || ||||| || |||| | ||||| Sbjct 325899 ATGATTATGAGAGTTGCTGTTGGTATTCATGGTGACGACATCGAGTCTGCTATTGAGACT 325840 Query 104291 TACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTTCAATGCTGG 104349 || | ||||||| || || |||||||| || | ||||| || ||||||||||| Sbjct 325839 TATAATCTGATGTCCTTGAGATAC-TTCATTCATGCTTCTCCAACTCTTTTCAATGCTGG 325781 Query 104350 TACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATCAA 104409 ||| ||| | || || ||||| || ||||| ||||||| ||||| ||||| ||| | Sbjct 325780 TACTCCACGCCCTCAGATGTCTTCATGTTTCCTAATCGCCATGAAGGATGACTCCATCGA 325721 Query 104410 CGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTGG 104469 ||||| || | ||| | | ||| ||||| || || ||| ||||| |||||||| Sbjct 325720 GGGTATTTACGATACTTTGAAGGAATGTGCTATGATTTCTAAGACCGCTGGTGGTATTGG 325661 Query 104470 GATGCACATCCA 104481 | ||||| || Sbjct 325660 TTTACACATTCA 325649 >seq1 Length=1865156 Score = 129 bits (142), Expect = 7e-25 Identities = 280/408 (69%), Gaps = 17/408 (4%) Strand=Plus/Minus Query 9614 AAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCT--- 9670 |||||||||||||| |||||||||||| | ||| | ||| | |||||| || ||| Sbjct 583898 AAACCATCCATCTCAACCAAAAGTTGGTTCAAAGTATTTTCTCTTTCATCGTTAGCTCCT 583839 Query 9671 GGCATACCACCAGCACTGCGTTGCTTTCCCACG-GCATCAATCTCATCAATGAAGACGAT 9729 | || || ||| ||||||| ||| |||||||| ||||| |||||||| || Sbjct 583838 GAAATGTTGCCCTT-CTGTCTTGCTTTACCAATAGCATCAATTTCATCGATGAAGACCAT 583780 Query 9730 GCATGGTTGATTTTCGCGAGCGA-CTTCAAAGAGATCCCGTACACGCTTGGCGCCCACAC 9788 |||| || || | |||| ||| || || || || || | | || || |||| Sbjct 583779 AGATGGAGCGTTCTCCCTAGCGGTCTTGAACAAG-TCACGCACTCTCGAAGCACCGACAC 583721 Query 9789 CAACAAACATCTCCACAAAGTTTGCGG----CGGAACATTGGATGAAGGGGACATTAGAT 9844 | |||||||| || ||||| | ||| || |||| | | ||| ||||| || | Sbjct 583720 CGACAAACATTTCAACAAACT---CGGAACCCGAAACAAAGAA-GAATGGGACTCCAGCT 583665 Query 9845 TCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGG 9904 ||||| ||| |||| || | ||||||||||| |||||||| ||| | ||| | Sbjct 583664 TCACCAGCAGTGGCCTTAGCCAATAGAGTCTTACCAGTACCTGGAGGACCAGAGAGAATA 583605 Query 9905 GCACCTCGTGGAATCTTGGCGCCACTTCCAAAGTATCTCTCAGGTTGCTT-AAGAAAATC 9963 ||||||| ||||||||| || || || |||||||| ||||| || |||||| | Sbjct 583604 GCACCTCTTGGAATCTTAGCTCCCATTTTTTCGTATCTCTTAGGTTCTTTCAAGAAACT- 583546 Query 9964 CACAATTTCTTCCAATTCATCTTTGGCGGCGTCAATCCCCTCAACATC 10011 || | ||| | ||| |||||||| ||||| || ||||||| Sbjct 583545 GACGAATTCCATAATTTCCTCTTTGGCTTCGTCACAACCGGCAACATC 583498 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583260741673920