Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F001029055.1_202015-06- 17] 8 sequences; 11,524,969 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq5 277 3e-69 seq8 161 1e-34 seq1 111 2e-19 >seq5 Length=1457367 Score = 277 bits (306), Expect = 3e-69 Identities = 422/595 (71%), Gaps = 12/595 (2%) Strand=Plus/Plus Query 46629 ACATGCAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 46688 |||||||||||| ||| | ||||||||||| | || |||||||||||||| || || Sbjct 1119097 ACATGCAAAATCGGTATGTAAACCTTCATCTCTGCAGATCAATTCGTTAGAAAACGTTAG 1119156 Query 46689 CCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAA 46748 || |||||||| || ||| || | ||| || ||||| || || || || |||||||| Sbjct 1119157 ACCTGGCATTAGACCTTTCTTCTTCAACCAGAAGATAGCAGCAAAGGAACCTGAAAAGAA 1119216 Query 46749 TATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATTAT---G 46805 || ||||| | || || || || || | ||||||| || | | | ||| | | | Sbjct 1119217 AATACCTTCAATGGCAGCAAAAGCAACCAATCTCTCTGCGAAGATAGATTCACTGTCCTG 1119276 Query 46806 AATCCACCTTTGAGCCCAATCAGCCTTTTTCTTTACACA-AGGCATTGTTTCTATAGCAT 46864 |||||| || |||||| || ||||| | ||||| | ||| || |||| || |||| Sbjct 1119277 AATCCATCTGATAGCCCATTCGGCCTTCT-CTTTAATCTGAGGAATGTTTTCGATCGCAT 1119335 Query 46865 TAAAGAGAAAGtttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTATACA 46924 | || | || | |||| | ||| || | ||| ||||| ||||| || ||| Sbjct 1119336 TGAACAAGAAATCGCTTTCCTTTGGATCCTTGATATAAGTATCAATTAACAGGGAATAGG 1119395 Query 46925 TTTCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAA 46984 | ||||| ||||||||||| || || || || || ||||||||| | ||||| | || Sbjct 1119396 TCTCTGAGTGAATGTTTTCCATCATGATTTGGAAACCATAAAAACATTTAGCTTCTGGAA 1119455 Query 46985 TCTGTACCTCTGTAC--AAAATCGTTCAGACAAATTCTCATTCACTATTCCATCACTAGC 47042 | || || |||| || ||| || ||| ||||||||||| ||||| |||||| || Sbjct 1119456 TTTGCACTTCTGCACTGAAATTC--TCAACTAAATTCTCATTTACTATACCATCAGAGGC 1119513 Query 47043 AGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGTAGTCA---GTTTATT 47099 |||||| || ||||| ||| | || ||| || |||| | | ||| | ||||| Sbjct 1119514 AGCAAAGAAGGCCAAGACACGGGAGATGAAAAATCTTTCGTTCTCATTCATACGGTTATT 1119573 Query 47100 CCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGC 47159 ||| |||| ||||| || |||| ||| | ||||| || |||||||| || |||||||| Sbjct 1119574 CCAATCATGAATATCCTTCGATAGATCAATCTCTTCGGCCGTCCAGAACGAAGCCTCTGC 1119633 Query 47160 TTTTTTATACATATTCCATATATCACGATATTGGATCGGAAAAATAACAAATCTA 47214 | | |||||| | ||| || ||| | |||| ||| || || | |||||||||| Sbjct 1119634 TCTCTTATACGCTTGCCAAATCTCATGGTATTTGATTGGGAATAGAACAAATCTA 1119688 >seq8 Length=940994 Score = 161 bits (178), Expect = 1e-34 Identities = 362/539 (67%), Gaps = 6/539 (1%) Strand=Plus/Plus Query 76877 CCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCC 76936 || || || || || | ||||| || | |||||| ||||| || || || || ||| Sbjct 325661 