Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F001029055.1_202015-06- 17] 8 sequences; 11,524,969 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq8 89.7 6e-13 >seq8 Length=940994 Score = 89.7 bits (98), Expect = 6e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 78188 GTGTTCGCAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATAC 78247 |||||| || |||||||| || ||||| | |||||||||||| ||||| | ||||||| Sbjct 323462 GTGTTCTCAGGTAGTACATACCAGTCTTCAAACCCTTCTTCCAACCGTAGAAATGCATAC 323521 Query 78248 TCGACAGCTTGGCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTGGTCGA 78307 | | || || ||| | | || ||| ||||| | || |||||||| |||| Sbjct 323522 TAGTCAATTTACCCATAGTTGGAGCACGGATGTGAATGTTCAATGATTGGGACTGATCGA 323581 Query 78308 TGTACGCACCGCGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCAGATGG 78367 |||| || | || || || ||||| ||||||| | ||||| | || ||||| | | Sbjct 323582 TGTAAACAGCACGATCAGCTGCCATCTCGATGATAGTTTTTTGAGAGATTTCCCAAACAG 323641 Query 78368 TCCGGTAAATGGCCTTCAGCTCTT 78391 || ||| | |||| || |||| Sbjct 323642 TCTTGTACAAATCCTTTAGTTCTT 323665 Score = 87.8 bits (96), Expect = 2e-12 Identities = 144/207 (70%), Gaps = 8/207 (4%) Strand=Plus/Minus Query 19118 ATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTCCGC----GAGACATA 19173 ||| |||| || || || || ||||| |||||| || ||||| || ||||| || Sbjct 325893 ATGAGAGTTGCTGTTGGTATTCATGGTGACGACATC----GAGTCTGCTATTGAGACTTA 325838 Query 19174 CGACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTCAACGCCGGTAC 19233 | |||||| | || | ||||| || || | || || |||||||| || ||||| Sbjct 325837 TAATCTGATGTCCTTGAGATACTTCATTCATGCTTCTCCAACTCTTTTCAATGCTGGTAC 325778 Query 19234 GAACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGACAGCATTGAGGG 19293 ||| |||||||| ||||||||| | || |||||||||||| ||| ||||| Sbjct 325777 TCCACGCCCTCAGATGTCTTCATGTTTCCTAATCGCCATGAAGGATGACTCCATCGAGGG 325718 Query 19294 CATCTACGAGACGCTCAAGGAGTGCGC 19320 || ||||| || | ||||| || || Sbjct 325717 TATTTACGATACTTTGAAGGAATGTGC 325691 Score = 84.2 bits (92), Expect = 2e-11 Identities = 110/150 (73%), Gaps = 2/150 (1%) Strand=Plus/Plus Query 79057 GATGCCAGGTTGCACACGGCCGTCTCGTCCGG-GCTAGAAACCTCGATGATTTCTGTGCA 79115 || |||| ||| || ||||| ||||| || || ||| || ||| | |||||| || Sbjct 324527 GAGGCCAAGTTACAAACGGCAGTCTCATCAGGTGCT-GAGTACTCAACGATTTCACAACA 324585 Query 79116 CAAATTAGACGACTTGATGGTGCCGATGTTCTTCTGGTTGCTCTTCTCGTTACAGGCGTC 79175 ||| ||||| || || || || || | |||||| ||||||||||| ||||||||| || Sbjct 324586 CAAGTTAGAGGATTTAATAGTACCCAAGTTCTTTTGGTTGCTCTTTATGTTACAGGCATC 324645 Query 79176 CTTGTAGCACATGTACGGCGTCCCGGTCTC 79205 ||||| |||| | || || || ||||| Sbjct 324646 TTTGTAAAGCATGAATGGGGTACCAGTCTC 324675 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548524745147520