Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F002214845.1_202017-07-
05] 56 sequences; 9,683,383 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq7 392 5e-104
seq4 269 4e-67
>seq7
Length=810710
Score = 392 bits (434), Expect = 5e-104
Identities = 1454/2261 (64%), Gaps = 43/2261 (2%)
Strand=Plus/Plus
Query 78708 CTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCC 78767
|||||| | ||||||||||| | ||| || |||| || || | || |||||||| ||
Sbjct 326295 CTTGTCAATGGTGAATTGAATAGCAGCAGAAGCGGCTTGTGTCCTCAGGTAGTACATACC 326354
Query 78768 CGTTTTTAGACCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCGG 78827
|| || | ||| |||| ||||||||||||||||| || | ||| | | ||
Sbjct 326355 AGTCTTCAAACCCTTCTTCCAACCGTAGAAATGCATACTAGTCAATTTACCCATAGTTGG 326414
Query 78828 ATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGC 78887
| | || || || |||| ||||| ||||||||| | | | | || || ||
Sbjct 326415 AGCACGGATGTGAATGTTCAATGATTGGGACTGATCGATGTAAACAGCACGATCAGCTGC 326474
Query 78888 CATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATAT 78946
||| | ||||| || ||||| | |||||||||| ||| || || || || ||| | |
Sbjct 326475 CATCTCGATGATAGTTTTTTGAGAGATTTCCCAAACAGTCTTGTACAAATCCTTTAGT-T 326533
Query 78947 CTTCTGGAAGGTTTGT---ATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGA 79003
||| |||| || | ||| || ||||| ||| ||| | || || | ||| |
Sbjct 326534 CTTGAGGAATATTCGGTAGATTTTGGATGGAGCCATTATCAGTGATGATGTGTTGCTTCA 326593
Query 79004 TCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTT 79063
| |||| ||| | | ||| ||| | | || | | || || || | ||
Sbjct 326594 TACTATCATCCCAGATACCTAGGTCGACCAAATCACGTAGCAAGTAAGGGTTGACAATTT 326653
Query 79064 GAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGATT 79123
| ||||| || || || || | |||| ||| ||||| || ||||| || | | |
Sbjct 326654 GGAATTCACCGGATAACACACGACGAGAGTACATATTGGAAGTGTATGGCTCGAAACACT 326713
Query 79124 CATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTAT 79183
| || | || | ||| || | ||| || || |||||||| || |||| | ||| |
Sbjct 326714 CGTTGTAACCTAGAATCTGGGAAGTCGACGCAGTTGGCATTGGGGCCAATAGCAAAGAGT 326773
Query 79184 TTCTAAGACCGTATGATCTGATTTTATCTTTTAGAGATTCCCAATCCCAAAGATCAGACG 79243
|||||| ||| ||| |||| | | || | || ||||||||||| ||||| || |
Sbjct 326774 TTCTAACACCATATTCCTTGATGCTTTTCTTCAAAGTGTCCCAATCCCATAGATCCGATG 326833
Query 79244 GGACAACATTCCAAAGATCATATTGTAGAATACCGTTACT-AGCGTATGATCCTGTGTAT 79302
| ||||| ||||| || || | |||||| | | | | | || ||| ||
Sbjct 326834 GTTTGGTGTTCCACAGATCGTACTGCAAAATACCTTGAGAGATTGGA-GAACCTTCATAA 326892
Query 79303 GTTTCATAAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCCGTAATAA 79362
|| |||||||| ||||| | || || ||||| || || || | ||| ||
Sbjct 326893 GTGGAGTAAGGTCCATCCTTCTTCGCCAACTCACAGGAGGCTTCCAAAGAAGCGTGGTAG 326952
Query 79363 ATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATCAAATGGATAATTT 79422
|| |||||||| || | | || ||||| | |||||| | ||||||||| |
Sbjct 326953 ATAGTTTCGAAGATTTGGATGTTTAGATCCTTGGCTTCTTGAGACTCAAATGGAACACGC 327012
Query 79423 AAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTA 79482
|| | |||||| |||| || || || | ||||| | | | |||||||| | |||| ||
Sbjct 327013 AACATCATAAACACGTCAGCCAAACCATTGACACCTAGAGCCATAGGTCTGTTTCTCATA 327072
Query 79483 TTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTC 79542
||||| || |||||| |||| || || || || ||| || | || || | ||
Sbjct 327073 TTAGAGTTTCTAGCTTCAGGAACTGGGTAGTAGTTTCGATCGATGACCTTGTTCAAGTTA 327132
Query 79543 CTGACT-ATTACTTTGACCACATCCTTTAGTTTGAGAAAATCAAATC-----GTC----C 79592
| || | || || ||| | | | | | ||| ||||||| | | ||| |
Sbjct 327133 C-GAGTGATAACCTTGGCAATTTTATGCAACTTGGCAAAATCATACCACTGGGTCTTACC 327191
Query 79593 ATCTATTACAAACATG--TTCA--------ACGCGACAGATGCCAGATTACAAACGGCTA 79642