CCAATACCACCAGCGGTCTTAGAAATCATAGCACATTCCTTCAAAGTATCGTAAATACCC 325720 Query 76937 TCTATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTT 76996 || || |||||| ||||| | || ||||| |||||| ||| | | ||| Sbjct 325721 TCGATGGAGTCATCCTTCATGGCGATTAGGAAACATGAAGACATCTGAGGGCGTGGAGTA 325780 Query 76997 CCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTAT 77056 || ||||| || | || ||||| |||||| |||| || | || | ||||| || Sbjct 325781 CCAGCATTGAAAAGAGTTGGAGAAGCATGAATGAAGTATCTCAAGGACATCAGATTATAA 325840 Query 77057 GTTTCAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAACATA 77116 || |||||| | | || || || |||||| || ||||| || | ||| | |||| Sbjct 325841 GTCTCAATAGCAGACTCGATGTCGTCACCATGAATACCAACAGCAACTCTCATAATCATA 325900 Query 77117 TGCTGAGGTCGTTCTACAGTCTT-ATTATTTATTTTCAACAAGTATGATTTTTCCAAAGT 77175 || ||||| ||||| | | ||| | |||||| ||| || || || |||| ||| Sbjct 325901 TGTTGAGGACGTTCAGC-GACTTCACCATTTATCCTCAGCAGATAAGAACGCTCCAGAGT 325959 Query 77176 TTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCTTTCGTAAATAATAACCGAATTTAGT 77233 ||| || |||||||||||| | ||||| ||||| || || | |||| | || || || Sbjct 325960 TTTGAACCCAAAATAGTTGAAGTTGAAA--TCTCTATCATACACAATAGCAGAGTTCAGC 326017 Query 77234 TTGTCCTTATATTTGGTAACAATATCCATGACAGTGGTAGAAATAATTGGAGATCGTATT 77293 | ||||||| |||| | ||||| ||||| || || || || ||||| | | Sbjct 326018 TCATCCTTATGTTTGTTGACAATGTCCATAACCTCTTGCGAGATCATAGGAGAATGAACC 326077 Query 77294 CCATTTTTAGGATTAACATAGTTAAATAAGTCTTCCATTACGTCGCTAAATAGttttttt 77353 || || || || || |||||||| || || || || || | ||| |||| | Sbjct 326078 CCGTTCTTTGGGTTCACATAGTTGAACAATTCACTCACAACCTGAGAAAACTGTTTAGTA 326137 Query 77354 GTTTCCTTGTGTAGATTCGATACGGCTATTCTAGCAGCTAGAATTGCATAGTCAGGATG 77412 || | |||||| | ||| || | ||||||||||| || | | | ||||| |||||||| Sbjct 326138 GTCTGCTTGTGCAAATTAGAGATAGCTATTCTAGCGGCCAAAGTAGCATAATCAGGATG 326196 Score = 140 bits (154), Expect = 5e-28 Identities = 328/493 (67%), Gaps = 4/493 (1%) Strand=Plus/Plus Query 76352 TTGATAGTTCCAAGATTTTGTTGGTTGCTCTTTTTGTTACATGAGTCCTTATAAAGAACA 76411 || ||||| || | || | ||||||||||||| ||||||| | || || ||||| | Sbjct 324599 TTAATAGTACCCAAGTTCTTTTGGTTGCTCTTTATGTTACAGGCATCTTTGTAAAGCATG 324658 Query 76412 AACGGAGTTCCAGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCTAGCTTTT 76471 || || || ||||| || | || ||||| | |||| | ||| | | |||||| Sbjct 324659 AATGGGGTACCAGTCTCTGTTTGAGATTCCAAGATAGCGTACCACAGTTTTTGAGCTTTG 324718 Query 76472 ATTATAGATTTGTATCGCTTCTCTCTTTCA--TATTGTGTATATAACCGTTCAAATTCAT 76529 || | ||| || | | | || | || || |||||| ||||||||||| Sbjct 324719 ATAGTC--TTTCTACCACGACCTTCAGCGACGTAACGTTCATATAAGGCTTCAAATTCAT 324776 Query 76530 CTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGACCACTCACCAT 76589 | || |||||||| |||||| ||| |||| | ||| | | ||| | ||| ||||||| Sbjct 324777 CACCATAAACATCAGACAAACCTGGAGCTTCACTTGGAGAGAACAAAGTCCATTCACCAT 324836 Query 76590 CTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGG 76649 || | ||| |||||||| || | ||| || ||||| || || || | ||||| | Sbjct 324837 TCTCTTGAACACGTTTCATGAACAAATCTGGAATCCAGAGGGCTGGGAACAAATCTCTTG 324896 Query 76650 TTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAAT 76709 | | ||||| || || ||||| | ||||| ||| || | || || | | Sbjct 324897 CACGAATCTCTTCCTTACCGTGGTTCTTCCGGATATCTATGAAATCAAAGATGTCTGCGT 324956 Query 76710 GCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATAT 76769 |||||||||| | || | || | | |||| || | ||| ||||| || ||||| | || Sbjct 324957 GCCATGGTTCCAAGTACAAAGCGAAAGCACCTGGCCTTTTGTTACCACCTTGATCCACAT 325016 Query 76770 ATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTG 76829 | | |||||||| || | || | | ||| || || | ||||| || ||||| || | Sbjct 325017 AACGAGCAGTGTTGTTGAAGACACGTACCATGGGGATCAACCCGTTCGAAGTACCGTTAG 325076 Query 76830 TTCCAGAAATATA 76842 | || | |||||| Sbjct 325077 TACCTGCAATATA 325089 Score = 138 bits (152), Expect = 2e-27 Identities = 356/539 (66%), Gaps = 5/539 (1%) Strand=Plus/Plus Query 75366 TCTTATCCAACGTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTACATAC 75425 |||| || | ||||| ||||| | || || || | || ||| | || |||||||||| Sbjct 323423 TCTTGTCAATGGTGAATTGAATAGCAGCAGAAGCGGCTTGTGTTCTCAGGTAGTACATAC 323482 Query 75426 CAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACTCG 75485 |||| || | |||| |||| |||||||||||||| || || | ||| | | | Sbjct 323483 CAGTCTTCAAACCCTTCTTCCAACCGTAGAAATGCATACTAGTCAATTTACCCATAGTTG 323542 Query 75486 GATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCG 75545 || | || ||||| |||| || || ||||||||| || | | | |||||| | Sbjct 323543 GAGCACGGATGTGAATGTTCAATGATTGGGACTGATCGATGTAAACAGCACGATCAGCTG 323602 Query 75546 CCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATAT 75605 |||| | || || || ||||||| |||||||||| ||| ||| | | | || | | Sbjct 323603 CCATCTCGATGATAGTTTTTTGAGAGATTTCCCAAACAGTCTTGTACAAATCCTTTAGTT 323662 Query 75606 CATCTGGAAGATT---TGTATTTTGAATGGATCCGCCATCAGATATAAT-TGTATTCTTG 75661 | | |||| ||| | |||||| ||||| || ||||| || || ||| | ||| Sbjct 323663 CTTGAGGAATATTCGGTAGATTTTGGATGGAGCCATTATCAGTGATGATGTGT-TGCTTC 323721 Query 75662 ATCTCATCATTCCACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACAATT 75721 || ||||| ||| | | ||| ||| | | || | | ||| || |||||| Sbjct 323722 ATACTATCATCCCAGATACCTAGGTCGACCAAATCACGTAGCAAGTAAGGGTTGACAATT 323781 Query 75722 TGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 75781 || ||||| || || || || | |||| ||| ||||| || ||||| || | | | Sbjct 323782 TGGAATTCACCGGATAACACACGACGAGAGTACATATTGGAAGTGTATGGCTCGAAACAC 323841 Query 75782 TCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTA 75841 || |||| || | ||| || | ||| || ||||| ||||| || |||| | ||| Sbjct 323842 TCGTTGTAACCTAGAATCTGGGAAGTCGACGCAGTTGGCATTGGGGCCAATAGCAAAGAG 323901 Query 75842 TTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGA 75900 ||||| | ||||| | |||| | | || | | | ||||||||| ||||| || Sbjct 323902 TTTCTAACACCATATTCCTTGATGCTTTTCTTCAAAGTGTCCCAATCCCATAGATCCGA 323960 >seq1 Length=1865156 Score = 111 bits (122), Expect = 2e-19 Identities = 196/283 (69%), Gaps = 2/283 (1%) Strand=Plus/Plus Query 76497 TTTCATATTGTGTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAACCAGGAC 76556 ||||||| || |||||| |||||||| | || | ||||| | ||||| Sbjct 1271780 TTTCATAATGCTCATATAAGTCATCAAATTCTTTGCCGTACACATCGCATAGTCCAGGGG 1271839 Query 76557 ATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCATAAAGAGAT 76616 |||| |||| | ||| |||| || |||| | ||||| |||| || || | Sbjct 1271840 CCTCATCTGGACTAAACAAACACCAATCGCCATTGGATTCGACCCGCCTCATGAACAGGT 1271899 Query 76617 CAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCT 76676 |||||||||| || |||| ||| ||||||| || ||| |||||| || || |||| Sbjct 1271900 CAGGTATCCACAGCGCAAAAAACAGATCTCTGGCTCTCATTTCTTCTTTACCGTGGTTCT 1271959 Query 76677 TTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATAA 76736 || ||| | ||| || || | || || | ||||||||| || |||||||| || |||| Sbjct 1271960 TTCGAAGCTGTAGAAAATCAAGGATGTCCGCATGCCATGGCTCGAGATATAT-GCAATAA 1272018 Query 76737 -CACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAG 76778 | || || | || || || |||||||||| |||||| |||| Sbjct 1272019 GCTCCGGGCCTCTTGTTGCCACCCTGATCTACATATCTTGCAG 1272061 Score = 91.5 bits (100), Expect = 2e-13 Identities = 227/338 (67%), Gaps = 10/338 (3%) Strand=Plus/Plus Query 76699 AATATCAGAATGCCATGGTTCTAGATATATCGCCATAA-CACCCGGTCGTTTATTACCTC 76757 |||||| | ||||||||| || ||||| || || |||| | || |||| || || || | Sbjct 1272162 AATATCCGCATGCCATGGCTCGAGATAAAT-GCAATAAGCTCCGGGTCTCTTGTTGCCAC 1272220 Query 76758 CCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAG 76817 ||||||||| |||||| ||||||||||| |||| | | |||||||| | |||| | | Sbjct 1272221 CCTGATCTACATATCTTGCAGTGTTATTGAAAACGCGAAGCATTGGAACCAAGCCGCTGG 1272280 Query 76818 ATGTACCATTTGTTCCAGAAATATAACTTCCACA--TGCACGAATATTACTAATAGATAG 76875 | |||||| | || | |||||| || || || | ||| || || | || Sbjct 1272281 ACACACCATTGCTACCTG--ATATAAGCGCCCCATTTGATCTAATGTTGGAAACATGAAG 1272338 Query 76876 GCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCAT--AGATG 76933 ||| || || |||| ||| || || | | | | || | ||||| | | || Sbjct 1272339 GCCAATACCACCTGAAGCTTTGGAAATCATGG--CTGTCTTGTGAAGTGTCTTGAAAATA 1272396 Query 76934 CCCTCTATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACA 76993 || |||||| || || ||||| | ||||||||| |||| | || | || Sbjct 1272397 CCATCTATAGAGTCCTCTATCATTCCCACAAGAAAACATGACGACAAGTACTGGTTCACT 1272456 Query 76994 GTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAA 77031 || |||||||| || || || || || |||||| |||| Sbjct 1272457 GTACCTGCATTGAATAAAGTCGGTGAGGCATGAATGAA 1272494 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712934328706560