Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F002214845.1_202017-07-
05] 56 sequences; 9,683,383 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq4 206 2e-48
seq2 109 5e-19
seq1 100 3e-16
seq8 96.9 3e-15
>seq4
Length=1065440
Score = 206 bits (228), Expect = 2e-48
Identities = 586/886 (66%), Gaps = 37/886 (4%)
Strand=Plus/Minus
Query 57534 CGTAGATTTGTCATGTTTCCGATTGAATATCCAGACATTTGGAACATGTACAAAAAGGCA 57593
||||||||||| | || || || |||| | || |||||| | ||| || | |||
Sbjct 811803 CGTAGATTTGTTCTATTCCCAATCAAATACCATGAGATTTGGCAAGCGTATAAGAGAGCA 811744
Query 57594 GAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTGAGCGATTGGGAT 57653
|| || ||||| ||||| | |||||| | || ||||| |||||| | |||||| ||
Sbjct 811743 GAGGCTTCGTTCTGGACGGCCGAAGAGATTGATCTGTCGAAGGATATTCATGATTGGAAT 811684
Query 57654 TCCCTCAAAGAATCTGAGAGAAATTTTATTAAACAC----GTGTTGGCGTTTTTCGCCGC 57709
|| | |||| || |||| || || | | | || ||||| || || || ||
Sbjct 811683 AACC-GTATGAATGAGAACGAAAGATTTTTCATCTCCCGTGTCTTGGCCTTCTTTGCTGC 811625
Query 57710 ATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGATTTTCA--CAAGAAGTGCAAGTG 57767
|| |||||||| || || |||||||| || | ||| ||||| |||||||||| |
Sbjct 811624 CTCTGATGGTATAGTAAATGAGAATTTAGTTG--AGAATTTCAGTGCAGAAGTGCAAATT 811567
Query 57768 ACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATTGAAAACGTGCATTCAGAAATG 57827
| || || | ||| || || || || ||| | || |||||| | || ||||| |
Sbjct 811566 CCAGAAGCTAAATGTTTCTATGGTTTCCAAATCATGATGGAAAACATTCACTCAGAGACC 811507
Query 57828 TATTCGCTACTCATCGATACGTACGTGAAGGA--CAACGACGAGAAACG-TAGACTGTTC 57884
||||| || | || ||||| || | ||||| ||| | || || || | | |||
Sbjct 811506 TATTCCCTGTTAATTGATACTTATATCAAGGATCCAA--AGGA-AAGCGATTTCTTATTC 811450
Query 57885 AACGCGATCGAAACAATGCCCGCGATCGCCAAGAAGGCAGAGTGGTCAATCAAATGGATA 57944
|| ||||| |||| || || ||| ||||||| || ||| | |||| ||||||
Sbjct 811449 AATGCGATTGAAAACATTCCTCAGATTAAAGAGAAGGCCGAATGGGCTATCAGATGGATT 811390
Query 57945 AAAAGCGCCACGG---CCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGT 58001
| | || | | | ||||| ||||| | | || ||||| ||| | ||||||
Sbjct 811389 CA---GGACAGTGAATCTATCTTCGCAGAGAGATTGGTTGCTTTCGCTGCCATTGAAGGT 811333
Query 58002 ATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCC 58061
|| |||||||| || |||||| || || || ||| ||||||| || || |||||
Sbjct 811332 ATTTTCTTTTCAGGTTCCTTTGCTGCTATCTTCTGGTTGAAGAAGAAAGGTCTAATGCCA 811273
Query 58062 GGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCG 58121
|| || |||||| ||||| ||||| | | || || ||| | ||||| ||||||||
Sbjct 811272 GGTCTAACGTTTTCTAACGAATTGATCTGCAGAGATGAAGGTTTACATACCGATTTTGCA 811213
Query 58122 TGCCTAATGTACTCTCACATTGTCAATAAACC-GACGCGGGATCGCATCTTGG---ACAT 58177
|| ||| | | |||| | ||||| || || | | ||| | | | ||
Sbjct 811212 TGTCTACTATTTGCTCATTTGAAGAATAAGCCAGATCC----TTCCATTATCGAAAAGAT 811157
Query 58178 TATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCACCGAAGCCCTACCGGTGGCCAT 58237
||| || || || |||| ||||||||| || ||| ||| || ||||| || | |
Sbjct 811156 TATTACTGAAGCCGTCGAGATCGAAAAGAGGTACTTCATCGATGCTCTACCCGTTTCTTT 811097
Query 58238 GCTCGGTATGAACAATGATTTGATGTCAAAGTACATTGAGTTTGTTGCCGACAGACTTTT 58297
| ||||||||| || ||||| ||||| ||||||| || || || ||||| |
Sbjct 811096 ATTGGGTATGAACGCCGACCTGATGAACCAGTACGTTGAGTTCGTCGCTGATAGACTACT 811037
Query 58298 GCTCGAACTGATTGGAGAGCGTCA----TTACAACACGAAAAATCCGTTTGATTTTATGA 58353
