Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F002214845.1_202017-07- 05] 56 sequences; 9,683,383 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq4 172 6e-38 >seq4 Length=1065440 Score = 172 bits (190), Expect = 6e-38 Identities = 565/871 (65%), Gaps = 23/871 (3%) Strand=Plus/Plus Query 16694 TTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCTCCATGAAATCAAAAGGATTA 16753 ||||||||||| || || || || | || || || ||||||||||||||||| || ||| Sbjct 810941 TTTTCGAAAAAATTGGTCTTACCAGCCAGCGAGATGTTCTCCATGAAATCAAATGGGTTA 811000 Query 16754 GTAGC--TGAAAATATTTTAGAGTACCCCAGTTCGGCGATTAATCTATCCGCTACAAATT 16811 || | |||||| || | | | ||| | || | | || |||||| || || || | Sbjct 811001 GTCACGTTGAAAAATTTCTTG--TTCCCGAAAGCGACCAGTAGTCTATCAGCGACGAACT 811058 Query 16812 CTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGACGTACCGGAAGAGCTTCCG 16871 | | || ||| ||| | ||| |||||| || | | | || || ||||| || Sbjct 811059 CAACGTACTGGTTCATCAGGTCGGCGTTCATACCCAATAAAGAAACGGGTAGAGCATCGA 811118 Query 16872 TCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAATACTAGCAACTCGTTCCTCGG 16931 | || | | | || || | || ||||| ||||||| | ||| | | || Sbjct 811119 TGAAGTACCTCTTTTCGATCTCGACGGCTTCAGTAATAATCTTT-----TCGATAAT-GG 811172 Query 16932 ACGG---TG---TATGTTTAAGATGTTTAAACATCAGACATGCGAAATCGCAATGTAATC 16985 | || || ||| || | ||| ||| | |||||||| |||||| |||||| | Sbjct 811173 AAGGATCTGGCTTATTCTTCAAATGAGCAAATAGTAGACATGCAAAATCGGTATGTAAAC 811232 Query 16986 CCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCT 17045 | || ||||||| ||| | |||||||||||| || | || ||||| ||| |||| Sbjct 811233 CTTCATCTCTGCAGATCAATTCGTTAGAAAACGTTAGACCTGGCATTAGACCTTTCTTCT 811292 Query 17046 TTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAACG 17105 | ||||| || || || || || || || |||||||| ||||| || | || || || | Sbjct 811293 TCAACCAGAAGATAGCAGCAAAGGAACCTGAAAAGAAAATACCTTCAATGGCAGCGAAAG 811352 Query 17106 CGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCATTTCTGCACCCACTCGG 17165 | | |||| || ||| | | | || ||| |||||||| | |||| |||| Sbjct 811353 CAACCAATCTCTCTGCGAAGATAGATTCACTGTCCTGAATCCATCTGATAGCCCATTCGG 811412 Query 17166 CTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAATAATTTCTCTTTTTCCTGTA 17225 | || | || || | || |||| || || || ||||| || |||||| | Sbjct 811413 CCTTCTCTTTAATCTGAGGAATGTTTTCAATCGCATTGAATAAGAAATCGCTTTCCTTTG 811472 Query 17226 GGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGG 17285 | || | ||||| ||||| || | ||| || | || ||||| ||||| ||||| Sbjct 811473 GATCCTTGATATAAGTATCAATTAACAGGGAATAGGTCTCTGAGTGAATGTTTTCCATCA 811532 Query 17286 CTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTC--CACGTAGAATCG 17343 || || || || || || ||| ||||| | ||||| ||||| ||| | | || Sbjct 811533 TGATTTGGAAACCATAGAAACATTTAGCTTCTGGAATTTGCACTTCTGCACTGAAATTC- 811591 Query 17344 TTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTT 17403 || ||| ||| || || || || || || || || || || ||||| | | | Sbjct 811592 -TCAACTAAATTCTCATTTACTATACCATCAGAGGCAGCAAAGAAGGCCAAGACACGGGA 811650 Query 17404 AATGAAATATTTTTCGTCCGGTGTAAGAACG---CGCCAGTCCTTTAAATCTTTGGATAT 17460 |||||| || |||||| | | | | | ||| || | | ||| || || | Sbjct 811651 GATGAAAAATCTTTCGTTCTCATTCATACGGTTATTCCAATCATGAATATCCTTCGACAG 811710 Query 17461 ATCCACTTCTTCGGGGGTCCAAAAACTAGCCACTGCCTTTTTATACATATTCCAAATATC 17520 ||| | ||||||| ||||| || |||| |||| | |||||| | |||||| || Sbjct 811711 ATCAATCTCTTCGGCCGTCCAGAACGAAGCCTCTGCTCTCTTATACGCTTGCCAAATCTC 811770 Query 17521 ATTGTATTGTATGGGGAATACAACATATCTA 17551 || ||||| || ||||||| |||| ||||| Sbjct 811771 ATGGTATTTGATTGGGAATAGAACAAATCTA 811801 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517545237718080