Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F002214845.1_202017-07- 05] 56 sequences; 9,683,383 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq2 205 7e-48 >seq2 Length=1385486 Score = 205 bits (226), Expect = 7e-48 Identities = 382/554 (69%), Gaps = 29/554 (5%) Strand=Plus/Plus Query 101678 TTAAGAGCATCAATGTGATCTACATAGATGTGAGCATCTCCTATAGTATGGATAAACTCT 101737 || |||||||| ||||||||| || | |||||||| || || ||||| |||||||| Sbjct 927254 TTGAGAGCATCGATGTGATCTTTGTAAACATGAGCATCACCCATGGTATGAATAAACTCA 927313 Query 101738 CCAGGCACTAGATTAGTGACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATG 101797 ||||| | | || |||||| |||| ||| || | ||| | ||| |||||| Sbjct 927314 CCAGGTTCCATATCGCAGACATGGGCAACCATCTTGGTCAGAAGCGCATACGATGCAATG 927373 Query 101798 TTAAATGGCACTCCTAACCCCATATCAGCTGATCTTTGATACAGTTGACAGGAAA----- 101852 || || |||||||||| ||||||||| ||||||||||||||| |||| |||| Sbjct 927374 TTGAAGGGCACTCCTAGTCCCATATCACAGGATCTTTGATACAGTAGACAAGAAAGTCTT 927433 Query 101853 -GCTTTCCAT---------CACAGACATAAAATTGACTTAATACATGACAAGGCGGCAAC 101902 ||||||||| || |||||| || ||| || |||||||| |||||||| Sbjct 927434 GGCTTTCCATTCTCAGGAAAACTGACATAGAACTGAGAAAAGACATGACATGGCGGCAAA 927493 Query 101903 ACCATTTTAGGAATGTCTGAAACATTCCAAGCACACATTAACATCCTTCTATCTGTAGGG 101962 |||| || | |||| |||||| |||| ||| | || ||||| || ||| || Sbjct 927494 GCCATCGATGGGAAATCTGGTGGATTCCATGCACTCATGATGATTCTTCTGTC-GTATGG 927552 Query 101963 TTTGTTTTTATAG-TATCA-ATCAACTGTTTTAATTGGTCAACTCCTTCTCCTTTATAAT 102020 ||||| || ||| | | | ||||| | ||||| |||| ||||| || | || | Sbjct 927553 ATTGTTCTT-TAGCTTTGAGATCAAATCGGCCAATTGATCAAATCCTTGGCCAGTGTAGT 927611 Query 102021 CGCGCCCAACACCT---TTATATTCTGCTCCGAAATGCCTCCACTGAAATCCATACACAG 102077 || || | | | || |||| || || ||||||||||| ||||||||||| || | Sbjct 927612 CG---TCATCGCATGTCTTGTATTTAGCACCAAAATGCCTCCATTGAAATCCATAAACCG 927668 Query 102078 GTCCAAGATCTCCTTCATCTCTGTCATAAAAACCAAGTTTATCTAAAAATGATCTAGATC 102137 | || | |||||| ||| ||| || | || || || ||||| | | |||||||| Sbjct 927669 GCCCCAAATCTCCCTCACGTCTCTCGTGCAATCCCAGCTTATCAAGGTACTCTCTAGATC 927728 Query 102138 CATTCGCATCCCAAATGTGCACGCCAGCTGCT--GATAGCTCTTTGCTGTCAGTAGATCC 102195 |||| | |||||||| | || || ||||| ||||||| || | |||||| | || Sbjct 927729 CATTTCCCTCCCAAATTTTGACCCC--CTGCTCAGATAGCTTCTTACCATCAGTACAACC 927786 Query 102196 TCTGATAAACCACA 102209 || ||||||| Sbjct 927787 AGAAATGAACCACA 927800 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361250953446056