Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F001029055.1_202015-06-
17] 8 sequences; 11,524,969 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq5 277 3e-69
seq8 161 1e-34
seq1 111 2e-19
>seq5
Length=1457367
Score = 277 bits (306), Expect = 3e-69
Identities = 422/595 (71%), Gaps = 12/595 (2%)
Strand=Plus/Plus
Query 46629 ACATGCAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 46688
|||||||||||| ||| | ||||||||||| | || |||||||||||||| || ||
Sbjct 1119097 ACATGCAAAATCGGTATGTAAACCTTCATCTCTGCAGATCAATTCGTTAGAAAACGTTAG 1119156
Query 46689 CCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAA 46748
|| |||||||| || ||| || | ||| || ||||| || || || || ||||||||
Sbjct 1119157 ACCTGGCATTAGACCTTTCTTCTTCAACCAGAAGATAGCAGCAAAGGAACCTGAAAAGAA 1119216
Query 46749 TATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATTAT---G 46805
|| ||||| | || || || || || | ||||||| || | | | ||| | | |
Sbjct 1119217 AATACCTTCAATGGCAGCAAAAGCAACCAATCTCTCTGCGAAGATAGATTCACTGTCCTG 1119276
Query 46806 AATCCACCTTTGAGCCCAATCAGCCTTTTTCTTTACACA-AGGCATTGTTTCTATAGCAT 46864
|||||| || |||||| || ||||| | ||||| | ||| || |||| || ||||
Sbjct 1119277 AATCCATCTGATAGCCCATTCGGCCTTCT-CTTTAATCTGAGGAATGTTTTCGATCGCAT 1119335
Query 46865 TAAAGAGAAAGtttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTATACA 46924
| || | || | |||| | ||| || | ||| ||||| ||||| || |||
Sbjct 1119336 TGAACAAGAAATCGCTTTCCTTTGGATCCTTGATATAAGTATCAATTAACAGGGAATAGG 1119395
Query 46925 TTTCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAA 46984
| ||||| ||||||||||| || || || || || ||||||||| | ||||| | ||
Sbjct 1119396 TCTCTGAGTGAATGTTTTCCATCATGATTTGGAAACCATAAAAACATTTAGCTTCTGGAA 1119455
Query 46985 TCTGTACCTCTGTAC--AAAATCGTTCAGACAAATTCTCATTCACTATTCCATCACTAGC 47042
| || || |||| || ||| || ||| ||||||||||| ||||| |||||| ||
Sbjct 1119456 TTTGCACTTCTGCACTGAAATTC--TCAACTAAATTCTCATTTACTATACCATCAGAGGC 1119513
Query 47043 AGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGTAGTCA---GTTTATT 47099
|||||| || ||||| ||| | || ||| || |||| | | ||| | |||||
Sbjct 1119514 AGCAAAGAAGGCCAAGACACGGGAGATGAAAAATCTTTCGTTCTCATTCATACGGTTATT 1119573
Query 47100 CCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGC 47159
||| |||| ||||| || |||| ||| | ||||| || |||||||| || ||||||||
Sbjct 1119574 CCAATCATGAATATCCTTCGATAGATCAATCTCTTCGGCCGTCCAGAACGAAGCCTCTGC 1119633
Query 47160 TTTTTTATACATATTCCATATATCACGATATTGGATCGGAAAAATAACAAATCTA 47214
| | |||||| | ||| || ||| | |||| ||| || || | ||||||||||
Sbjct 1119634 TCTCTTATACGCTTGCCAAATCTCATGGTATTTGATTGGGAATAGAACAAATCTA 1119688
>seq8
Length=940994
Score = 161 bits (178), Expect = 1e-34
Identities = 362/539 (67%), Gaps = 6/539 (1%)
Strand=Plus/Plus
Query 76877 CCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCC 76936
|| || || || || | ||||| || | |||||| ||||| || || || || |||
