Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F002214845.1_202017-07- 05] 56 sequences; 9,683,383 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq7 392 5e-104 seq4 269 4e-67 >seq7 Length=810710 Score = 392 bits (434), Expect = 5e-104 Identities = 1454/2261 (64%), Gaps = 43/2261 (2%) Strand=Plus/Plus Query 78708 CTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCC 78767 |||||| | ||||||||||| | ||| || |||| || || | || |||||||| || Sbjct 326295 CTTGTCAATGGTGAATTGAATAGCAGCAGAAGCGGCTTGTGTCCTCAGGTAGTACATACC 326354 Query 78768 CGTTTTTAGACCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCGG 78827 || || | ||| |||| ||||||||||||||||| || | ||| | | || Sbjct 326355 AGTCTTCAAACCCTTCTTCCAACCGTAGAAATGCATACTAGTCAATTTACCCATAGTTGG 326414 Query 78828 ATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGC 78887 | | || || || |||| ||||| ||||||||| | | | | || || || Sbjct 326415 AGCACGGATGTGAATGTTCAATGATTGGGACTGATCGATGTAAACAGCACGATCAGCTGC 326474 Query 78888 CATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATAT 78946 ||| | ||||| || ||||| | |||||||||| ||| || || || || ||| | | Sbjct 326475 CATCTCGATGATAGTTTTTTGAGAGATTTCCCAAACAGTCTTGTACAAATCCTTTAGT-T 326533 Query 78947 CTTCTGGAAGGTTTGT---ATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGA 79003 ||| |||| || | ||| || ||||| ||| ||| | || || | ||| | Sbjct 326534 CTTGAGGAATATTCGGTAGATTTTGGATGGAGCCATTATCAGTGATGATGTGTTGCTTCA 326593 Query 79004 TCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTT 79063 | |||| ||| | | ||| ||| | | || | | || || || | || Sbjct 326594 TACTATCATCCCAGATACCTAGGTCGACCAAATCACGTAGCAAGTAAGGGTTGACAATTT 326653 Query 79064 GAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGATT 79123 | ||||| || || || || | |||| ||| ||||| || ||||| || | | | Sbjct 326654 GGAATTCACCGGATAACACACGACGAGAGTACATATTGGAAGTGTATGGCTCGAAACACT 326713 Query 79124 CATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTAT 79183 | || | || | ||| || | ||| || || |||||||| || |||| | ||| | Sbjct 326714 CGTTGTAACCTAGAATCTGGGAAGTCGACGCAGTTGGCATTGGGGCCAATAGCAAAGAGT 326773 Query 79184 TTCTAAGACCGTATGATCTGATTTTATCTTTTAGAGATTCCCAATCCCAAAGATCAGACG 79243 |||||| ||| ||| |||| | | || | || ||||||||||| ||||| || | Sbjct 326774 TTCTAACACCATATTCCTTGATGCTTTTCTTCAAAGTGTCCCAATCCCATAGATCCGATG 326833 Query 79244 GGACAACATTCCAAAGATCATATTGTAGAATACCGTTACT-AGCGTATGATCCTGTGTAT 79302 | ||||| ||||| || || | |||||| | | | | | || ||| || Sbjct 326834 GTTTGGTGTTCCACAGATCGTACTGCAAAATACCTTGAGAGATTGGA-GAACCTTCATAA 326892 Query 79303 GTTTCATAAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCCGTAATAA 79362 || |||||||| ||||| | || || ||||| || || || | ||| || Sbjct 326893 GTGGAGTAAGGTCCATCCTTCTTCGCCAACTCACAGGAGGCTTCCAAAGAAGCGTGGTAG 326952 Query 79363 ATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATCAAATGGATAATTT 79422 || |||||||| || | | || ||||| | |||||| | ||||||||| | Sbjct 326953 ATAGTTTCGAAGATTTGGATGTTTAGATCCTTGGCTTCTTGAGACTCAAATGGAACACGC 327012 Query 79423 AAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTA 79482 || | |||||| |||| || || || | ||||| | | | |||||||| | |||| || Sbjct 327013 AACATCATAAACACGTCAGCCAAACCATTGACACCTAGAGCCATAGGTCTGTTTCTCATA 327072 Query 79483 TTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTC 79542 ||||| || |||||| |||| || || || || ||| || | || || | || Sbjct 327073 TTAGAGTTTCTAGCTTCAGGAACTGGGTAGTAGTTTCGATCGATGACCTTGTTCAAGTTA 327132 Query 79543 CTGACT-ATTACTTTGACCACATCCTTTAGTTTGAGAAAATCAAATC-----GTC----C 79592 | || | || || ||| | | | | | ||| ||||||| | | ||| | Sbjct 327133 C-GAGTGATAACCTTGGCAATTTTATGCAACTTGGCAAAATCATACCACTGGGTCTTACC 327191 Query 79593 ATCTATTACAAACATG--TTCA--------ACGCGACAGATGCCAGATTACAAACGGCTA 79642 ||| || | ||| || | || | |||| || |||| ||||||||||| Sbjct 327192 ATC-ATCAGCAACTTGAATACACGATGGTAAAGCGATGGAGGCCAAGTTACAAACGGCAG 327250 Query 79643 CCTCATTAGCATCCGCATATTGTATTATTTCAGTGCAGAGGTTACTACACTTAATGGTTC 79702 ||||| || | | || | | |||||| || | |||| | |||||||| | Sbjct 327251 TCTCATCAGGTGCTGAGTACTCAACGATTTCACAACACAAGTTAGAGGATTTAATGGTAC 327310 Query 79703 CTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTAC 79762 | || || | ||| || |||||| | ||||| ||||| || ||||| ||||| ||||||| Sbjct 327311 CCAAGTTCTTTTGGTTGCTCTTTATATTACAGGCATCTTTGTAAAGCATGAATGGAGTAC 327370 Query 79763 CAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGACT 79822 |||| || | |||||||| | || || | ||| | | |||| || || || || Sbjct 327371 CAGTCTCTGTTTGAGATTCCAAGATAGCGTACCACAGTTTTTGAGCTTTGAT---AGTCT 327427 Query 79823 TG-TATCTCTT--TTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAA 79879 | || | | ||| |||| || ||| || ||| || || || || ||| Sbjct 327428 TTCTACCACGACCTTCAGCGACGTAACGTTCATACAAGGCTTCAAATTCATCACCATAAA 327487 Query 79880 CATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTA 79939 |||| || || ||| ||| ||| | | ||| | ||| || |||| || | | Sbjct 327488 CATCAGACAAACCTGGAGCTTCACTTGGAGAGAACAAAGTCCATTCACCATTCTCTTGAA 327547 Query 79940 CTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCT 79999 | |||||||| || | ||| |||||||| || ||| || | |||||| | | | || Sbjct 327548 CACGTTTCATGAACAAATCTGGAATCCAGAGGGCTGGGAACAAATCTCTTGCACGAATCT 327607 Query 80000 CCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTT 80059 | || || || ||||| | ||| | ||| | | || || | ||||| |||| Sbjct 327608 CTTCCTTACCGTGGTTCTTCCGGATATCTATGAAATCAAAGATGTCTGCGTGCCATGGTT 327667 Query 80060 CCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGG 80119 ||||||| | || | | | || || | |||||| || || ||||| | || | ||| | Sbjct 327668 CCAAGTACAAAGCGAAAGCACCTGGCCTTTTGTTACCACCTTGATCCACATAACGAGCAG 327727 Query 80120 TGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGA 80179 |||| || | || | | ||| || || | || || || ||||| || || || | | Sbjct 327728 TGTTGTTGAAGACACGTACCATGGGGATCAACCCGTTCGAAGTACCGTTAGTACCTGCAA 327787 Query 80180 TATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAG 80239 |||| || | | |||||| || || | ||| || || || || | |||| Sbjct 327788 TATATGAACCCGTAGAACGAATGTTGTGTATGTGCAAACCAATACCACCAGCGGTCTTAG 327847 Query 80240 AGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGT 80299 | || | || ||| || || ||||| || || ||||| ||| ||||| ||||| Sbjct 327848 AAATCATAGCACATTCCTTCAAAGTATCGTAAATACCCTCGATGGAGTCATCCTTCATGG 327907 Query 80300 TAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAG 80359 | ||| ||||| |||||| || | || ||| || ||||| || | || |||| Sbjct 327908 CGATTAGGAAACATGAAGACATCTGAGGGCGTGGAGTACCAGCATTGAAAAGAGTTGGAG 327967 Query 80360 AAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATAT 80419 |||| || | || || | |||| ||||| || ||||||||||| || || || | Sbjct 327968 AAGCATGAATGAAGTATCTCAAGGACATCAGATTATAAGTCTCAATAGCAGACTCGATGT 328027 Query 80420 CCCATTGATGAATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCT 80479 | |||||| || || || || | ||| | ||| || ||||| | |||| ||| | Sbjct 328028 CGTCACCATGAATACCAACAGCAACTCTCATAATCATATGTTGAGGACGTTCAGCGACTT 328087 Query 80480 TGTTATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA-- 80537 |||||| ||| || ||||| |||| |||||| || ||||||||||| | Sbjct 328088 CACCATTTATCCTCAGCAGATAAGAACGCTCCAGAGTTTTGAACCCAAAATAGTTAAAGT 328147 Query 80538 TGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTAC 80597 ||||| |||| || |||| |||| | ||||| | | |||||||| |||||| || | Sbjct 328148 TGAAA--TCTCTATCATAAACAATAGCAGAGTTCAACTCATCCTTATGTTTGTTGACGAT 328205 