Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F002214845.1_202017-07- 05] 56 sequences; 9,683,383 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq4 206 2e-48 seq2 109 5e-19 seq1 100 3e-16 seq8 96.9 3e-15 >seq4 Length=1065440 Score = 206 bits (228), Expect = 2e-48 Identities = 586/886 (66%), Gaps = 37/886 (4%) Strand=Plus/Minus Query 57534 CGTAGATTTGTCATGTTTCCGATTGAATATCCAGACATTTGGAACATGTACAAAAAGGCA 57593 ||||||||||| | || || || |||| | || |||||| | ||| || | ||| Sbjct 811803 CGTAGATTTGTTCTATTCCCAATCAAATACCATGAGATTTGGCAAGCGTATAAGAGAGCA 811744 Query 57594 GAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTGAGCGATTGGGAT 57653 || || ||||| ||||| | |||||| | || ||||| |||||| | |||||| || Sbjct 811743 GAGGCTTCGTTCTGGACGGCCGAAGAGATTGATCTGTCGAAGGATATTCATGATTGGAAT 811684 Query 57654 TCCCTCAAAGAATCTGAGAGAAATTTTATTAAACAC----GTGTTGGCGTTTTTCGCCGC 57709 || | |||| || |||| || || | | | || ||||| || || || || Sbjct 811683 AACC-GTATGAATGAGAACGAAAGATTTTTCATCTCCCGTGTCTTGGCCTTCTTTGCTGC 811625 Query 57710 ATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGATTTTCA--CAAGAAGTGCAAGTG 57767 || |||||||| || || |||||||| || | ||| ||||| |||||||||| | Sbjct 811624 CTCTGATGGTATAGTAAATGAGAATTTAGTTG--AGAATTTCAGTGCAGAAGTGCAAATT 811567 Query 57768 ACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATTGAAAACGTGCATTCAGAAATG 57827 | || || | ||| || || || || ||| | || |||||| | || ||||| | Sbjct 811566 CCAGAAGCTAAATGTTTCTATGGTTTCCAAATCATGATGGAAAACATTCACTCAGAGACC 811507 Query 57828 TATTCGCTACTCATCGATACGTACGTGAAGGA--CAACGACGAGAAACG-TAGACTGTTC 57884 ||||| || | || ||||| || | ||||| ||| | || || || | | ||| Sbjct 811506 TATTCCCTGTTAATTGATACTTATATCAAGGATCCAA--AGGA-AAGCGATTTCTTATTC 811450 Query 57885 AACGCGATCGAAACAATGCCCGCGATCGCCAAGAAGGCAGAGTGGTCAATCAAATGGATA 57944 || ||||| |||| || || ||| ||||||| || ||| | |||| |||||| Sbjct 811449 AATGCGATTGAAAACATTCCTCAGATTAAAGAGAAGGCCGAATGGGCTATCAGATGGATT 811390 Query 57945 AAAAGCGCCACGG---CCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGT 58001 | | || | | | ||||| ||||| | | || ||||| ||| | |||||| Sbjct 811389 CA---GGACAGTGAATCTATCTTCGCAGAGAGATTGGTTGCTTTCGCTGCCATTGAAGGT 811333 Query 58002 ATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCC 58061 || |||||||| || |||||| || || || ||| ||||||| || || ||||| Sbjct 811332 ATTTTCTTTTCAGGTTCCTTTGCTGCTATCTTCTGGTTGAAGAAGAAAGGTCTAATGCCA 811273 Query 58062 GGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCG 58121 || || |||||| ||||| ||||| | | || || ||| | ||||| |||||||| Sbjct 811272 GGTCTAACGTTTTCTAACGAATTGATCTGCAGAGATGAAGGTTTACATACCGATTTTGCA 811213 Query 58122 TGCCTAATGTACTCTCACATTGTCAATAAACC-GACGCGGGATCGCATCTTGG---ACAT 58177 || ||| | | |||| | ||||| || || | | ||| | | | || Sbjct 811212 TGTCTACTATTTGCTCATTTGAAGAATAAGCCAGATCC----TTCCATTATCGAAAAGAT 811157 Query 58178 TATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCACCGAAGCCCTACCGGTGGCCAT 58237 ||| || || || |||| ||||||||| || ||| ||| || ||||| || | | Sbjct 811156 TATTACTGAAGCCGTCGAGATCGAAAAGAGGTACTTCATCGATGCTCTACCCGTTTCTTT 811097 Query 58238 GCTCGGTATGAACAATGATTTGATGTCAAAGTACATTGAGTTTGTTGCCGACAGACTTTT 58297 | ||||||||| || ||||| ||||| ||||||| || || || ||||| | Sbjct 811096 ATTGGGTATGAACGCCGACCTGATGAACCAGTACGTTGAGTTCGTCGCTGATAGACTACT 