||| || | ||| || | || | |||| || |||| |||||||||||
Sbjct 327192 ATC-ATCAGCAACTTGAATACACGATGGTAAAGCGATGGAGGCCAAGTTACAAACGGCAG 327250
Query 79643 CCTCATTAGCATCCGCATATTGTATTATTTCAGTGCAGAGGTTACTACACTTAATGGTTC 79702
||||| || | | || | | |||||| || | |||| | |||||||| |
Sbjct 327251 TCTCATCAGGTGCTGAGTACTCAACGATTTCACAACACAAGTTAGAGGATTTAATGGTAC 327310
Query 79703 CTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTAC 79762
| || || | ||| || |||||| | ||||| ||||| || ||||| ||||| |||||||
Sbjct 327311 CCAAGTTCTTTTGGTTGCTCTTTATATTACAGGCATCTTTGTAAAGCATGAATGGAGTAC 327370
Query 79763 CAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGACT 79822
|||| || | |||||||| | || || | ||| | | |||| || || || ||
Sbjct 327371 CAGTCTCTGTTTGAGATTCCAAGATAGCGTACCACAGTTTTTGAGCTTTGAT---AGTCT 327427
Query 79823 TG-TATCTCTT--TTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAA 79879
| || | | ||| |||| || ||| || ||| || || || || |||
Sbjct 327428 TTCTACCACGACCTTCAGCGACGTAACGTTCATACAAGGCTTCAAATTCATCACCATAAA 327487
Query 79880 CATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTA 79939
|||| || || ||| ||| ||| | | ||| | ||| || |||| || | |
Sbjct 327488 CATCAGACAAACCTGGAGCTTCACTTGGAGAGAACAAAGTCCATTCACCATTCTCTTGAA 327547
Query 79940 CTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCT 79999
| |||||||| || | ||| |||||||| || ||| || | |||||| | | | ||
Sbjct 327548 CACGTTTCATGAACAAATCTGGAATCCAGAGGGCTGGGAACAAATCTCTTGCACGAATCT 327607
Query 80000 CCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTT 80059
| || || || ||||| | ||| | ||| | | || || | ||||| ||||
Sbjct 327608 CTTCCTTACCGTGGTTCTTCCGGATATCTATGAAATCAAAGATGTCTGCGTGCCATGGTT 327667
Query 80060 CCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGG 80119
||||||| | || | | | || || | |||||| || || ||||| | || | ||| |
Sbjct 327668 CCAAGTACAAAGCGAAAGCACCTGGCCTTTTGTTACCACCTTGATCCACATAACGAGCAG 327727
Query 80120 TGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGA 80179
|||| || | || | | ||| || || | || || || ||||| || || || | |
Sbjct 327728 TGTTGTTGAAGACACGTACCATGGGGATCAACCCGTTCGAAGTACCGTTAGTACCTGCAA 327787
Query 80180 TATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAG 80239
|||| || | | |||||| || || | ||| || || || || | ||||
Sbjct 327788 TATATGAACCCGTAGAACGAATGTTGTGTATGTGCAAACCAATACCACCAGCGGTCTTAG 327847
Query 80240 AGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGT 80299
| || | || ||| || || ||||| || || ||||| ||| ||||| |||||
Sbjct 327848 AAATCATAGCACATTCCTTCAAAGTATCGTAAATACCCTCGATGGAGTCATCCTTCATGG 327907
Query 80300 TAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAG 80359
| ||| ||||| |||||| || | || ||| || ||||| || | || ||||
Sbjct 327908 CGATTAGGAAACATGAAGACATCTGAGGGCGTGGAGTACCAGCATTGAAAAGAGTTGGAG 327967
Query 80360 AAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATAT 80419
|||| || | || || | |||| ||||| || ||||||||||| || || || |
Sbjct 327968 AAGCATGAATGAAGTATCTCAAGGACATCAGATTATAAGTCTCAATAGCAGACTCGATGT 328027
Query 80420 CCCATTGATGAATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCT 80479
| |||||| || || || || | ||| | ||| || ||||| | |||| ||| |
Sbjct 328028 CGTCACCATGAATACCAACAGCAACTCTCATAATCATATGTTGAGGACGTTCAGCGACTT 328087
Query 80480 TGTTATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA-- 80537
|||||| ||| || ||||| |||| |||||| || ||||||||||| |
Sbjct 328088 CACCATTTATCCTCAGCAGATAAGAACGCTCCAGAGTTTTGAACCCAAAATAGTTAAAGT 328147
Query 80538 TGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTAC 80597
||||| |||| || |||| |||| | ||||| | | |||||||| |||||| || |
Sbjct 328148 TGAAA--TCTCTATCATAAACAATAGCAGAGTTCAACTCATCCTTATGTTTGTTGACGAT 328205
Query 80598 ATCCAT--GGTGATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAG 80655
||||| | | | || || || |||||||| ||| || || || || ||||||
Sbjct 328206 GTCCATAACCTCTTGC--GAGATCATAGGAGAATGAACCCCGTTCTTTGGGTTCACATAG 328263
Query 80656 TTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGAT 80715
||||| || || || || | | ||| |||| | || | |||||| | ||| ||
Sbjct 328264 TTGAACAATTCACTCACAACCTGAGAAAACTGTTTAGTAGTCTGCTTGTGCAAATTAGAG 328323
Query 80716 ACGGCTATTCTGGCGGCTAAAATGGCATAATCTGGATGTTGTGTAGTACAAGTGGCTGCT 80775
| |||||||| ||||| ||| | |||||||| ||||| || || | ||
Sbjct 328324 ATAGCTATTCTAGCGGCCAAAGTAGCATAATCAGGATGCACAGTCGTCATATACGCACAA 328383
Query 80776 ATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTTGGATA 80835
|||| || |||| | |||||||||| || || || || || | ||| | || ||
Sbjct 328384 GTTTCAGCAGCCAAATTGTCCAATTCAACAGTAGTCACACCTTCATAGACACCAGAAATG 328443
Query 80836 ACCTTCATAGCTATTTTAATAGGATCTATATGATCAGTGTTTAAGCCATAACATAATTTT 80895
| | | || |||| || ||| ||||| ||| || || ||||| ||||| |
Sbjct 328444 ATACGCTGGGTGATCTTAACAGCATCAATATGTGCAGGGTCTAGACCATAGCATAAACGT 328503
Query 80896 CTAATACGAGACGTGATTTTATCAAACATGACATTTTCCTT 80936
||||| | || || || || ||| | |||| ||||||
Sbjct 328504 GATATACGTGCAGTAATCTTGTCGAACCTAACATGTTCCTT 328544
>seq4
Length=1065440
Score = 269 bits (298), Expect = 4e-67
Identities = 418/594 (70%), Gaps = 10/594 (2%)
Strand=Plus/Plus
Query 49959 ACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAG 50018
|||||| |||||| || | ||| || ||||| | || | |||||| |||||||| ||
Sbjct 811210 ACATGCAAAATCGGTATGTAAACCTTCATCTCTGCAGATCAATTCGTTAGAAAACGTTAG 811269
Query 50019 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAA 50078
|| |||||||| || ||| || | ||| || || | ||||| || || ||||||||
Sbjct 811270 ACCTGGCATTAGACCTTTCTTCTTCAACCAGAAGATAGCAGCAAAGGAACCTGAAAAGAA 811329
Query 50079 GATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGG---CGCTGTCATG 50135
|| ||||| | || || || ||||| | ||||||| | | | | | ||||| ||
Sbjct 811330 AATACCTTCAATGGCAGCGAAAGCAACCAATCTCTCTGCGAAGATAGATTCACTGTCCTG 811389
Query 50136 TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATT 50195
||||| | |||||| |||||||||| ||| | ||| || |||| || |||||
Sbjct 811390 AATCCATCTGATAGCCCATTCGGCCTTCTCTTTAATCTGAGGAATGTTTTCAATCGCATT 811449
Query 50196 AAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACAT 50255
|| | | | |||| || ||| || | ||||||||| || || || ||| |
Sbjct 811450 GAATAAGAAATCGCTTTCCTTTGGATCCTTGATATAAGTATCAATTAACAGGGAATAGGT 811509
Query 50256 TTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAAT 50315
|| || ||||||||||| || || || || || ||||||||| |||| || | |||
Sbjct 811510 CTCTGAGTGAATGTTTTCCATCATGATTTGGAAACCATAGAAACATTTAGCTTCTGGAAT 811569
Query 50316 CTGCACTTCTGTAC--AAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCT 50373
|||||||||| || ||| || ||| ||||||| ||||| ||||| || ||| |||
Sbjct 811570 TTGCACTTCTGCACTGAAATTC--TCAACTAAATTCTCATTTACTATACCATCAGAGGCA 811627
Query 50374 GCAAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTA---GTTTATTC 50430
||||| || ||||| ||| | || ||| | ||||||| | | | ||||||
Sbjct 811628 GCAAAGAAGGCCAAGACACGGGAGATGAAAAATCTTTCGTTCTCATTCATACGGTTATTC 811687
Query 50431 CAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCC 50490
||||||| ||||| || || | ||| | ||||| | ||||| || || ||||||||
Sbjct 811688 CAATCATGAATATCCTTCGACAGATCAATCTCTTCGGCCGTCCAGAACGAAGCCTCTGCT 811747
Query 50491 TTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAATCTA 50544
| |||||| | ||| || ||||| |||| ||||||||| | ||||||||||
Sbjct 811748 CTCTTATACGCTTGCCAAATCTCATGGTATTTGATTGGGAATAGAACAAATCTA 811801
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718268297211840
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