Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F002214845.1_202017-07- 05] 56 sequences; 9,683,383 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq4 167 2e-36 seq7 150 2e-31 >seq4 Length=1065440 Score = 167 bits (184), Expect = 2e-36 Identities = 412/614 (67%), Gaps = 16/614 (3%) Strand=Plus/Plus Query 11612 AAATGTTTAAACATTAAACACGCAAAATCACAATGTAAACCTTCGTCTCTACTTATTAGT 11671 ||||| ||| | || ||| |||||||| |||||||||||| ||||| | || | | Sbjct 811193 AAATGAGCAAATAGTAGACATGCAAAATCGGTATGTAAACCTTCATCTCTGCAGATCAAT 811252 Query 11672 TCATTAGAAAATGTTAATCCGGGCATCAATCCTCGtttttttATCCAAAATATAGCAGCA 11731 || |||||||| |||| || ||||| | ||| || || | ||| || ||||||||| Sbjct 811253 TCGTTAGAAAACGTTAGACCTGGCATTAGACCTTTCTTCTTCAACCAGAAGATAGCAGCA 811312 Query 11732 AATGAACCAGAAAAGAATATTCCCTCCACAGCTGCAAATGCTACTACTCTTTCTCC--AT 11789 || ||||| |||||||| || || || | || || || || || | ||| ||| | | Sbjct 811313 AAGGAACCTGAAAAGAAAATACCTTCAATGGCAGCGAAAGCAACCAATCTCTCTGCGAAG 811372 Query 11790 ATACCTTGT-TG-CTAGATATCCATTTTCTGGCCCAATCAGCTTTCTTTTTTACGCATTC 11847 ||| || || | || |||||| | | ||||| || || |||| ||| | Sbjct 811373 ATAGATTCACTGTCCTGA-ATCCATCTGATAGCCCATTCGGCCTTCTCTTTAATCTGAGG 811431 Query 11848 CATTGTTTCTATAGCGTTAAATAAATGCATTT--TTTCTATATTATCTCTTACATATGTA 11905 || |||| || || || ||||| | | | |||| | ||| | | ||| ||| Sbjct 811432 AATGTTTTCAATCGCATTGAATAA--GAAATCGCTTTCCTTTGGATCCTTGATATAAGTA 811489 Query 11906 TCTATTAATAAACTATACATTTCTGAATGAATATTTTCCATAGCTATTTGAAATCCATAG 11965 || ||||| | ||| | ||||| ||||| |||||||| ||||| || |||||| Sbjct 811490 TCAATTAACAGGGAATAGGTCTCTGAGTGAATGTTTTCCATCATGATTTGGAAACCATAG 811549 Query 11966 AAACATCGTGCCTCTGAACACTGTACATCCACA-TAAAATCTTTCCGCTAAATTCTCATT 12024 |||||| || |||| | || || || || | |||| | || ||||||||||||| Sbjct 811550 AAACATTTAGCTTCTGGAATTTGCACTTCTGCACTGAAAT-TCTCAACTAAATTCTCATT 811608 Query 12025 TACAATACCATCACTAGATGCAAAAAATGCTAGTATATGTTTTATAAAGTATTTTTCGTC 12084 ||| ||||||||| | ||||| || || | | | | || || || |||||| Sbjct 811609 TACTATACCATCAGAGGCAGCAAAGAAGGCCAAGACACGGGAGATGAAAAATCTTTCGT- 811667 Query 12085 TTTAGTTAAT----TTATCCCAATCATCTAAATCTTTTGATAAATCTACTTCTTCAACGG 12140 | | || || |||| |||||||| | ||| || || | ||| | ||||| | | Sbjct 811668 TCTCATTCATACGGTTATTCCAATCATGAATATCCTTCGACAGATCAATCTCTTCGGCCG 811727 Query 12141 TCCAAAAACTTGCCACTGATTGTTTATACATTTTCCAGATATCATGATACTTAATAGGGA 12200 |||| || ||| ||| | |||||| || ||| || ||||| || || || |||| Sbjct 811728 TCCAGAACGAAGCCTCTGCTCTCTTATACGCTTGCCAAATCTCATGGTATTTGATTGGGA 811787 Query 12201 AAATAACGAACCTA 12214 | | ||| || ||| Sbjct 811788 ATAGAACAAATCTA 811801 >seq7 Length=810710 Score = 150 bits (166), Expect = 2e-31 Identities = 401/611 (66%), Gaps = 4/611 (1%) Strand=Plus/Plus Query 37941 AAAATCATTCCCCCATACATCGCATAATCCTGGACATTCGCATGGACACATTAGAGACCA 38000 ||| |||| || | ||||| | || |||||| ||| | |||| | | | || ||| Sbjct 327471 AAATTCATCACCATAAACATCAGACAAACCTGGAGCTTCACTTGGAGAGAACAAAGTCCA 327530 Query 38001 TTCTTCATCTTTTTCTACGCGTTCCATAAATAAATCAGGTACCCATAATGCAGTAAATAA 38060 ||| ||| | || || |||| ||| || ||||| || | ||| | || | || || Sbjct 327531 TTCACCATTCTCTTGAACACGTTTCATGAACAAATCTGGAATCCAGAGGGCTGGGAACAA 327590 Query 38061 ATCTTTGGTTCTATATTCTTCGTTCCCTACATTCTTTCTTAAGCTTAGAAAATCGAATAT 38120 |||| | | | | ||||| || || ||||| | | || ||||| || || Sbjct 327591 ATCTCTTGCACGAATCTCTTCCTTACCGTGGTTCTTCCGGATATCTATGAAATCAAAGAT 327650 Query 38121 ATCAGCGTGCCATGGTTCTA--TATAAATCGACATTGCTCCTGGTCTTTTATCACCTCCC 38178 || |||||||||||||| | || ||| ||| | || ||||| ||||| | ||| || Sbjct 327651 GTCTGCGTGCCATGGTTCCAAGTACAAAGCGAAA--GCACCTGGCCTTTTGTTACCACCT 327708 Query 38179 TGATTAATATATCTAACTGTGTTATTATATATTCTTAACATAGGTACTATACCATTAGAT 38238 |||| | ||| | | | ||||| || | | | || ||| || | | || || || Sbjct 327709 TGATCCACATAACGAGCAGTGTTGTTGAAGACACGTACCATGGGGATCAACCCGTTCGAA 327768 Query 38239 TTGCCGTTTATACCGGATATATAAGTACCCTTAGCTCGTATATTACTTATCGACAATCCT 38298 | ||||| |||| | ||||| | |||| ||| || || || ||| ||| || Sbjct 327769 GTACCGTTAGTACCTGCAATATATGAACCCGTAGAACGAATGTTGTGTATGTGCAAACCA 327828 Query 38299 ATTCCACCTGCATGTTTTGATATTAAAGCGCATTGTTTTAACGTATCAAATATACCTTCT 38358 || ||||| || || || || | ||| |||| || || ||||| | ||||| || Sbjct 327829 ATACCACCAGCGGTCTTAGAAATCATAGCACATTCCTTCAAAGTATCGTAAATACCCTCG 327888 Query 38359 ATACTGTCATCCTTTATTGGTAGTATAAAACAACTAGACATTTGAGGCAATGGAGTTCCG 38418 || ||||||||| || | | || ||||| |||||| ||||| |||||| || Sbjct 327889 ATGGAGTCATCCTTCATGGCGATTAGGAAACATGAAGACATCTGAGGGCGTGGAGTACCA 327948 Query 38419 GCGTTAAATAATGTAGGAGATGCATGTATGAACCATTTTTCCGACAAATAATTATATGTT 38478 || || || | || ||||| ||||| ||||| || | |||| |||||| || Sbjct 327949 GCATTGAAAAGAGTTGGAGAAGCATGAATGAAGTATCTCAAGGACATCAGATTATAAGTC 328008 Query 38479 TCTATTACATCATCTATATCACCGCCGTGAATACCTAGAGATACCCTCATTAGCATATGT 38538 || || || || || || | || |||||||| | || || ||||| | ||||||| Sbjct 328009 TCAATAGCAGACTCGATGTCGTCACCATGAATACCAACAGCAACTCTCATAATCATATGT 328068 Query 38539 TGTGGTCTTTC 38549 || || | ||| Sbjct 328069 TGAGGACGTTC 328079 Score = 120 bits (132), Expect = 3e-22 Identities = 499/782 (64%), Gaps = 9/782 (1%) Strand=Plus/Plus Query 36790 TCAACTGTGAATTTTATAGGATTTGATGCCGATTTTGTTCTCATATAATACATTCCAGTT 36849 |||| ||||||| |||| | || || | || ||| |||| || ||||| ||||| Sbjct 326299 TCAATGGTGAATTGAATAGCAGCAGAAGCGGCTTGTGTCCTCAGGTAGTACATACCAGTC 326358 Query 36850 TTTAGCCCCAATCTCCATCCGTAAAAATGCATACTGGTCAGTTTTGCGTATGTAGGATTA 36909 || | ||| |||| ||||| ||||||||||| |||| ||| | || ||| | Sbjct 326359 TTCAAACCCTTCTTCCAACCGTAGAAATGCATACTAGTCAATTTACCCATAGTTGGAGCA 326418 Query 36910 TCTATATATATTGTCATTGATTGACTTTGATCTATAAACGCACCTCTGTCGGCTGCCATT 36969 || | || ||| |||||| ||||| || | || | | || |||||||| Sbjct 326419 CGGATGTGAATGTTCAATGATTGGGACTGATCGATGTAAACAGCACGATCAGCTGCCATC 326478 Query 36970 TCTAAAATACATTTTTGAGATATCTCCCAAACCGTTTTATATATTTGTTTTATATTATCT 37029 || | ||| ||||||||| || |||||||| || || || | | |||| | | Sbjct 326479 TCGATGATAGTTTTTTGAGAGATTTCCCAAACAGTCTTGTACAAATCCTTTAGTTCTTGA 326538 Query 37030 GGTAAATC---TAAATGTTGAATAGAACCATTATGTAACACAATTGTATT-CTTTATGTC 37085 || | || || || ||| || || ||||||| | || || || ||| || Sbjct 326539 GGAATATTCGGTAGATTTTGGATGGAGCCATTATCAGTGATGAT-GTGTTGCTTCATACT 326597 Query 37086 ATTATTCCACATATTTCTACTT--ATTAGTTCTCTCAATAGGTGTGGATTTACAACCTGA 37143 || || ||| ||| ||| | | | || | | | || || || |||| || Sbjct 326598 ATCATCCCAGATAC--CTAGGTCGACCAAATCACGTAGCAAGTAAGGGTTGACAATTTGG 326655 Query 37144 AAATCTCCAGATAATACTCTTCTTGTATATATATTGCTAGTATATGGTTCAATGGACTCA 37203 || || || ||||| || | | | || |||||| ||| ||||| || | |||| Sbjct 326656 AATTCACCGGATAACACACGACGAGAGTACATATTGGAAGTGTATGGCTCGAAACACTCG 326715 Query 37204 TTATTACTTAATATTTGAGATGTAGATGCAGTAGGCATTGGTGCTATTAGAAGGCTATTT 37263 || | || || || || || || || ||||| |||||||| || | ||| | ||| Sbjct 326716 TTGTAACCTAGAATCTGGGAAGTCGACGCAGTTGGCATTGGGGCCAATAGCAAAGAGTTT 326775 Query 37264 CTCAATCCATGTGTATTAATTCTCTTTTTTAGTTCATTCCAATCCCATAAATCTGTTGGG 37323 || | |||| | || || || || || | | ||||||||||| ||| | ||| Sbjct 326776 CTAACACCATATTCCTTGATGCTTTTCTTCAAAGTGTCCCAATCCCATAGATCCGATGGT 326835 Query 37324 TTCTTTAACCACATATCATATTGTAGAATACCTTTACTCGCTGGAGAATCGTTATATGTC 37383 || | ||||| ||| || || | |||||||| | ||||||| | | ||| || Sbjct 326836 TTGGTGTTCCACAGATCGTACTGCAAAATACCTTGAGAGATTGGAGAACCTTCATAAGTG 326895 Query 37384 TCATAAGGTCCGTAAATTTTAGCTAGTTCGCAACTAGATTCTAGTGCGGCATAATATATT 37443 |||||||| | | || || | || || | ||| | | || | || || Sbjct 326896 GAGTAAGGTCCATCCTTCTTCGCCAACTCACAGGAGGCTTCCAAAGAAGCGTGGTAGATA 326955 Query 37444 GTTTCGAAAATTTGTATATTTAATATTTTTGCTTCTTCGCTATCGAATGCATAGCCCAAT 37503 |||||||| ||||| || |||| || ||||||| || |||| | | ||| Sbjct 326956 GTTTCGAAGATTTGGATGTTTAGATCCTTGGCTTCTTGAGACTCAAATGGAACACGCAAC 327015 Query 37504 AATATAAACACATCAGCCAAACCCTGAACACCGATACCTATGGGTCTATGTTTCTTATTA 37563 | |||||||| ||||||||||| | ||||| | | | || ||||| | | || ||||| Sbjct 327016 ATCATAAACACGTCAGCCAAACCATTGACACCTAGAGCCATAGGTCTGTTTCTCATATTA 327075 Query 37564 GA 37565 || Sbjct 327076 GA 327077 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468524472032640