| ||| || || | || | | || |||| || || || |||||||| |||
Sbjct 811036 GGTCG--CT--TTCGGGAACAAGAAATTTTTCAACGTGACTAACCCATTTGATTTCATGG 810981
Query 58354 ATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTCGaaaaaaaaGT 58399
| |||||||| | || ||||| || ||||||||||| | |||
Sbjct 810980 AGAACATCTCGCTGGCTGGTAAGACCAATTTTTTCGAAAAGAGAGT 810935
>seq2
Length=1385486
Score = 109 bits (120), Expect = 5e-19
Identities = 159/222 (72%), Gaps = 2/222 (1%)
Strand=Plus/Minus
Query 31201 TTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGT 31260
|||||| |||||| |||| || || || ||||| | || |||||| | || |||| | |
Sbjct 975627 TTTCGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTAT 975568
Query 31261 CGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTC 31319
|| | ||||| || ||| | | |||||||||| | || || ||||| || |
Sbjct 975567 TGACAATGTCAAGTCAAAGATTCAAG-ACAAGGAAGGTATCCCACCTGACCAACAAAGAT 975509
Query 31320 TAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAA 31379
| || || ||||| || || ||||||||| || ||| || ||| || ||||| ||||
Sbjct 975508 TGATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACTTTGTCCGACTACAACATCCAAA 975449
Query 31380 AAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
| ||||| ||||| || |||| || ||| |||| || ||||
Sbjct 975448 AGGAATCCACTCTACACTTGGTTCTAAGATTGAGAGGTGGTA 975407
>seq1
Length=1424806
Score = 100 bits (110), Expect = 3e-16
Identities = 157/225 (70%), Gaps = 0/225 (0%)
Strand=Plus/Plus
Query 23342 TCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGC 23401
|| || || ||||| || || || |||||||| || || | ||||| || | ||| | |
Sbjct 989180 TCGACCCGCCTCATGAACAGGTCAGGTATCCACAGCGCAAAAAACAGATCTCTGGCTCTC 989239
Query 23402 ACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCAC 23461
| || ||||| ||| ||||||| | | | ||| || | | ||||||||||||
Sbjct 989240 ATTTCTTCTTTACCGTGGTTCTTTCGAAGCTGTAGAAAATCAAGGATGTCCGCATGCCAT 989299
Query 23462 GGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGG 23521
|||||||| || | | | | || || || ||||| ||||| |||||||| || || |
Sbjct 989300 GGCTCGAGATATATGCAATAAGCTCCGGGCCTCTTGTTGCCACCCTGATCTACATATCTT 989359
Query 23522 GCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGAC 23566
|| ||||| ||| | || | ||||| || || | ||| | |||
Sbjct 989360 GCAGTGTTATTGAAAACGCGAAGCATTGGAACCAAGCCGCTCGAC 989404
>seq8
Length=676247
Score = 96.9 bits (106), Expect = 3e-15
Identities = 160/231 (69%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249
|| |||||||||||||| |||||| |||| || || || || ||| | || || ||| |
Sbjct 116048 AAGATGCAAATTTTCGTCAAGACTTTGACCGGTAAGACTATTACCTTGGAAGTCGAATCT 115989
Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309
|| |||| | | || | ||||| | || |||||||| || | || || |||
Sbjct 115988 TCTGACACTATTGACAATGTCAAGTCTAAGATCCAAGACAAGGAGGGTATCCCACCTGAC 115929
Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369
|| || | | || || ||||| || || |||||||| || ||| || || ||
Sbjct 115928 CAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCTGACTAC 115869
Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420
||||| ||||| ||||| ||| | || |||| || ||| |||| || |||
Sbjct 115868 AACATCCAAAAGGAATCCACTTTGCACTTGGTCCTAAGATTGAGAGGTGGT 115818
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445766087963520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |