Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F002214845.1_202017-07-
05] 56 sequences; 9,683,383 total letters
Query= NC_001962.1
Length=128413
Score E
Sequences producing significant alignments: (Bits) Value
seq2 105 5e-18
seq8 104 2e-17
seq6 98.7 8e-16
>seq2
Length=1385486
Score = 105 bits (116), Expect = 5e-18
Identities = 154/218 (71%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 25044 TTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCAGAGACGGTG 25103
||| |||| || ||||| || || ||||| || ||| ||| | | || || |
Sbjct 975626 TTCGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATT 975567
Query 25104 GCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTT 25163
| | || ||||| ||| ||| || || |||||| | || || ||||||||| |
Sbjct 975566 GACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTG 975507
Query 25164 ATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAATATTCAAAAG 25223
|||||||| || || ||||||||||| | |||| || |||| ||||| || ||||||
Sbjct 975506 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACTTTGTCCGACTACAACATCCAAAAG 975447
Query 25224 GAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261
||||| ||||| ||| |||| || |||| |||| ||
Sbjct 975446 GAATCCACTCTACACTTGGTTCTAAGATTGAGAGGTGG 975409
>seq8
Length=676247
Score = 104 bits (114), Expect = 2e-17
Identities = 161/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 25032 AAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCC 25091
|| |||||||| ||| |||| || ||||| || || || |||||| ||| ||| |
Sbjct 116048 AAGATGCAAATTTTCGTCAAGACTTTGACCGGTAAGACTATTACCTTGGAAGTCGAATCT 115989
Query 25092 GCAGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGAT 25151
| || || | | | || ||||| || || || || || ||| | || ||
Sbjct 115988 TCTGACACTATTGACAATGTCAAGTCTAAGATCCAAGACAAGGAGGGTATCCCACCTGAC 115929
Query 25152 CAACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTAC 25211
||||||||| | |||||||| || || |||||||||||| | |||| || | || |||
Sbjct 115928 CAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCTGACTAC 115869
Query 25212 AATATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261
|| || ||||||||||| ||| | ||| |||| || |||| |||| ||
Sbjct 115868 AACATCCAAAAGGAATCCACTTTGCACTTGGTCCTAAGATTGAGAGGTGG 115819
>seq6
Length=935435
Score = 98.7 bits (108), Expect = 8e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094
||||| || ||| |||| || || || || |||||||| ||| || || || |
Sbjct 585810 ATGCAGATCTTCGTCAAGACTTTAACTGGTAAAACCATCACCCTGGAGGTTGAGTCCTCT 585751
Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154
|| || | | | || ||||| || ||| |||||||||||| | || || |||
Sbjct 585750 GATACTATTGACAATGTCAAGAGCAAGATTCAAGATAAAGAAGGTATTCCACCTGACCAA 585691
Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214
|||||| | ||||| || || || ||| | |||||| | |||| | ||||||||||
Sbjct 585690 CAAAGATTGATCTTCGCAGGTAAGCAACTAGAAGATGGAAGAACTCTATCCGATTACAAC 585631
Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261
|| || |||||||||||| | || |||| || |||| || || ||
Sbjct 585630 ATCCAGAAGGAATCTACTTTGCATCTGGTTTTGAGATTGCGTGGTGG 585584
Score = 98.7 bits (108), Expect = 8e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094
||||| || ||| |||| || || || || |||||||| ||| || || || |
Sbjct 586038 ATGCAGATCTTCGTCAAGACTTTAACTGGTAAAACCATCACCCTGGAGGTTGAGTCCTCT 585979
Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154
|| || | | | || ||||| || ||| |||||||||||| | || || |||
Sbjct 585978 GATACTATTGACAATGTCAAGAGCAAGATTCAAGATAAAGAAGGTATTCCACCTGACCAA 585919
Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214
|||||| | ||||| || || || ||| | |||||| | |||| | ||||||||||
Sbjct 585918 CAAAGATTGATCTTCGCAGGTAAGCAACTAGAAGATGGAAGAACTCTATCCGATTACAAC 585859
Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261
|| || |||||||||||| | || |||| || |||| || || ||
Sbjct 585858 ATCCAGAAGGAATCTACTTTGCATCTGGTTTTGAGATTGCGTGGTGG 585812
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094
||||| || ||| |||| || || || || |||||||| ||| || || || |
Sbjct 586266 ATGCAGATCTTCGTCAAGACTTTAACTGGTAAAACCATCACCCTGGAGGTTGAGTCCTCT 586207
Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154
|| || | | | || ||||| || ||| |||||||||||| | || || |||
Sbjct 586206 GATACTATTGACAATGTCAAGAGCAAGATTCAAGATAAAGAAGGTATTCCACCTGACCAA 586147
Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214
|||||| | ||||| || || || ||| | |||||| | |||| | ||||||||||
Sbjct 586146 CAAAGATTGATCTTCGCAGGTAAGCAACTAGAAGATGGAAGAACTCTATCCGATTACAAC 586087
Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261
|| || |||||||||||| | || | || || |||| || || ||
Sbjct 586086 ATCCAGAAGGAATCTACTTTGCATCTAGTTTTGAGATTGCGTGGTGG 586040
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094
||||| || ||| |||| || || || || |||||||| ||| || || || |
Sbjct 586494 ATGCAGATCTTCGTCAAGACTTTAACTGGTAAAACCATCACCCTGGAGGTTGAGTCCTCT 586435
Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154
|| || | | | || ||||| || ||| |||||||||||| | || || |||
Sbjct 586434 GATACTATTGACAATGTCAAGAGCAAGATTCAAGATAAAGAAGGTATTCCACCTGACCAA 586375
Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214
|||||| | ||||| || || || ||| | |||||| | |||| | ||||||||||
Sbjct 586374 CAAAGATTGATCTTCGCAGGTAAGCAACTAGAAGATGGAAGAACTCTATCCGATTACAAC 586315
Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261
|| || |||||||||||| | || | || || |||| || || ||
Sbjct 586314 ATCCAGAAGGAATCTACTTTGCATCTAGTTTTGAGATTGCGTGGTGG 586268
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094
||||| || ||| |||| || || || || |||||||| ||| || || || |
Sbjct 586722 ATGCAGATCTTCGTCAAGACTTTAACTGGTAAAACCATCACCCTGGAGGTTGAGTCCTCT 586663
Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154
|| || | | | || ||||| || ||| |||||||||||| | || || |||
Sbjct 586662 GATACTATTGACAATGTCAAGAGCAAGATTCAAGATAAAGAAGGTATTCCACCTGACCAA 586603
Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214
|||||| | ||||| || || || ||| | |||||| | |||| | ||||||||||
Sbjct 586602 CAAAGATTGATCTTCGCAGGTAAGCAACTAGAAGATGGAAGAACTCTATCCGATTACAAC 586543
Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261
|| || |||||||||||| | || | || || |||| || || ||
Sbjct 586542 ATCCAGAAGGAATCTACTTTGCATCTAGTTTTGAGATTGCGTGGTGG 586496
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094
||||| || ||| |||| || || || || |||||||| ||| || || || |
Sbjct 586950 ATGCAGATCTTCGTCAAGACTTTAACTGGTAAAACCATCACCCTGGAGGTTGAGTCCTCT 586891
Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154
|| || | | | || ||||| || ||| |||||||||||| | || || |||
Sbjct 586890 GATACTATTGACAATGTCAAGAGCAAGATTCAAGATAAAGAAGGTATTCCACCTGACCAA 586831
Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214
|||||| | ||||| || || || ||| | |||||| | |||| | ||||||||||
Sbjct 586830 CAAAGATTGATCTTCGCAGGTAAGCAACTAGAAGATGGAAGAACTCTATCCGATTACAAC 586771
Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261
|| || |||||||||||| | || | || || |||| || || ||
Sbjct 586770 ATCCAGAAGGAATCTACTTTGCATCTAGTTTTGAGATTGCGTGGTGG 586724
Score = 89.7 bits (98), Expect = 4e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094
||||| || || |||| || || || || |||||||| ||| || || || |
Sbjct 587178 ATGCAGATTTTTGTCAAGACTTTAACTGGTAAAACCATCACCCTGGAGGTTGAGTCCTCT 587119
Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154
|| || | | | || ||||| || ||| |||||||||||| | || || |||
Sbjct 587118 GATACTATTGACAATGTCAAGAGCAAGATTCAAGATAAAGAAGGTATTCCACCTGACCAA 587059
Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214
|||||| | ||||| || || || ||| | |||||| | |||| | ||||||||||
Sbjct 587058 CAAAGATTGATCTTCGCAGGTAAGCAACTAGAAGATGGAAGAACTCTATCCGATTACAAC 586999
Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261
|| || |||||||||||| | || | || || |||| || || ||
Sbjct 586998 ATCCAGAAGGAATCTACTTTGCATCTAGTTTTGAGATTGCGTGGTGG 586952
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 410796519631184
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |