Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F001029055.1_202015-06- 17] 8 sequences; 11,524,969 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq8 93.3 5e-14 seq5 86.0 7e-12 >seq8 Length=940994 Score = 93.3 bits (102), Expect = 5e-14 Identities = 160/229 (70%), Gaps = 5/229 (2%) Strand=Plus/Minus Query 55694 GGGTCCGTCCAGAATCT---GGAGATTCCTCTGCGTCTCAAGGAGATTTACCGGACGGTG 55750 || ||| |||| ||||| | | ||||||| || ||||| | ||| ||| || Sbjct 323696 GGCTCCATCCAAAATCTACCGAATATTCCTCAAGAACTAAAGGATTTGTACAAGACTGTT 323637 Query 55751 TGGGAGATTCCACAGAAGAGTCTGATTGACATGAGTGCTGATCGTGGTGCGTACATCGAC 55810 ||||| || | || || | | | || || ||| |||||||||| || |||||||| Sbjct 323636 TGGGAAATCTCTCAAAAAACTATCATCGAGATGGCAGCTGATCGTGCTGTTTACATCGAT 323577 Query 55811 CAGTCCCAGTCTCTGAACATCTTCATGGAGAATCCTTCACTGGCCAAGTTGAGCTCG-AT 55869 |||||||| || ||||||| ||| ||| | ||| || |||| || | || Sbjct 323576 CAGTCCCAATCATTGAACATTCACATCCGTGCTCCAACTATGGGTAAATTGA-CTAGTAT 323518 Query 55870 GCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGTATGTACTATCTG 55918 ||| || ||||| ||||||||||| | ||||| ||||||||||| ||| Sbjct 323517 GCATTTCTACGGTTGGAAGAAGGGTTTGAAGACTGGTATGTACTACCTG 323469 Score = 86.0 bits (94), Expect = 7e-12 Identities = 118/165 (72%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 53270 TACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGAATCACCCTCAGATGTCG 53329 ||||| | || || | ||||| || ||||| |||||||| | |||||||||||| Sbjct 325818 TACTTCATTCATGCTTCTCCAACTCTTTTCAATGCTGGTACTCCACGCCCTCAGATGTCT 325759 Query 53330 AGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCATCTACGAGACGCTCAAG 53389 || ||||| | || |||||||||||||| ||||| || || ||||| || | ||| Sbjct 325758 TCATGTTTCCTAATCGCCATGAAGGATGACTCCATCGAGGGTATTTACGATACTTTGAAG 325699 Query 53390 GAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCCAC 53434 || ||||| || || ||| | |||||||| ||| | ||| Sbjct 325698 GAATGTGCTATGATTTCTAAGACCGCTGGTGGTATTGGTTTACAC 325654 >seq5 Length=1457367 Score = 86.0 bits (94), Expect = 7e-12 Identities = 94/125 (75%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 74751 GCAAACTCCTGATGCGAGCCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCA 74810 ||||| || ||| | ||||||||||||| |||||||| || ||||||| || || Sbjct 1119101 GCAAAATCGGTATGTAAACCTTCATCTCTGCAGATCAATTCGTTAGAAAACGTTAGACCT 1119160 Query 74811 GGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATG 74870 ||||| || || |||||||||||| ||||| ||| |||||||| ||||| || Sbjct 1119161 GGCATTAGACCTTTCTTCTTCAACCAGAAGATAGCAGCAAAGGAACCTGAAAAGAAAATA 1119220 Query 74871 CCTTC 74875 ||||| Sbjct 1119221 CCTTC 1119225 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547215945278400