Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F001029055.1_202015-06-
17] 8 sequences; 11,524,969 total letters
Query= NC_028108.1
Length=171454
Score E
Sequences producing significant alignments: (Bits) Value
seq8 89.7 6e-13
>seq8
Length=940994
Score = 89.7 bits (98), Expect = 6e-13
Identities = 142/204 (70%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 78188 GTGTTCGCAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATAC 78247
|||||| || |||||||| || ||||| | |||||||||||| ||||| | |||||||
Sbjct 323462 GTGTTCTCAGGTAGTACATACCAGTCTTCAAACCCTTCTTCCAACCGTAGAAATGCATAC 323521
Query 78248 TCGACAGCTTGGCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTGGTCGA 78307
| | || || ||| | | || ||| ||||| | || |||||||| ||||
Sbjct 323522 TAGTCAATTTACCCATAGTTGGAGCACGGATGTGAATGTTCAATGATTGGGACTGATCGA 323581
Query 78308 TGTACGCACCGCGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCAGATGG 78367
|||| || | || || || ||||| ||||||| | ||||| | || ||||| | |
Sbjct 323582 TGTAAACAGCACGATCAGCTGCCATCTCGATGATAGTTTTTTGAGAGATTTCCCAAACAG 323641
Query 78368 TCCGGTAAATGGCCTTCAGCTCTT 78391
|| ||| | |||| || ||||
Sbjct 323642 TCTTGTACAAATCCTTTAGTTCTT 323665
Score = 87.8 bits (96), Expect = 2e-12
Identities = 144/207 (70%), Gaps = 8/207 (4%)
Strand=Plus/Minus
Query 19118 ATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTCCGC----GAGACATA 19173
||| |||| || || || || ||||| |||||| || ||||| || ||||| ||
Sbjct 325893 ATGAGAGTTGCTGTTGGTATTCATGGTGACGACATC----GAGTCTGCTATTGAGACTTA 325838
Query 19174 CGACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTCAACGCCGGTAC 19233
| |||||| | || | ||||| || || | || || |||||||| || |||||
Sbjct 325837 TAATCTGATGTCCTTGAGATACTTCATTCATGCTTCTCCAACTCTTTTCAATGCTGGTAC 325778
Query 19234 GAACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGACAGCATTGAGGG 19293
||| |||||||| ||||||||| | || |||||||||||| ||| |||||
Sbjct 325777 TCCACGCCCTCAGATGTCTTCATGTTTCCTAATCGCCATGAAGGATGACTCCATCGAGGG 325718
Query 19294 CATCTACGAGACGCTCAAGGAGTGCGC 19320
|| ||||| || | ||||| || ||
Sbjct 325717 TATTTACGATACTTTGAAGGAATGTGC 325691
Score = 84.2 bits (92), Expect = 2e-11
Identities = 110/150 (73%), Gaps = 2/150 (1%)
Strand=Plus/Plus
Query 79057 GATGCCAGGTTGCACACGGCCGTCTCGTCCGG-GCTAGAAACCTCGATGATTTCTGTGCA 79115
|| |||| ||| || ||||| ||||| || || ||| || ||| | |||||| ||
Sbjct 324527 GAGGCCAAGTTACAAACGGCAGTCTCATCAGGTGCT-GAGTACTCAACGATTTCACAACA 324585
Query 79116 CAAATTAGACGACTTGATGGTGCCGATGTTCTTCTGGTTGCTCTTCTCGTTACAGGCGTC 79175
||| ||||| || || || || || | |||||| ||||||||||| ||||||||| ||
Sbjct 324586 CAAGTTAGAGGATTTAATAGTACCCAAGTTCTTTTGGTTGCTCTTTATGTTACAGGCATC 324645
Query 79176 CTTGTAGCACATGTACGGCGTCCCGGTCTC 79205
||||| |||| | || || || |||||
Sbjct 324646 TTTGTAAAGCATGAATGGGGTACCAGTCTC 324675
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 548524745147520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |