Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F002214845.1_202017-07- 05] 56 sequences; 9,683,383 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq4 196 4e-45 >seq4 Length=1065440 Score = 196 bits (216), Expect = 4e-45 Identities = 567/858 (66%), Gaps = 35/858 (4%) Strand=Plus/Plus Query 15959 ACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATTTTCCATAAAATCAAAA 16018 ||||||||||| || ||||| || || || | | || || || ||||| |||||||| Sbjct 810935 ACTCTCTTTTCGAAAAAATTGGTCTTACCAGCCAGCGAGATGTTCTCCATGAAATCAAAT 810994 Query 16019 GGATTTTT-----TGAACAATAGTATTTATCGCATCCCAATTCCAACAATAATCTATCCG 16073 || || | |||| ||| | || || || || | | || || |||||| | Sbjct 810995 GGGTTAGTCACGTTGAAAAATT-TCTTGTTC----CCGAAAGCGACCAGTAGTCTATCAG 811049 Query 16074 CCACAAATTCTATATACTGTTTCATTAAATCACAGTTCATTCCTATTAATTTAACAGGGA 16133 | || || || | ||||| ||||| | || |||||| || | ||| ||| || | Sbjct 811050 CGACGAACTCAACGTACTGGTTCATCAGGTCGGCGTTCATACCCAATAAAGAAACGGGTA 811109 Query 16134 TTGCTTCTGTTAAAAAAtttttttCTATATTAACCGCTTCAATGATTATATCTCTTACTA 16193 || || | || | | ||||| || | || |||||| | || || | || | | Sbjct 811110 GAGCATCGATGAAGTACCTCTTTTCGATCTCGACGGCTTCAGTAATAATCT---TTTCGA 811166 Query 16194 CACTATTTAACGGAG--GGTTTAAT----AAGTGTTTAAACATTATACAAGCAAAATCAC 16247 | || || ||| || ||| | || || ||| | || ||| |||||||| Sbjct 811167 TA--ATGGAA-GGATCTGGCTTATTCTTCAAATGAGCAAATAGTAGACATGCAAAATCGG 811223 Query 16248 AATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGACCTGGCATTAGTC 16307 ||| || ||||| || || | || || ||||| ||||| || |||||||||||||| | Sbjct 811224 TATGTAAACCTTCATCTCTGCAGATCAATTCGTTAGAAAACGTTAGACCTGGCATTAGAC 811283 Query 16308 CTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATATACCTTCAACTG 16367 || || || | ||| || ||||| ||||| ||||| |||||||| |||||||||| | Sbjct 811284 CTTTCTTCTTCAACCAGAAGATAGCAGCAAAGGAACCTGAAAAGAAAATACCTTCAATGG 811343 Query 16368 CGGCAAATGCAACCAATCGCTCACCGTACGTTCTAtttttactttc---tatccattttt 16424 | || || |||||||||| ||| || | || || ||| || |||||| | Sbjct 811344 CAGCGAAAGCAACCAATCTCTCTGCGAA---GATAGATTCACTGTCCTGAATCCATCTGA 811400 Query 16425 tagcccaatttgctttttgtttAA-CACAGTTCATGTTCTCTATTGCATTAAATAAATAA 16483 ||||||| | || || | ||||| | || ||||| || || ||||| ||||| || Sbjct 811401 TAGCCCATTCGGCCTTCTCTTTAATCTGAG-GAATGTTTTCAATCGCATTGAATAAGAAA 811459 Query 16484 tttttttCTTTGCTATCTAAAATATAAGTATCTATTAGTAAACTATACATTTCTGAATGA 16543 | |||| || ||| ||||||||||| |||| | ||| | ||||| ||| Sbjct 811460 TCGCTTTCCTTTGGATCCTTGATATAAGTATCAATTAACAGGGAATAGGTCTCTGAGTGA 811519 Query 16544 ATATTCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGATATTTGTACTTCA 16603 || || ||||| || || |||||||| || ||| ||||||| | ||||| ||||| Sbjct 811520 ATGTTTTCCATCATGATTTGGAAACCATAGAAACATTTAGCTTCTGGAATTTGCACTTCT 811579 Query 16604 G-AGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGCTGCAAAAAACGC 16662 | | | ||| | || |||| || || || ||||| ||||| || ||||| || || Sbjct 811580 GCACTGAAA-TTCTCAACTAAATTCTCATTTACTATACCATCAGAGGCAGCAAAGAAGGC 811638 Query 16663 AAGTATGTGTTTAATAAAAtttttttCGTTATC--TGA-AAGTTTTAACCAGTCAGAAAA 16719 | | | || ||| | ||||||| || | | | | || ||| ||| || Sbjct 811639 CAAGACACGGGAGATGAAAAATCTTTCGTTCTCATTCATACGGTTATTCCAATCATGAAT 811698 Query 16720 ATCTTTTGATAAATCGACCTCTTCTACAGTCCAAAAAGAAGCAACAGCCTTTTTATACAT 16779 ||| || || | ||| | |||||| | ||||| || ||||| | || | |||||| Sbjct 811699 ATCCTTCGACAGATCAATCTCTTCGGCCGTCCAGAACGAAGCCTCTGCTCTCTTATACGC 811758 Query 16780 TTTCCATATGTCTTCGTA 16797 || ||| || || | ||| Sbjct 811759 TTGCCAAATCTCATGGTA 811776 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462511676241600