Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F001029055.1_202015-06- 17] 8 sequences; 11,524,969 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq5 210 2e-49 >seq5 Length=1457367 Score = 210 bits (232), Expect = 2e-49 Identities = 404/594 (68%), Gaps = 9/594 (2%) Strand=Plus/Plus Query 4547 ACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAA 4606 ||| |||||||| ||| |||||||| ||||||| |||| ||||||||||||||||| Sbjct 1119097 ACATGCAAAATCGGTATGTAAACCTTCATCTCTGCAGATCAATTCGTTAGAAAACGTTAG 1119156 Query 4607 TCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAA 4666 || ||||||| |||| |||| || | ||| || ||||| ||||| || || |||||||| Sbjct 1119157 ACCTGGCATTAGACCTTTCTTCTTCAACCAGAAGATAGCAGCAAAGGAACCTGAAAAGAA 1119216 Query 4667 TATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTT---TGTC 4723 || ||||| | ||| ||||| || || |||| ||| || | | || |||| Sbjct 1119217 AATACCTTCAATGGCAGCAAAAGCAACCAATCTCTCTGCGA---AGATAGATTCACTGTC 1119273 Query 4724 TTTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGC 4783 | ||||||| | | ||||| | || || | |||| ||||| | | || || Sbjct 1119274 CTGAATCCATCTGATAGCCCATTCGGCCTTCTCTTTAATCTGAGGAATGTTTTCGATCGC 1119333 Query 4784 GTTAAATAATTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATA 4843 || || || | |||| ||| || | |||||||| || |||| ||| ||| Sbjct 1119334 ATTGAACAAGAAATCGCTTTCCTTTGGATCCTTGATATAAGTATCAATTAACAGGGAATA 1119393 Query 4844 CATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGT 4903 | || || || || ||||| || || || || || ||||| ||| ||||||||| Sbjct 1119394 GGTCTCTGAGTGAATGTTTTCCATCATGATTTGGAAACCATAAAAACATTTAGCTTCTGG 1119453 Query 4904 TACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGC 4963 | ||| ||||| || || | || ||||| || || ||||||||||| ||| ||| Sbjct 1119454 AATTTGCACTTCTGCACTGAAATTCTCAACTAAATTCTCATTTACTATACCATCAGAGGC 1119513 Query 4964 TGCAAAAAACGCCAAAACATGAGATATAAAGTACTGTTCG---TCAGGCTTAAGTTTTTT 5020 ||||| || ||||| ||| | || || || | |||| ||| | || | || || Sbjct 1119514 AGCAAAGAAGGCCAAGACACGGGAGATGAAAAATCTTTCGTTCTCATTCATACGGTTATT 1119573 Query 5021 CCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGC 5080 ||| | | | ||| || | || ||||| ||||| | ||||| ||||| || || || Sbjct 1119574 CCAATCATGAATATCCTTCGATAGATCAATCTCTTCGGCCGTCCAGAACGAAGCCTCTGC 1119633 Query 5081 TTTTTTGTACATAGACCAAATATCAGGATACTGAATCGGAAGTATGACAAATCT 5134 | | || ||| |||||| ||| | || | || || | || |||||||| Sbjct 1119634 TCTCTTATACGCTTGCCAAATCTCATGGTATTTGATTGGGAATAGAACAAATCT 1119687 Score = 125 bits (138), Expect = 6e-24 Identities = 247/361 (68%), Gaps = 6/361 (2%) Strand=Plus/Plus Query 4248 ACACCAAATTTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAAC 4307 |||||| || ||||| || || |||| ||||||||| ||||| || || || | | | Sbjct 1118636 ACACCAGCCTTCTGGTAGTCAGAGACTCTCTTTTCGAAAAAATTGGTCTTACCAGCCAGC 1118695 Query 4308 GAAATATTTTCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTTTTCACACTTTAGA 4367 || || || ||||| |||||||| || ||||| ||||| || |||| | | Sbjct 1118696 GAGATGTTCTCCATGAAATCAAATGGGTTAGTCACGTTGAAAAACTTTTTGTTCCCGAAG 1118755 Query 4368 GCTACAAGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATT 4427 || || || |||| ||||| || || || | |||||| |||| || ||| ||| || Sbjct 1118756 GCGACCAGTAATCTATCAGCGACGAACTCAACGTACTGGTTCATCAGGTCGGCGTTCATA 1118815 Query 4428 CCAATTAATCTCACAGGTAGCGCGTATGTCAAAAAC-TCTTGTTCTATAGTTACGGCTTC 4486 || | ||| || ||||| || | | || || |||| ||| || |||||||| Sbjct 1118816 CCCAATAAAGAAACGGGTAGAGCATCGATGAAGTACCTCTT-TTCGATCTCGACGGCTTC 1118874 Query 4487 TGTGATTATATCTTTTATTTTATCTTTAGAT--GGTTTATTTACTAAGTATCCAAACAAT 4544 || || || ||||| | || ||| || ||||| || | |||| | | Sbjct 1118875 AGTAATAAT--CTTTTCGATAATGGAAGGATCTGGCTTATTCTTCAAATGAGCAAATAGT 1118932 Query 4545 AAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTT 4604 | || |||||||| ||| |||||||||||||||| |||| |||||||||||||||| Sbjct 1118933 AGGCATGCAAAATCGGTATGTAAACCTTCGTCTCTGCAGATCAATTCGTTAGAAAACGTT 1118992 Query 4605 A 4605 | Sbjct 1118993 A 1118993 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427049558362664