Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F002214845.1_202017-07- 05] 56 sequences; 9,683,383 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq7 309 4e-79 seq4 264 2e-65 >seq7 Length=810710 Score = 309 bits (342), Expect = 4e-79 Identities = 1431/2259 (63%), Gaps = 43/2259 (2%) Strand=Plus/Plus Query 70791 CTTGTCCAATGTAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAGATAGTACATGCC 70850 |||||| | || || ||||| | || || ||||||| || | || |||||||| || Sbjct 326295 CTTGTCAATGGTGAATTGAATAGCAGCAGAAGCGGCTTGTGTCCTCAGGTAGTACATACC 326354 Query 70851 TGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGA-ATAGCTAG 70909 || || | ||| |||| ||||| ||||||||||| || | ||| |||| | | Sbjct 326355 AGTCTTCAAACCCTTCTTCCAACCGTAGAAATGCATACTAGTCAATTTACCCATAGTT-G 326413 Query 70910 GATCGGCTATGTGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAG 70969 || | |||||||| |||| || || ||||||||| | | | | || || | Sbjct 326414 GAGCACGGATGTGAATGTTCAATGATTGGGACTGATCGATGTAAACAGCACGATCAGCTG 326473 Query 70970 CCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATA 71028 |||| | ||||| || ||||| | |||||||||| ||| || || || || ||| | Sbjct 326474 CCATCTCGATGATAGTTTTTTGAGAGATTTCCCAAACAGTCTTGTACAAATCCTTTAGT- 326532 Query 71029 TCTTCTGGAAGGTTTGT---ATTCTGAATGGATCCACCATCTGCAATAATCCTATTTTTG 71085 |||| |||| || | ||| || ||||| ||| ||| | || || | || Sbjct 326533 TCTTGAGGAATATTCGGTAGATTTTGGATGGAGCCATTATCAGTGATGATGTGTTGCTTC 326592 Query 71086 ATCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACTACT 71145 || |||| ||| | | ||| ||| | | || | | ||| || || | | Sbjct 326593 ATACTATCATCCCAGATACCTAGGTCGACCAAATCACGTAGCAAGTAAGGGTTGACAATT 326652 Query 71146 TGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACTGAC 71205 || ||||| || || || || | ||||| ||| ||||| || || || || | || Sbjct 326653 TGGAATTCACCGGATAACACACGACGAGAGTACATATTGGAAGTGTATGGCTCGAAACAC 326712 Query 71206 TCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAGACTA 71265 || || | || | ||| || | ||| || ||||| ||||| || |||| | | | Sbjct 326713 TCGTTGTAACCTAGAATCTGGGAAGTCGACGCAGTTGGCATTGGGGCCAATAGCAAAGAG 326772 Query 71266 TTTCTAAGACCATGTGATCGGATTTTATCTTTTAGAGATTCCCAATTCCAAAGATCCGAT 71325 ||||||| ||||| | ||| | | || | || ||||||| ||| ||||||||| Sbjct 326773 TTTCTAACACCATATTCCTTGATGCTTTTCTTCAAAGTGTCCCAATCCCATAGATCCGAT 326832 Query 71326 GGTACAACNNNNNNNNNNNNNNNNNNNNNNATGCCGTTACT-AGCGTATGATCCTGCATA 71384 ||| || || | | | | | || ||| |||| Sbjct 326833 GGTTTGGTGTTCCACAGATCGTACTGCAAAATACCTTGAGAGATTGGA-GAACCTTCATA 326891 Query 71385 TGTATCGTATGGTCCTTCTTTTTCGGCTAGTTCACAACTCGCCTCTAATGCTCCATAATA 71444 || ||| ||||| || || | || | ||||| || || || | | | || Sbjct 326892 AGTGGAGTAAGGTCCATCCTTCTTCGCCAACTCACAGGAGGCTTCCAAAGAAGCGTGGTA 326951 Query 71445 AATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCCGGGCTATCAAATGGATAATT 71504 || |||||||| || | | || ||||| | ||||| | ||||||||| | Sbjct 326952 GATAGTTTCGAAGATTTGGATGTTTAGATCCTTGGCTTCTTGAGACTCAAATGGAACACG 327011 Query 71505 TAAGAGAATAAACGCGTCTGCTAATCCTTGAACGCCAATACCGATAGGTCTGTGTCTCTT 71564 || | |||||| |||| || || || | || || | | | |||||||||| |||| | Sbjct 327012 CAACATCATAAACACGTCAGCCAAACCATTGACACCTAGAGCCATAGGTCTGTTTCTCAT 327071 Query 71565 ATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATT 71624 |||||| || |||||| |||| || || || || ||| || | || || | || Sbjct 327072 ATTAGAGTTTCTAGCTTCAGGAACTGGGTAGTAGTTTCGATCGATGACCTTGTTCAAGTT 327131 Query 71625 TCTGACT-ATTACTTTGACCACATCCTTTAGTTTGAGAAAATCAAATCTC---------C 71674 | || | || || ||| | | | | | ||| ||||||| | | | | Sbjct 327132 AC-GAGTGATAACCTTGGCAATTTTATGCAACTTGGCAAAATCATACCACTGGGTCTTAC 327190 Query 71675 CATCTATTA-CAA-------ACACGTTC--AAGGCAACAGATGCCAGATTACAAACGGCT 71724 |||| || | ||| ||||| | || || | || |||| ||||||||||| Sbjct 327191 CATC-ATCAGCAACTTGAATACACGATGGTAAAGCGATGGAGGCCAAGTTACAAACGGCA 327249 Query 71725 ACCTCATTAGCATCGGCATATTGTATAATTTCAGTGCAAAGATTACTACACTTGATGGTT 71784 ||||| || | | || | | |||||| || | ||| | || ||||| Sbjct 327250 GTCTCATCAGGTGCTGAGTACTCAACGATTTCACAACACAAGTTAGAGGATTTAATGGTA 327309 Query 71785 CCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATAAACGGAGTA 71844 || || || | ||| || |||||| | ||||| ||||| || ||||| || || |||||| Sbjct 327310 CCCAAGTTCTTTTGGTTGCTCTTTATATTACAGGCATCTTTGTAAAGCATGAATGGAGTA 327369 Query 71845 CCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATATTC 71904 ||||| || | |||||||| | || || | ||| | | |||| || || | || Sbjct 327370 CCAGTCTCTGTTTGAGATTCCAAGATAGCGTACCACAGTTTTTGAGCTTTGATAGTCTT- 327428 Query 71905 TTGTATCTCTT--TTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAG 71962 | || | | ||| |||| || ||| || ||| || || || || || Sbjct 327429 -TCTACCACGACCTTCAGCGACGTAACGTTCATACAAGGCTTCAAATTCATCACCATAAA 327487 Query 71963 CATTGTCTAATCCAGGACATTCATTCGGACACATCAATGACCACTCTCCATCATCATTTA 72022 ||| || || ||| |||| | ||| | | ||| | ||| || |||| || | | Sbjct 327488 CATCAGACAAACCTGGAGCTTCACTTGGAGAGAACAAAGTCCATTCACCATTCTCTTGAA 327547 Query 72023 CTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCT 72082 | |||||||| || | ||| |||||||| || ||| || | |||||| | | | || Sbjct 327548 CACGTTTCATGAACAAATCTGGAATCCAGAGGGCTGGGAACAAATCTCTTGCACGAATCT 327607 Query 72083 CCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTT 72142 | || || || ||||| | ||| | ||| | | || || | ||||| |||| Sbjct 327608 CTTCCTTACCGTGGTTCTTCCGGATATCTATGAAATCAAAGATGTCTGCGTGCCATGGTT 327667 Query 72143 CCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGG 72202 ||||||| | || | | | || |||| |||||| || || ||||| | || | ||| | Sbjct 327668 CCAAGTACAAAGCGAAAGCACCTGGCCTTTTGTTACCACCTTGATCCACATAACGAGCAG 327727 Query 72203 TGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGA 72262 |||| || | || | | ||| || || | || || || | ||| || || || | | Sbjct 327728 TGTTGTTGAAGACACGTACCATGGGGATCAACCCGTTCGAAGTACCGTTAGTACCTGCAA 327787 Query 72263 TATAGCTTCCACTGGCACGAATATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAG 72322 |||| || | | |||||| ||| || | ||| || || || || | |||| Sbjct 327788 TATATGAACCCGTAGAACGAATGTTGTGTATGTGCAAACCAATACCACCAGCGGTCTTAG 327847 Query 72323 AGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGT 72382 | || | || ||| || || ||||| || || ||||| || |||||| ||||| Sbjct 327848 AAATCATAGCACATTCCTTCAAAGTATCGTAAATACCCTCGATGGAGTCATCCTTCATGG 327907 Query 72383 TAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAG 72442 | ||| ||||| |||||| || | || ||| || ||||| || | || |||| Sbjct 327908 CGATTAGGAAACATGAAGACATCTGAGGGCGTGGAGTACCAGCATTGAAAAGAGTTGGAG 327967 Query 72443 AAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATAT 72502 |||| || | || || | |||| ||||| || ||||||||||| || || || | Sbjct 327968 AAGCATGAATGAAGTATCTCAAGGACATCAGATTATAAGTCTCAATAGCAGACTCGATGT 328027 Query 72503 CCCATTGATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCT 72562 | ||| || || || || || | ||| | |||||| ||||| | |||| ||| | Sbjct 328028 CGTCACCATGAATACCAACAGCAACTCTCATAATCATATGTTGAGGACGTTCAGCGACTT 328087 Query 72563 TGTTATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA-- 72620 |||||| ||| || || || |||| |||||| || ||||||||||| | Sbjct 328088 CACCATTTATCCTCAGCAGATAAGAACGCTCCAGAGTTTTGAACCCAAAATAGTTAAAGT 328147 Query 72621 TGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGTTTATCCTTATATTTGTTAACTAT 72680 ||||| |||| || |||| |||| | || || | | |||||||| |||||| || || Sbjct 328148 TGAAA--TCTCTATCATAAACAATAGCAGAGTTCAACTCATCCTTATGTTTGTTGACGAT 328205 Query 72681 ATCCAT--GGTGATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAG 72738 ||||| | | | || || || |||||||| ||| || || || || |||||| Sbjct 328206 GTCCATAACCTCTTGC--GAGATCATAGGAGAATGAACCCCGTTCTTTGGGTTCACATAG 328263 Query 72739 TTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGAT 72798 ||||| || || || || | | ||| |||| | || | |||||| | ||| || Sbjct 328264 TTGAACAATTCACTCACAACCTGAGAAAACTGTTTAGTAGTCTGCTTGTGCAAATTAGAG 328323 Query 72799 ACGGCTATTCTGGCGGCTAGAATGGCATAATCTGGATGTTGTGTAGTACAAGTGGCTGCT 72858 | |||||||| ||||| | | | |||||||| ||||| || || | || Sbjct 328324 ATAGCTATTCTAGCGGCCAAAGTAGCATAATCAGGATGCACAGTCGTCATATACGCACAA 328383 Query 72859 ATTTCTGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTTGGATA 72918 |||| || |||| | |||||||||| || || || || || | ||| | || || Sbjct 328384 GTTTCAGCAGCCAAATTGTCCAATTCAACAGTAGTCACACCTTCATAGACACCAGAAATG 328443 Query 72919 ACCTTCATAGCTATTTTAATAGGATCTATATGATCAGTGTTTAAGCCATAACATAATTTT 72978 | | | || |||| || ||| ||||| ||| || || ||||| ||||| | Sbjct 328444 ATACGCTGGGTGATCTTAACAGCATCAATATGTGCAGGGTCTAGACCATAGCATAAACGT 328503 Query 72979 CTAATACGAGACGTGATTTTATCAAACATAACATTTTCC 73017 ||||| | || || || || ||| |||||| |||| Sbjct 328504 GATATACGTGCAGTAATCTTGTCGAACCTAACATGTTCC 328542 >seq4 Length=1065440 Score = 264 bits (292), Expect = 2e-65 Identities = 598/890 (67%), Gaps = 22/890 (2%) Strand=Plus/Plus Query 41774 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTCCAATGATATATTT 41833 || ||||| ||| || | |||||||||||||| ||||| || ||| || || || Sbjct 810920 TTCTGGTAGTCAGAGACTCTCTTTTCGAAAAAATTGGTCTTACCAGCCAGCGAGATGTTC 810979 Query 41834 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 41893 |||||||||||||| || || || || || ||| ||| || || || | | Sbjct 810980 TCCATGAAATCAAATGGGTTAGTCACGTTGAAAAATTTCTTGTTCCCGAAAGCGACCAGT 811039 Query 41894 AATCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 41953 | |||||| |||| ||| || | || ||||||| || ||||| || | | Sbjct 811040 AGTCTATCAGCGACGAACTCAACGTACTGGTTCATCAGGTCGGCGTTCATACCCAATAAA 811099 Query 41954 TTAACTGGAAGAGCCACAGT-AAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAAT 42012 ||| || ||||| | | ||| | |||| ||| || ||| || || || ||||| Sbjct 811100 GAAACGGGTAGAGCATCGATGAAGTACCTCTT-TTCGATCTCGACGGCTTCAGTAATAAT 811158 Query 42013 AGATCTTACTGTTTCTTCAC---TC-GGTGGATACAATAAATGTTTAAACATCAAACATG 42068 ||| | | | | || || || | ||||| ||| | | ||||| Sbjct 811159 ----CTTTTCGATAATGGAAGGATCTGGCTTATTCTTCAAATGAGCAAATAGTAGACATG 811214 Query 42069 CGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGG 42128 | |||||| || | ||| |||||||| | || |||||||| |||||||| || || | Sbjct 811215 CAAAATCGGTATGTAAACCTTCATCTCTGCAGATCAATTCGTTAGAAAACGTTAGACCTG 811274 Query 42129 GCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTC 42188 ||||||| || ||| || | ||| || |||| ||||| || || |||||||| || | Sbjct 811275 GCATTAGACCTTTCTTCTTCAACCAGAAGATAGCAGCAAAGGAACCTGAAAAGAAAATAC 811334 Query 42189 CTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CACTGTCATGTATCC 42245 |||| | || || || |||| | ||||||| | | | ||||||| || |||| Sbjct 811335 CTTCAATGGCAGCGAAAGCAACCAATCTCTCTGCGAAGATAGATTCACTGTCCTGAATCC 811394 Query 42246 ACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGA 42305 | | |||||| |||||||||| ||| | ||| || |||| || ||||| || | Sbjct 811395 ATCTGATAGCCCATTCGGCCTTCTCTTTAATCTGAGGAATGTTTTCAATCGCATTGAATA 811454 Query 42306 GATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATACATTTCTG 42365 | | |||| || ||| || | ||| ||||| || || || ||| | |||| Sbjct 811455 AGAAATCGCTTTCCTTTGGATCCTTGATATAAGTATCAATTAACAGGGAATAGGTCTCTG 811514 Query 42366 AATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACCTGTA 42425 | ||||||||||| || || || || || ||||||||| | || || | || || | Sbjct 811515 AGTGAATGTTTTCCATCATGATTTGGAAACCATAGAAACATTTAGCTTCTGGAATTTGCA 811574 Query 42426 CTTCTGTAC--AAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGCAAA 42483 |||||| || ||| || ||| ||||||| || || ||||| || ||| ||| ||||| Sbjct 811575 CTTCTGCACTGAAATTC--TCAACTAAATTCTCATTTACTATACCATCAGAGGCAGCAAA 811632 Query 42484 AAACGCCAATACATGTTTTATAAAATATTTTTCGTCCGGTGTTAAT----TTATTCCAAT 42539 || ||||| ||| | || ||| || |||||| | || || |||||||||| Sbjct 811633 GAAGGCCAAGACACGGGAGATGAAAAATCTTTCGTTC-TCATTCATACGGTTATTCCAAT 811691 Query 42540 CATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCTTTT 42599 ||| ||||| || || | ||| | ||||| ||||||| || || || ||||| | | Sbjct 811692 CATGAATATCCTTCGACAGATCAATCTCTTCGGCCGTCCAGAACGAAGCCTCTGCTCTCT 811751 Query 42600 TATACATATTCCAGATATCATGATATTGAATTGGGAAAATAACAAATCTA 42649 ||||| | ||| || ||||| |||| |||||||| | |||||||||| Sbjct 811752 TATACGCTTGCCAAATCTCATGGTATTTGATTGGGAATAGAACAAATCTA 811801 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671138730202560