Sbjct 325661 CCAATACCACCAGCGGTCTTAGAAATCATAGCACATTCCTTCAAAGTATCGTAAATACCC 325720
Query 76937 TCTATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTT 76996
|| || |||||| ||||| | || ||||| |||||| ||| | | |||
Sbjct 325721 TCGATGGAGTCATCCTTCATGGCGATTAGGAAACATGAAGACATCTGAGGGCGTGGAGTA 325780
Query 76997 CCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTAT 77056
|| ||||| || | || ||||| |||||| |||| || | || | ||||| ||
Sbjct 325781 CCAGCATTGAAAAGAGTTGGAGAAGCATGAATGAAGTATCTCAAGGACATCAGATTATAA 325840
Query 77057 GTTTCAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAACATA 77116
|| |||||| | | || || || |||||| || ||||| || | ||| | ||||
Sbjct 325841 GTCTCAATAGCAGACTCGATGTCGTCACCATGAATACCAACAGCAACTCTCATAATCATA 325900
Query 77117 TGCTGAGGTCGTTCTACAGTCTT-ATTATTTATTTTCAACAAGTATGATTTTTCCAAAGT 77175
|| ||||| ||||| | | ||| | |||||| ||| || || || |||| |||
Sbjct 325901 TGTTGAGGACGTTCAGC-GACTTCACCATTTATCCTCAGCAGATAAGAACGCTCCAGAGT 325959
Query 77176 TTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCTTTCGTAAATAATAACCGAATTTAGT 77233
||| || |||||||||||| | ||||| ||||| || || | |||| | || || ||
Sbjct 325960 TTTGAACCCAAAATAGTTGAAGTTGAAA--TCTCTATCATACACAATAGCAGAGTTCAGC 326017
Query 77234 TTGTCCTTATATTTGGTAACAATATCCATGACAGTGGTAGAAATAATTGGAGATCGTATT 77293
| ||||||| |||| | ||||| ||||| || || || || ||||| | |
Sbjct 326018 TCATCCTTATGTTTGTTGACAATGTCCATAACCTCTTGCGAGATCATAGGAGAATGAACC 326077
Query 77294 CCATTTTTAGGATTAACATAGTTAAATAAGTCTTCCATTACGTCGCTAAATAGttttttt 77353
|| || || || || |||||||| || || || || || | ||| |||| |
Sbjct 326078 CCGTTCTTTGGGTTCACATAGTTGAACAATTCACTCACAACCTGAGAAAACTGTTTAGTA 326137
Query 77354 GTTTCCTTGTGTAGATTCGATACGGCTATTCTAGCAGCTAGAATTGCATAGTCAGGATG 77412
|| | |||||| | ||| || | ||||||||||| || | | | ||||| ||||||||
Sbjct 326138 GTCTGCTTGTGCAAATTAGAGATAGCTATTCTAGCGGCCAAAGTAGCATAATCAGGATG 326196
Score = 140 bits (154), Expect = 5e-28
Identities = 328/493 (67%), Gaps = 4/493 (1%)
Strand=Plus/Plus
Query 76352 TTGATAGTTCCAAGATTTTGTTGGTTGCTCTTTTTGTTACATGAGTCCTTATAAAGAACA 76411
|| ||||| || | || | ||||||||||||| ||||||| | || || ||||| |
Sbjct 324599 TTAATAGTACCCAAGTTCTTTTGGTTGCTCTTTATGTTACAGGCATCTTTGTAAAGCATG 324658
Query 76412 AACGGAGTTCCAGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCTAGCTTTT 76471
|| || || ||||| || | || ||||| | |||| | ||| | | ||||||
Sbjct 324659 AATGGGGTACCAGTCTCTGTTTGAGATTCCAAGATAGCGTACCACAGTTTTTGAGCTTTG 324718
Query 76472 ATTATAGATTTGTATCGCTTCTCTCTTTCA--TATTGTGTATATAACCGTTCAAATTCAT 76529
|| | ||| || | | | || | || || |||||| |||||||||||
Sbjct 324719 ATAGTC--TTTCTACCACGACCTTCAGCGACGTAACGTTCATATAAGGCTTCAAATTCAT 324776
Query 76530 CTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGACCACTCACCAT 76589
| || |||||||| |||||| ||| |||| | ||| | | ||| | ||| |||||||
Sbjct 324777 CACCATAAACATCAGACAAACCTGGAGCTTCACTTGGAGAGAACAAAGTCCATTCACCAT 324836
Query 76590 CTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGG 76649
|| | ||| |||||||| || | ||| || ||||| || || || | ||||| |
Sbjct 324837 TCTCTTGAACACGTTTCATGAACAAATCTGGAATCCAGAGGGCTGGGAACAAATCTCTTG 324896
Query 76650 TTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAAT 76709
| | ||||| || || ||||| | ||||| ||| || | || || | |
Sbjct 324897 CACGAATCTCTTCCTTACCGTGGTTCTTCCGGATATCTATGAAATCAAAGATGTCTGCGT 324956
Query 76710 GCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATAT 76769
|||||||||| | || | || | | |||| || | ||| ||||| || ||||| | ||
Sbjct 324957 GCCATGGTTCCAAGTACAAAGCGAAAGCACCTGGCCTTTTGTTACCACCTTGATCCACAT 325016
Query 76770 ATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTG 76829
| | |||||||| || | || | | ||| || || | ||||| || ||||| || |
Sbjct 325017 AACGAGCAGTGTTGTTGAAGACACGTACCATGGGGATCAACCCGTTCGAAGTACCGTTAG 325076
Query 76830 TTCCAGAAATATA 76842
| || | ||||||
Sbjct 325077 TACCTGCAATATA 325089
Score = 138 bits (152), Expect = 2e-27
Identities = 356/539 (66%), Gaps = 5/539 (1%)
Strand=Plus/Plus
Query 75366 TCTTATCCAACGTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTACATAC 75425
|||| || | ||||| ||||| | || || || | || ||| | || ||||||||||
Sbjct 323423 TCTTGTCAATGGTGAATTGAATAGCAGCAGAAGCGGCTTGTGTTCTCAGGTAGTACATAC 323482
Query 75426 CAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACTCG 75485
|||| || | |||| |||| |||||||||||||| || || | ||| | | |
Sbjct 323483 CAGTCTTCAAACCCTTCTTCCAACCGTAGAAATGCATACTAGTCAATTTACCCATAGTTG 323542
Query 75486 GATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCG 75545
|| | || ||||| |||| || || ||||||||| || | | | |||||| |
Sbjct 323543 GAGCACGGATGTGAATGTTCAATGATTGGGACTGATCGATGTAAACAGCACGATCAGCTG 323602
Query 75546 CCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATAT 75605
|||| | || || || ||||||| |||||||||| ||| ||| | | | || | |
Sbjct 323603 CCATCTCGATGATAGTTTTTTGAGAGATTTCCCAAACAGTCTTGTACAAATCCTTTAGTT 323662
Query 75606 CATCTGGAAGATT---TGTATTTTGAATGGATCCGCCATCAGATATAAT-TGTATTCTTG 75661
| | |||| ||| | |||||| ||||| || ||||| || || ||| | |||
Sbjct 323663 CTTGAGGAATATTCGGTAGATTTTGGATGGAGCCATTATCAGTGATGATGTGT-TGCTTC 323721
Query 75662 ATCTCATCATTCCACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACAATT 75721
|| ||||| ||| | | ||| ||| | | || | | ||| || ||||||
Sbjct 323722 ATACTATCATCCCAGATACCTAGGTCGACCAAATCACGTAGCAAGTAAGGGTTGACAATT 323781
Query 75722 TGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 75781
|| ||||| || || || || | |||| ||| ||||| || ||||| || | | |
Sbjct 323782 TGGAATTCACCGGATAACACACGACGAGAGTACATATTGGAAGTGTATGGCTCGAAACAC 323841
Query 75782 TCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTA 75841
|| |||| || | ||| || | ||| || ||||| ||||| || |||| | |||
Sbjct 323842 TCGTTGTAACCTAGAATCTGGGAAGTCGACGCAGTTGGCATTGGGGCCAATAGCAAAGAG 323901
Query 75842 TTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGA 75900
||||| | ||||| | |||| | | || | | | ||||||||| ||||| ||
Sbjct 323902 TTTCTAACACCATATTCCTTGATGCTTTTCTTCAAAGTGTCCCAATCCCATAGATCCGA 323960
>seq1
Length=1865156
Score = 111 bits (122), Expect = 2e-19
Identities = 196/283 (69%), Gaps = 2/283 (1%)
Strand=Plus/Plus
Query 76497 TTTCATATTGTGTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAACCAGGAC 76556
||||||| || |||||| |||||||| | || | ||||| | |||||
Sbjct 1271780 TTTCATAATGCTCATATAAGTCATCAAATTCTTTGCCGTACACATCGCATAGTCCAGGGG 1271839
Query 76557 ATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCATAAAGAGAT 76616
|||| |||| | ||| |||| || |||| | ||||| |||| || || |
Sbjct 1271840 CCTCATCTGGACTAAACAAACACCAATCGCCATTGGATTCGACCCGCCTCATGAACAGGT 1271899
Query 76617 CAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCT 76676
|||||||||| || |||| ||| ||||||| || ||| |||||| || || ||||
Sbjct 1271900 CAGGTATCCACAGCGCAAAAAACAGATCTCTGGCTCTCATTTCTTCTTTACCGTGGTTCT 1271959
Query 76677 TTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATAA 76736
|| ||| | ||| || || | || || | ||||||||| || |||||||| || ||||
Sbjct 1271960 TTCGAAGCTGTAGAAAATCAAGGATGTCCGCATGCCATGGCTCGAGATATAT-GCAATAA 1272018
Query 76737 -CACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAG 76778
| || || | || || || |||||||||| |||||| ||||
Sbjct 1272019 GCTCCGGGCCTCTTGTTGCCACCCTGATCTACATATCTTGCAG 1272061
Score = 91.5 bits (100), Expect = 2e-13
Identities = 227/338 (67%), Gaps = 10/338 (3%)
Strand=Plus/Plus
Query 76699 AATATCAGAATGCCATGGTTCTAGATATATCGCCATAA-CACCCGGTCGTTTATTACCTC 76757
|||||| | ||||||||| || ||||| || || |||| | || |||| || || || |
Sbjct 1272162 AATATCCGCATGCCATGGCTCGAGATAAAT-GCAATAAGCTCCGGGTCTCTTGTTGCCAC 1272220
Query 76758 CCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAG 76817
||||||||| |||||| ||||||||||| |||| | | |||||||| | |||| | |
Sbjct 1272221 CCTGATCTACATATCTTGCAGTGTTATTGAAAACGCGAAGCATTGGAACCAAGCCGCTGG 1272280
Query 76818 ATGTACCATTTGTTCCAGAAATATAACTTCCACA--TGCACGAATATTACTAATAGATAG 76875
| |||||| | || | |||||| || || || | ||| || || | ||
Sbjct 1272281 ACACACCATTGCTACCTG--ATATAAGCGCCCCATTTGATCTAATGTTGGAAACATGAAG 1272338
Query 76876 GCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCAT--AGATG 76933
||| || || |||| ||| || || | | | | || | ||||| | | ||
Sbjct 1272339 GCCAATACCACCTGAAGCTTTGGAAATCATGG--CTGTCTTGTGAAGTGTCTTGAAAATA 1272396
Query 76934 CCCTCTATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACA 76993
|| |||||| || || ||||| | ||||||||| |||| | || | ||
Sbjct 1272397 CCATCTATAGAGTCCTCTATCATTCCCACAAGAAAACATGACGACAAGTACTGGTTCACT 1272456
Query 76994 GTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAA 77031
|| |||||||| || || || || || |||||| ||||
Sbjct 1272457 GTACCTGCATTGAATAAAGTCGGTGAGGCATGAATGAA 1272494
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712934328706560
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