Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F002214845.1_202017-07-
05] 56 sequences; 9,683,383 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq7 336 3e-87
seq4 251 8e-62
>seq7
Length=810710
Score = 336 bits (372), Expect = 3e-87
Identities = 1433/2258 (63%), Gaps = 37/2258 (2%)
Strand=Plus/Plus
Query 52798 CTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCC 52857
|||||| | ||||||||||| | ||| || |||| || || | || |||||||| ||
Sbjct 326295 CTTGTCAATGGTGAATTGAATAGCAGCAGAAGCGGCTTGTGTCCTCAGGTAGTACATACC 326354
Query 52858 CGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTTGTTAGTTTGGAATAACTCGG 52917
|| || | ||| |||| ||||| ||||||||||| || | ||| | | ||
Sbjct 326355 AGTCTTCAAACCCTTCTTCCAACCGTAGAAATGCATACTAGTCAATTTACCCATAGTTGG 326414
Query 52918 ATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGC 52977
| | || || || |||| ||||| ||||||||| | | | | || || ||
Sbjct 326415 AGCACGGATGTGAATGTTCAATGATTGGGACTGATCGATGTAAACAGCACGATCAGCTGC 326474
Query 52978 CATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATAT 53036
||| | ||||| || ||||| | |||||||||| ||| || || || || ||| | |
Sbjct 326475 CATCTCGATGATAGTTTTTTGAGAGATTTCCCAAACAGTCTTGTACAAATCCTTTAGT-T 326533
Query 53037 CTTCTGGAAGGTTTGT---ATTCTGAATAGATCCACCATCTACCATAATCCTATTCTTGA 53093
||| |||| || | ||| || || || ||| ||| || || | ||| |
Sbjct 326534 CTTGAGGAATATTCGGTAGATTTTGGATGGAGCCATTATCAGTGATGATGTGTTGCTTCA 326593
Query 53094 TCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTT 53153
| ||||| ||| | | ||| ||| | | || | | || || || | ||
Sbjct 326594 TACTATCATCCCAGATACCTAGGTCGACCAAATCACGTAGCAAGTAAGGGTTGACAATTT 326653
Query 53154 GAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACT 53213
| ||||| || || || || | |||| ||| ||||| || || || || | | |||
Sbjct 326654 GGAATTCACCGGATAACACACGACGAGAGTACATATTGGAAGTGTATGGCTCGAAACACT 326713
Query 53214 CATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTAT 53273
| || | || | ||| || | ||| || ||||| ||||| || |||| | ||| |
Sbjct 326714 CGTTGTAACCTAGAATCTGGGAAGTCGACGCAGTTGGCATTGGGGCCAATAGCAAAGAGT 326773
Query 53274 TTCTAAGACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACG 53333
|||||| ||| ||| |||| | | || | || ||||||| ||| |||||||| |
Sbjct 326774 TTCTAACACCATATTCCTTGATGCTTTTCTTCAAAGTGTCCCAATCCCATAGATCCGATG 326833
Query 53334 GTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATG 53393
|| || | |||||| | | | || ||| |||| |
Sbjct 326834 GTTTGGTGTTCCACAGATCGTACTGCAAAATACCTTGAGAGATTGGAGAACCTTCATAAG 326893
Query 53394 TATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAA 53453
| ||| ||||| ||||||| || | ||||| || || || | | ||| || |
Sbjct 326894 TGGAGTAAGGTCCATCCTTCTTCGCCAACTCACAGGAGGCTTCCAAAGAAGCGTGGTAGA 326953
Query 53454 TGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTTA 53513
| ||||||||||| | | |||||||| | ||||| | ||||||||| | |
Sbjct 326954 TAGTTTCGAAGATTTGGATGTTTAGATCCTTGGCTTCTTGAGACTCAAATGGAACACGCA 327013
Query 53514 AGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTAT 53573
| | |||||| |||| || || || | ||||| | | | |||||||| | |||| |||
Sbjct 327014 ACATCATAAACACGTCAGCCAAACCATTGACACCTAGAGCCATAGGTCTGTTTCTCATAT 327073
Query 53574 TAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGGTTTC 53633
||||| || |||||| |||| || || || || ||| || | || || | ||| |
Sbjct 327074 TAGAGTTTCTAGCTTCAGGAACTGGGTAGTAGTTTCGATCGATGACCTTGTTCAAGTTAC 327133
Query 53634 TGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATT-----GTC----CAT 53684
|| || ||| | | | | || ||| ||||||| | ||| |||
Sbjct 327134 GAGTGATAACCTTGGCAATTTTATGCAACTTGGCAAAATCATACCACTGGGTCTTACCAT 327193
Query 53685 CTATTACAAACATG--TTCA--------ATGCAATAGATGCCAGATTACAAACGGCTACC 53734
| || | ||| || | || | || || || |||| ||||||||||| |
Sbjct 327194 C-ATCAGCAACTTGAATACACGATGGTAAAGCGATGGAGGCCAAGTTACAAACGGCAGTC 327252
Query 53735 TCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCT 53794
|||| || | | || | | || ||| || | ||| | || ||||| ||
Sbjct 327253 TCATCAGGTGCTGAGTACTCAACGATTTCACAACACAAGTTAGAGGATTTAATGGTACCC 327312
Query 53795 AAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGCGTACCA 53854
|| || | ||| || |||||| | ||||| ||||| || ||||| |||||||| ||||||
Sbjct 327313 AAGTTCTTTTGGTTGCTCTTTATATTACAGGCATCTTTGTAAAGCATGAATGGAGTACCA 327372
Query 53855 GTTTCAATCTGGGATTCTATAATCGCTTTCCAGACGACACGAGCCTTTATTATAGATTTG 53914
|| || | || ||||| | || || | ||| | |||| || || | |||
Sbjct 327373 GTCTCTGTTTGAGATTCCAAGATAGCGTACCACAGTTTTTGAGCTTTGATAGTC--TTTC 327430
Query 53915 TATCTCTT--TTCTCTTTCGTATAGTGTATACAATCGTTCAAACTCGTCTCCCCAAACAT 53972
|| | | ||| |||| || |||||| |||||| || || || ||||||
Sbjct 327431 TACCACGACCTTCAGCGACGTAACGTTCATACAAGGCTTCAAATTCATCACCATAAACAT 327490
Query 53973 TGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTC 54032
||| || ||| |||| ||| | | ||| | ||| || || | || | || |
Sbjct 327491 CAGACAAACCTGGAGCTTCACTTGGAGAGAACAAAGTCCATTCACCATTCTCTTGAACAC 327550
Query 54033 GTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCT 54092
||||||| || | ||| |||||||| || ||| || | |||||| | | | || |
Sbjct 327551 GTTTCATGAACAAATCTGGAATCCAGAGGGCTGGGAACAAATCTCTTGCACGAATCTCTT 327610
Query 54093 CGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCA 54152
| || || ||||| | ||| | ||| | | || || | ||||| |||||||
Sbjct 327611 CCTTACCGTGGTTCTTCCGGATATCTATGAAATCAAAGATGTCTGCGTGCCATGGTTCCA 327670
Query 54153 AGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGT 54212
|||| | | | | | || |||| |||||| || || ||||| | || | ||| ||||
Sbjct 327671 AGTACAAAGCGAAAGCACCTGGCCTTTTGTTACCACCTTGATCCACATAACGAGCAGTGT 327730
Query 54213 TATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATAT 54272
| || | || | | ||| || || | || || || | ||| || || || | ||||
Sbjct 327731 TGTTGAAGACACGTACCATGGGGATCAACCCGTTCGAAGTACCGTTAGTACCTGCAATAT 327790
Query 54273 AGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGA 54332
| || | | |||||| || || | ||| || || || || | ||||| |
Sbjct 327791 ATGAACCCGTAGAACGAATGTTGTGTATGTGCAAACCAATACCACCAGCGGTCTTAGAAA 327850
Query 54333 TTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAA 54392
| | || ||| || || ||||| || || ||||| || |||||| ||||| |
Sbjct 327851 TCATAGCACATTCCTTCAAAGTATCGTAAATACCCTCGATGGAGTCATCCTTCATGGCGA 327910
Query 54393 GTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAG 54452
||| ||||| |||||| || | || ||| || ||||| || | || |||||||
Sbjct 327911 TTAGGAAACATGAAGACATCTGAGGGCGTGGAGTACCAGCATTGAAAAGAGTTGGAGAAG 327970
Query 54453 CGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTATATCCC 54512
| || | || || | || | ||||| || ||||| ||||| || || || ||
Sbjct 327971 CATGAATGAAGTATCTCAAGGACATCAGATTATAAGTCTCAATAGCAGACTCGATGTCGT 328030
Query 54513 ATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGT 54572
|||||| || || || || | ||| | ||| || ||||| | |||| ||| |
Sbjct 328031 CACCATGAATACCAACAGCAACTCTCATAATCATATGTTGAGGACGTTCAGCGACTTCAC 328090
Query 54573 TGTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGA 54630
||||| |||||| || || |||| |||||| || ||||||||||| | |||
Sbjct 328091 CATTTATCCTCAGCAGATAAGAACGCTCCAGAGTTTTGAACCCAAAATAGTTAAAGTTGA 328150
Query 54631 AAAGTCTCGTTCGTAAATAATAACTGAGTTGAGTTTATCCTTATATTTGTTAACTACATC 54690
|| |||| || |||| |||| | ||||| | | |||||||| |||||| || | ||
Sbjct 328151 AA--TCTCTATCATAAACAATAGCAGAGTTCAACTCATCCTTATGTTTGTTGACGATGTC 328208
Query 54691 CATGGTAATACTT--GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATAGTTA 54748
||| | ||| || || || |||||||| ||| || || || || ||||||||
Sbjct 328209 CAT--AACCTCTTGCGAGATCATAGGAGAATGAACCCCGTTCTTTGGGTTCACATAGTTG 328266
Query 54749 AATAAATCCTTCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACG 54808
|| || || ||| || | | ||| |||| | || | ||||| | ||| || |
Sbjct 328267 AACAATTCACTCACAACCTGAGAAAACTGTTTAGTAGTCTGCTTGTGCAAATTAGAGATA 328326
Query 54809 GCTATTCTAGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATT 54868
|||||||||||||| | | | |||||||| ||||| || || | || ||
Sbjct 328327 GCTATTCTAGCGGCCAAAGTAGCATAATCAGGATGCACAGTCGTCATATACGCACAAGTT 328386
Query 54869 TCGGCTGTCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACC 54928
|| || | || | |||||||||| || || || || || | ||| | || || |
Sbjct 328387 TCAGCAGCCAAATTGTCCAATTCAACAGTAGTCACACCTTCATAGACACCAGAAATGATA 328446
Query 54929 TTCATAGCTATTTTAATAGGATCTATATGATCAGTGTTTAAGCCATAACATAATTTTCTA 54988
| | || |||| || ||| ||||| ||| || || ||||| ||||| |
Sbjct 328447 CGCTGGGTGATCTTAACAGCATCAATATGTGCAGGGTCTAGACCATAGCATAAACGTGAT 328506
Query 54989 ATACGAGATGTGATTTTATCAAACATGACATTTTCCtt 55026
||||| | || || || || ||| | |||| ||||||
Sbjct 328507 ATACGTGCAGTAATCTTGTCGAACCTAACATGTTCCTT 328544
>seq4
Length=1065440
Score = 251 bits (278), Expect = 8e-62
Identities = 415/594 (70%), Gaps = 10/594 (2%)
Strand=Plus/Plus
Query 24134 ACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAG 24193
|||||| |||||| |||| ||| || ||||| | || |||||||| |||||||| ||
Sbjct 811210 ACATGCAAAATCGGTATGTAAACCTTCATCTCTGCAGATCAATTCGTTAGAAAACGTTAG 811269
Query 24194 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAA 24253
|| |||||||| || ||| || | ||| || || | ||||| || || ||||||||
Sbjct 811270 ACCTGGCATTAGACCTTTCTTCTTCAACCAGAAGATAGCAGCAAAGGAACCTGAAAAGAA 811329
Query 24254 AATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAACCGG---CGCTGTCATG 24310
||| ||||| | || || || |||| | ||| ||| | | | | ||||| ||
Sbjct 811330 AATACCTTCAATGGCAGCGAAAGCAACCAATCTCTCTGCGAAGATAGATTCACTGTCCTG 811389
Query 24311 TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATT 24370
||||| | |||||| |||||||||| ||| | ||| || | || || |||||
Sbjct 811390 AATCCATCTGATAGCCCATTCGGCCTTCTCTTTAATCTGAGGAATGTTTTCAATCGCATT 811449
Query 24371 AAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACAT 24430
|| | | | |||| || ||| || | ||| |||||||| || || ||| |
Sbjct 811450 GAATAAGAAATCGCTTTCCTTTGGATCCTTGATATAAGTATCAATTAACAGGGAATAGGT 811509
Query 24431 TTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAAT 24490
|| || ||||||||||| || ||||| || || ||||||||| |||| || | |||
Sbjct 811510 CTCTGAGTGAATGTTTTCCATCATGATTTGGAAACCATAGAAACATTTAGCTTCTGGAAT 811569
Query 24491 CTGTACTTCTATAC--AAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCT 24548
|| |||||| || ||| || || ||||||| ||||| ||||| || ||| |||
Sbjct 811570 TTGCACTTCTGCACTGAAATTC--TCAACTAAATTCTCATTTACTATACCATCAGAGGCA 811627
Query 24549 GCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCG-TCTGGT--GTTAGTTTATTC 24605
||||| || ||||| ||| | || ||| || ||||| ||| | | | ||||||
Sbjct 811628 GCAAAGAAGGCCAAGACACGGGAGATGAAAAATCTTTCGTTCTCATTCATACGGTTATTC 811687
Query 24606 CAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCC 24665
||||||| ||||| || || | ||| | ||||| | ||||| || || ||||||||
Sbjct 811688 CAATCATGAATATCCTTCGACAGATCAATCTCTTCGGCCGTCCAGAACGAAGCCTCTGCT 811747
Query 24666 TTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAATCTA 24719
| |||||| | ||| || ||||| |||| ||||| || | ||||||||||
Sbjct 811748 CTCTTATACGCTTGCCAAATCTCATGGTATTTGATTGGGAATAGAACAAATCTA 811801
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593721184394880
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