Query 80598 ATCCAT--GGTGATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAG 80655 ||||| | | | || || || |||||||| ||| || || || || |||||| Sbjct 328206 GTCCATAACCTCTTGC--GAGATCATAGGAGAATGAACCCCGTTCTTTGGGTTCACATAG 328263 Query 80656 TTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGAT 80715 ||||| || || || || | | ||| |||| | || | |||||| | ||| || Sbjct 328264 TTGAACAATTCACTCACAACCTGAGAAAACTGTTTAGTAGTCTGCTTGTGCAAATTAGAG 328323 Query 80716 ACGGCTATTCTGGCGGCTAAAATGGCATAATCTGGATGTTGTGTAGTACAAGTGGCTGCT 80775 | |||||||| ||||| ||| | |||||||| ||||| || || | || Sbjct 328324 ATAGCTATTCTAGCGGCCAAAGTAGCATAATCAGGATGCACAGTCGTCATATACGCACAA 328383 Query 80776 ATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTTGGATA 80835 |||| || |||| | |||||||||| || || || || || | ||| | || || Sbjct 328384 GTTTCAGCAGCCAAATTGTCCAATTCAACAGTAGTCACACCTTCATAGACACCAGAAATG 328443 Query 80836 ACCTTCATAGCTATTTTAATAGGATCTATATGATCAGTGTTTAAGCCATAACATAATTTT 80895 | | | || |||| || ||| ||||| ||| || || ||||| ||||| | Sbjct 328444 ATACGCTGGGTGATCTTAACAGCATCAATATGTGCAGGGTCTAGACCATAGCATAAACGT 328503 Query 80896 CTAATACGAGACGTGATTTTATCAAACATGACATTTTCCTT 80936 ||||| | || || || || ||| | |||| |||||| Sbjct 328504 GATATACGTGCAGTAATCTTGTCGAACCTAACATGTTCCTT 328544 >seq4 Length=1065440 Score = 269 bits (298), Expect = 4e-67 Identities = 418/594 (70%), Gaps = 10/594 (2%) Strand=Plus/Plus Query 49959 ACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAG 50018 |||||| |||||| || | ||| || ||||| | || | |||||| |||||||| || Sbjct 811210 ACATGCAAAATCGGTATGTAAACCTTCATCTCTGCAGATCAATTCGTTAGAAAACGTTAG 811269 Query 50019 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAA 50078 || |||||||| || ||| || | ||| || || | ||||| || || |||||||| Sbjct 811270 ACCTGGCATTAGACCTTTCTTCTTCAACCAGAAGATAGCAGCAAAGGAACCTGAAAAGAA 811329 Query 50079 GATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGG---CGCTGTCATG 50135 || ||||| | || || || ||||| | ||||||| | | | | | ||||| || Sbjct 811330 AATACCTTCAATGGCAGCGAAAGCAACCAATCTCTCTGCGAAGATAGATTCACTGTCCTG 811389 Query 50136 TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATT 50195 ||||| | |||||| |||||||||| ||| | ||| || |||| || ||||| Sbjct 811390 AATCCATCTGATAGCCCATTCGGCCTTCTCTTTAATCTGAGGAATGTTTTCAATCGCATT 811449 Query 50196 AAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACAT 50255 || | | | |||| || ||| || | ||||||||| || || || ||| | Sbjct 811450 GAATAAGAAATCGCTTTCCTTTGGATCCTTGATATAAGTATCAATTAACAGGGAATAGGT 811509 Query 50256 TTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAAT 50315 || || ||||||||||| || || || || || ||||||||| |||| || | ||| Sbjct 811510 CTCTGAGTGAATGTTTTCCATCATGATTTGGAAACCATAGAAACATTTAGCTTCTGGAAT 811569 Query 50316 CTGCACTTCTGTAC--AAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCT 50373 |||||||||| || ||| || ||| ||||||| ||||| ||||| || ||| ||| Sbjct 811570 TTGCACTTCTGCACTGAAATTC--TCAACTAAATTCTCATTTACTATACCATCAGAGGCA 811627 Query 50374 GCAAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTA---GTTTATTC 50430 ||||| || ||||| ||| | || ||| | ||||||| | | | |||||| Sbjct 811628 GCAAAGAAGGCCAAGACACGGGAGATGAAAAATCTTTCGTTCTCATTCATACGGTTATTC 811687 Query 50431 CAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCC 50490 ||||||| ||||| || || | ||| | ||||| | ||||| || || |||||||| Sbjct 811688 CAATCATGAATATCCTTCGACAGATCAATCTCTTCGGCCGTCCAGAACGAAGCCTCTGCT 811747 Query 50491 TTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAATCTA 50544 | |||||| | ||| || ||||| |||| ||||||||| | |||||||||| Sbjct 811748 CTCTTATACGCTTGCCAAATCTCATGGTATTTGATTGGGAATAGAACAAATCTA 811801 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718268297211840