811037 Query 58298 GCTCGAACTGATTGGAGAGCGTCA----TTACAACACGAAAAATCCGTTTGATTTTATGA 58353 | ||| || || | || | | || |||| || || || |||||||| ||| Sbjct 811036 GGTCG--CT--TTCGGGAACAAGAAATTTTTCAACGTGACTAACCCATTTGATTTCATGG 810981 Query 58354 ATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTCGaaaaaaaaGT 58399 | |||||||| | || ||||| || ||||||||||| | ||| Sbjct 810980 AGAACATCTCGCTGGCTGGTAAGACCAATTTTTTCGAAAAGAGAGT 810935 >seq2 Length=1385486 Score = 109 bits (120), Expect = 5e-19 Identities = 159/222 (72%), Gaps = 2/222 (1%) Strand=Plus/Minus Query 31201 TTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGT 31260 |||||| |||||| |||| || || || ||||| | || |||||| | || |||| | | Sbjct 975627 TTTCGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTAT 975568 Query 31261 CGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTC 31319 || | ||||| || ||| | | |||||||||| | || || ||||| || | Sbjct 975567 TGACAATGTCAAGTCAAAGATTCAAG-ACAAGGAAGGTATCCCACCTGACCAACAAAGAT 975509 Query 31320 TAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAA 31379 | || || ||||| || || ||||||||| || ||| || ||| || ||||| |||| Sbjct 975508 TGATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACTTTGTCCGACTACAACATCCAAA 975449 Query 31380 AAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 | ||||| ||||| || |||| || ||| |||| || |||| Sbjct 975448 AGGAATCCACTCTACACTTGGTTCTAAGATTGAGAGGTGGTA 975407 >seq1 Length=1424806 Score = 100 bits (110), Expect = 3e-16 Identities = 157/225 (70%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 23342 TCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGC 23401 || || || ||||| || || || |||||||| || || | ||||| || | ||| | | Sbjct 989180 TCGACCCGCCTCATGAACAGGTCAGGTATCCACAGCGCAAAAAACAGATCTCTGGCTCTC 989239 Query 23402 ACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCAC 23461 | || ||||| ||| ||||||| | | | ||| || | | |||||||||||| Sbjct 989240 ATTTCTTCTTTACCGTGGTTCTTTCGAAGCTGTAGAAAATCAAGGATGTCCGCATGCCAT 989299 Query 23462 GGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGG 23521 |||||||| || | | | | || || || ||||| ||||| |||||||| || || | Sbjct 989300 GGCTCGAGATATATGCAATAAGCTCCGGGCCTCTTGTTGCCACCCTGATCTACATATCTT 989359 Query 23522 GCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGAC 23566 || ||||| ||| | || | ||||| || || | ||| | ||| Sbjct 989360 GCAGTGTTATTGAAAACGCGAAGCATTGGAACCAAGCCGCTCGAC 989404 >seq8 Length=676247 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249 || |||||||||||||| |||||| |||| || || || || ||| | || || ||| | Sbjct 116048 AAGATGCAAATTTTCGTCAAGACTTTGACCGGTAAGACTATTACCTTGGAAGTCGAATCT 115989 Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309 || |||| | | || | ||||| | || |||||||| || | || || ||| Sbjct 115988 TCTGACACTATTGACAATGTCAAGTCTAAGATCCAAGACAAGGAGGGTATCCCACCTGAC 115929 Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369 || || | | || || ||||| || || |||||||| || ||| || || || Sbjct 115928 CAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCTGACTAC 115869 Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420 ||||| ||||| ||||| ||| | || |||| || ||| |||| || ||| Sbjct 115868 AACATCCAAAAGGAATCCACTTTGCACTTGGTCCTAAGATTGAGAGGTGGT 115818 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445766087963520