Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F001029055.1_202015-06-
17] 8 sequences; 11,524,969 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq5 210 2e-49
>seq5
Length=1457367
Score = 210 bits (232), Expect = 2e-49
Identities = 404/594 (68%), Gaps = 9/594 (2%)
Strand=Plus/Plus
Query 4547 ACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAA 4606
||| |||||||| ||| |||||||| ||||||| |||| |||||||||||||||||
Sbjct 1119097 ACATGCAAAATCGGTATGTAAACCTTCATCTCTGCAGATCAATTCGTTAGAAAACGTTAG 1119156
Query 4607 TCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAA 4666
|| ||||||| |||| |||| || | ||| || ||||| ||||| || || ||||||||
Sbjct 1119157 ACCTGGCATTAGACCTTTCTTCTTCAACCAGAAGATAGCAGCAAAGGAACCTGAAAAGAA 1119216
Query 4667 TATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTT---TGTC 4723
|| ||||| | ||| ||||| || || |||| ||| || | | || ||||
Sbjct 1119217 AATACCTTCAATGGCAGCAAAAGCAACCAATCTCTCTGCGA---AGATAGATTCACTGTC 1119273
Query 4724 TTTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGC 4783
| ||||||| | | ||||| | || || | |||| ||||| | | || ||
Sbjct 1119274 CTGAATCCATCTGATAGCCCATTCGGCCTTCTCTTTAATCTGAGGAATGTTTTCGATCGC 1119333
Query 4784 GTTAAATAATTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATA 4843
|| || || | |||| ||| || | |||||||| || |||| ||| |||
Sbjct 1119334 ATTGAACAAGAAATCGCTTTCCTTTGGATCCTTGATATAAGTATCAATTAACAGGGAATA 1119393
Query 4844 CATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGT 4903
| || || || || ||||| || || || || || ||||| ||| |||||||||
Sbjct 1119394 GGTCTCTGAGTGAATGTTTTCCATCATGATTTGGAAACCATAAAAACATTTAGCTTCTGG 1119453
Query 4904 TACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGC 4963
| ||| ||||| || || | || ||||| || || ||||||||||| ||| |||
Sbjct 1119454 AATTTGCACTTCTGCACTGAAATTCTCAACTAAATTCTCATTTACTATACCATCAGAGGC 1119513
Query 4964 TGCAAAAAACGCCAAAACATGAGATATAAAGTACTGTTCG---TCAGGCTTAAGTTTTTT 5020
||||| || ||||| ||| | || || || | |||| ||| | || | || ||
Sbjct 1119514 AGCAAAGAAGGCCAAGACACGGGAGATGAAAAATCTTTCGTTCTCATTCATACGGTTATT 1119573
Query 5021 CCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGC 5080
||| | | | ||| || | || ||||| ||||| | ||||| ||||| || || ||
Sbjct 1119574 CCAATCATGAATATCCTTCGATAGATCAATCTCTTCGGCCGTCCAGAACGAAGCCTCTGC 1119633
Query 5081 TTTTTTGTACATAGACCAAATATCAGGATACTGAATCGGAAGTATGACAAATCT 5134
| | || ||| |||||| ||| | || | || || | || ||||||||
Sbjct 1119634 TCTCTTATACGCTTGCCAAATCTCATGGTATTTGATTGGGAATAGAACAAATCT 1119687
Score = 125 bits (138), Expect = 6e-24
Identities = 247/361 (68%), Gaps = 6/361 (2%)
Strand=Plus/Plus
Query 4248 ACACCAAATTTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAAC 4307
|||||| || ||||| || || |||| ||||||||| ||||| || || || | | |
Sbjct 1118636 ACACCAGCCTTCTGGTAGTCAGAGACTCTCTTTTCGAAAAAATTGGTCTTACCAGCCAGC 1118695
Query 4308 GAAATATTTTCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTTTTCACACTTTAGA 4367
|| || || ||||| |||||||| || ||||| ||||| || |||| | |
Sbjct 1118696 GAGATGTTCTCCATGAAATCAAATGGGTTAGTCACGTTGAAAAACTTTTTGTTCCCGAAG 1118755
Query 4368 GCTACAAGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATT 4427
|| || || |||| ||||| || || || | |||||| |||| || ||| ||| ||
Sbjct 1118756 GCGACCAGTAATCTATCAGCGACGAACTCAACGTACTGGTTCATCAGGTCGGCGTTCATA 1118815
Query 4428 CCAATTAATCTCACAGGTAGCGCGTATGTCAAAAAC-TCTTGTTCTATAGTTACGGCTTC 4486
|| | ||| || ||||| || | | || || |||| ||| || ||||||||
Sbjct 1118816 CCCAATAAAGAAACGGGTAGAGCATCGATGAAGTACCTCTT-TTCGATCTCGACGGCTTC 1118874
Query 4487 TGTGATTATATCTTTTATTTTATCTTTAGAT--GGTTTATTTACTAAGTATCCAAACAAT 4544
|| || || ||||| | || ||| || ||||| || | |||| | |
Sbjct 1118875 AGTAATAAT--CTTTTCGATAATGGAAGGATCTGGCTTATTCTTCAAATGAGCAAATAGT 1118932
Query 4545 AAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTT 4604
| || |||||||| ||| |||||||||||||||| |||| ||||||||||||||||
Sbjct 1118933 AGGCATGCAAAATCGGTATGTAAACCTTCGTCTCTGCAGATCAATTCGTTAGAAAACGTT 1118992
Query 4605 A 4605
|
Sbjct 1118993 A 1118993
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427049558362664
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |