Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F001029055.1_202015-06- 17] 8 sequences; 11,524,969 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq5 286 5e-72 seq8 208 1e-48 seq1 113 6e-20 >seq5 Length=1457367 Score = 286 bits (316), Expect = 5e-72 Identities = 424/595 (71%), Gaps = 12/595 (2%) Strand=Plus/Plus Query 48140 ACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 48199 |||||||||||| ||| | |||||||||||| | || |||||||||||||| || || Sbjct 1119097 ACATGCAAAATCGGTATGTAAACCTTCATCTCTGCAGATCAATTCGTTAGAAAACGTTAG 1119156 Query 48200 ACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAA 48259 ||| |||||||| || || || | ||| || || || || || || || |||||||| Sbjct 1119157 ACCTGGCATTAGACCTTTCTTCTTCAACCAGAAGATAGCAGCAAAGGAACCTGAAAAGAA 1119216 Query 48260 TATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTTCGTTGT---G 48316 || ||||| | ||| ||||| || | ||||||| || | | | ||| ||| | Sbjct 1119217 AATACCTTCAATGGCAGCAAAAGCAACCAATCTCTCTGCGAAGATAGATTCACTGTCCTG 1119276 Query 48317 TATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACA-AGGCATTGTTTCTATAGCAT 48375 ||||| | ||||| || ||||||| ||||| | ||| || |||| || |||| Sbjct 1119277 AATCCATCTGATAGCCCATTCGGCCTTCT-CTTTAATCTGAGGAATGTTTTCGATCGCAT 1119335 Query 48376 TAAAGAGAAAGtttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATACA 48435 | || | || | |||| || ||| || | |||||||| ||||| || ||| Sbjct 1119336 TGAACAAGAAATCGCTTTCCTTTGGATCCTTGATATAAGTATCAATTAACAGGGAATAGG 1119395 Query 48436 TTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGA 48495 | || |||||||| ||||| || || || || || ||||||||| | ||||||| | Sbjct 1119396 TCTCTGAGTGAATGTTTTCCATCATGATTTGGAAACCATAAAAACATTTAGCTTCTGGAA 1119455 Query 48496 TCTGTACCTCCGTAC--AAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGC 48553 | || || || | || ||| || ||| | ||||||||||||||||| |||||| || Sbjct 1119456 TTTGCACTTCTGCACTGAAATTC--TCAACTAAATTCTCATTTACTATACCATCAGAGGC 1119513 Query 48554 AGCAAAAAATGCTAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCA---GTTTATT 48610 |||||| || || || ||| | || ||| || ||||||| | ||| | ||||| Sbjct 1119514 AGCAAAGAAGGCCAAGACACGGGAGATGAAAAATCTTTCGTTCTCATTCATACGGTTATT 1119573 Query 48611 CCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGC 48670 ||| |||| ||||| || |||| ||| | ||||| || ||||| || || |||||||| Sbjct 1119574 CCAATCATGAATATCCTTCGATAGATCAATCTCTTCGGCCGTCCAGAACGAAGCCTCTGC 1119633 Query 48671 TTTTTTATACATATTCCATATATCACTGTATTGGATTGGGAAAATAACAAATCTA 48725 | | |||||| | ||| || ||| ||||| ||||||||| | |||||||||| Sbjct 1119634 TCTCTTATACGCTTGCCAAATCTCATGGTATTTGATTGGGAATAGAACAAATCTA 1119688 >seq8 Length=940994 Score = 208 bits (230), Expect = 1e-48 Identities = 385/560 (69%), Gaps = 6/560 (1%) Strand=Plus/Plus Query 78261 CGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGT 78320 ||||| || |||| || || || || || || ||||||| || | ||| || Sbjct 325640 CGAATGTTGTGAATGTGTAAACCAATACCACCAGCGGTCTTAGAAATCATAGCACATTCC 325699 Query 78321 TTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAGCTA 78380 ||||| |||||||| |||||||| || ||||||| ||||| | || ||||| | Sbjct 325700 TTCAAAGTATCGTAAATACCCTCGATGGAGTCATCCTTCATGGCGATTAGGAAACATGAA 325759 Query 78381 GACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCAT 78440 ||||| ||| | | ||| || ||||| || | || ||||| ||||| | || || Sbjct 325760 GACATCTGAGGGCGTGGAGTACCAGCATTGAAAAGAGTTGGAGAAGCATGAATGAAGTAT 325819 Query 78441 TTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGTCCCATTGATGAATTCCT 78500 | || | ||||| || || |||||||| || || ||||| |||||| || Sbjct 325820 CTCAAGGACATCAGATTATAAGTCTCAATAGCAGACTCGATGTCGTCACCATGAATACCA 325879 Query 78501 ACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTT-ATTATTTATTTTCAA 78559 || || || | ||| | |||||| ||||| | |||| | | ||| | |||||| ||| Sbjct 325880 ACAGCAACTCTCATAATCATATGTTGAGGACGTTCAGC-GACTTCACCATTTATCCTCAG 325938 Query 78560 CAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCTCTCG 78617 || || || |||| |||||| || |||||||||||| | ||||| ||||| || Sbjct 325939 CAGATAAGAACGCTCCAGAGTTTTGAACCCAAAATAGTTGAAGTTGAAA--TCTCTATCA 325996 Query 78618 TAAATAATAACAGAATTTAGTTTATCTTTGTATTTGGTAACAATATCCATGACAGTAGTT 78677 || | |||| |||| || || | ||| || | |||| | ||||| ||||| || Sbjct 325997 TACACAATAGCAGAGTTCAGCTCATCCTTATGTTTGTTGACAATGTCCATAACCTCTTGC 326056 Query 78678 GAAATAATAGGAGATCGTACACCATTTTTAGGATTAACATAGTTAAATAAATCTTCCATT 78737 || || |||||||| | || || || || || || |||||||| || || || || Sbjct 326057 GAGATCATAGGAGAATGAACCCCGTTCTTTGGGTTCACATAGTTGAACAATTCACTCACA 326116 Query 78738 ACATCACTAAATAGtttttttGTTTCCTTGTGTAGATTAGATACAGCTATTCTTGCAGCT 78797 || | | ||| |||| | || | |||||| | |||||| | ||||||||| || || Sbjct 326117 ACCTGAGAAAACTGTTTAGTAGTCTGCTTGTGCAAATTAGAGATAGCTATTCTAGCGGCC 326176 Query 78798 AGAATAGCATAATCAGGATg 78817 | | |||||||||||||||| Sbjct 326177 AAAGTAGCATAATCAGGATG 326196 Score = 150 bits (166), Expect = 2e-31 Identities = 361/541 (67%), Gaps = 9/541 (2%) Strand=Plus/Plus Query 76771 TCTTATCCAATGTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACATAC 76830 |||| || | || || ||||| | || ||| |||| || ||| | || |||||||||| Sbjct 323423 TCTTGTCAATGGTGAATTGAATAGCAGCAGAAGCGGCTTGTGTTCTCAGGTAGTACATAC 323482 Query 76831 CAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAG 76890 |||| || | |||| |||| |||||||||||||| || |||| ||| | | | Sbjct 323483 CAGTCTTCAAACCCTTCTTCCAACCGTAGAAATGCATACTAGTCAATTTACCCATAGTTG 323542 Query 76891 GATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCG 76950 || | || ||||| |||| || || ||||||||| || | | | |||||| | Sbjct 323543 GAGCACGGATGTGAATGTTCAATGATTGGGACTGATCGATGTAAACAGCACGATCAGCTG 323602 Query 76951 CCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATAT 77010 |||| | || || || ||||||| |||||||||| ||| ||| | | | || | | Sbjct 323603 CCATCTCGATGATAGTTTTTTGAGAGATTTCCCAAACAGTCTTGTACAAATCCTTTAGTT 323662 Query 77011 CATCTGGAAGGTT---TGTATTTTGAATGGAACCACCATCTGATATAAT-TGTATTCTTT 77066 | | |||| || | |||||| ||||| ||| ||| | || || ||| | ||| Sbjct 323663 CTTGAGGAATATTCGGTAGATTTTGGATGGAGCCATTATCAGTGATGATGTGT-TGCTTC 323721 Query 77067 ATATCATCATTCCACAATTTCCT--CTCTGTTAAAACTCTAAGGAGATGAGGATTAACTA 77124 ||| ||||| ||| | | ||| || ||| | | || | | ||| || || | Sbjct 323722 ATACTATCATCCCAGA--TACCTAGGTCGACCAAATCACGTAGCAAGTAAGGGTTGACAA 323779 Query 77125 TTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAG 77184 |||| ||||| || || || || | ||||| ||| ||||| || ||||| || | | Sbjct 323780 TTTGGAATTCACCGGATAACACACGACGAGAGTACATATTGGAAGTGTATGGCTCGAAAC 323839 Query 77185 ATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAAC 77244 | || |||| || | ||| || | ||| || ||||||||||| || |||| | ||| Sbjct 323840 ACTCGTTGTAACCTAGAATCTGGGAAGTCGACGCAGTTGGCATTGGGGCCAATAGCAAAG 323899 Query 77245 TATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTG 77304 ||||| | ||||| | |||| | | || | | | ||||||||| ||||| | Sbjct 323900 AGTTTCTAACACCATATTCCTTGATGCTTTTCTTCAAAGTGTCCCAATCCCATAGATCCG 323959 Query 77305 A 77305 | Sbjct 323960 A 323960 Score = 98.7 bits (108), Expect = 1e-15 Identities = 320/495 (65%), Gaps = 4/495 (1%) Strand=Plus/Plus Query 77755 ATTTGATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAA 77814 |||| ||||| |||| || | ||||||||||||| | || || | || || ||||| | Sbjct 324597 ATTTAATAGTACCCAAGTTCTTTTGGTTGCTCTTTATGTTACAGGCATCTTTGTAAAGCA 324656 Query 77815 TAAACGGAGTCCCGGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCTAGCTT 77874 | || || || || || || | || ||||| | |||| | ||| | | ||||| Sbjct 324657 TGAATGGGGTACCAGTCTCTGTTTGAGATTCCAAGATAGCGTACCACAGTTTTTGAGCTT 324716 Query 77875 TTATCATAGATTTGTATCGCCTCTCTCTTTCATATTGAGT--ATATAGCCGTTCAAATTC 77932 | || | ||| || | | | || | | || ||||| ||||||||| Sbjct 324717 TGATAGTC--TTTCTACCACGACCTTCAGCGACGTAACGTTCATATAAGGCTTCAAATTC 324774 Query 77933 ATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACC 77992 ||| || |||||||| ||| || || |||| |||| | | ||| | ||| ||||| Sbjct 324775 ATCACCATAAACATCAGACAAACCTGGAGCTTCACTTGGAGAGAACAAAGTCCATTCACC 324834 Query 77993 ATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCG 78052 || || | ||| |||||||| || | ||| || ||||| || || || | ||||| Sbjct 324835 ATTCTCTTGAACACGTTTCATGAACAAATCTGGAATCCAGAGGGCTGGGAACAAATCTCT 324894 Query 78053 GGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGA 78112 | | | ||||| || || ||||| | ||| | || || | || || | Sbjct 324895 TGCACGAATCTCTTCCTTACCGTGGTTCTTCCGGATATCTATGAAATCAAAGATGTCTGC 324954 Query 78113 ATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTAT 78172 ||||||||||| | || | || | | | || || | ||| ||||| || ||||| | Sbjct 324955 GTGCCATGGTTCCAAGTACAAAGCGAAAGCACCTGGCCTTTTGTTACCACCTTGATCCAC 325014 Query 78173 ATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATT 78232 ||| | || ||||| || | || | | ||| || || | ||||| || || || || Sbjct 325015 ATAACGAGCAGTGTTGTTGAAGACACGTACCATGGGGATCAACCCGTTCGAAGTACCGTT 325074 Query 78233 TGTTCCAGAAATATA 78247 || || | |||||| Sbjct 325075 AGTACCTGCAATATA 325089 >seq1 Length=1865156 Score = 113 bits (124), Expect = 6e-20 Identities = 195/281 (69%), Gaps = 2/281 (1%) Strand=Plus/Plus Query 77902 TTTCATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGC 77961 ||||||| || ||||| |||||||| | || | ||||| | ||||||| Sbjct 1271780 TTTCATAATGCTCATATAAGTCATCAAATTCTTTGCCGTACACATCGCATAGTCCAGGGG 1271839 Query 77962 ATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGAT 78021 |||| ||| | | ||| |||| || |||| | || || |||| || || | Sbjct 1271840 CCTCATCTGGACTAAACAAACACCAATCGCCATTGGATTCGACCCGCCTCATGAACAGGT 1271899 Query 78022 CAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCT 78081 |||||||||| || |||| ||| ||||||| || ||| |||||| || || |||| Sbjct 1271900 CAGGTATCCACAGCGCAAAAAACAGATCTCTGGCTCTCATTTCTTCTTTACCGTGGTTCT 1271959 Query 78082 TTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCCATAA 78141 || ||| | ||||| || | || || | ||||||||| || ||||||| ||| |||| Sbjct 1271960 TTCGAAGCTGTAGAAAATCAAGGATGTCCGCATGCCATGGCTCGAGATATA-TGCAATAA 1272018 Query 78142 -CTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGC 78181 |||| || | || || || |||||||||| |||||| || Sbjct 1272019 GCTCCGGGCCTCTTGTTGCCACCCTGATCTACATATCTTGC 1272059 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694668730533120