Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F002214845.1_202017-07- 05] 56 sequences; 9,683,383 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq4 100 3e-16 >seq4 Length=1065440 Score = 100 bits (110), Expect = 3e-16 Identities = 271/408 (66%), Gaps = 15/408 (4%) Strand=Plus/Minus Query 50438 TTGAAGGTGTGtttttttCCGGTAGCTTTGCAGCCATATTTTACATTAAAACCTTAGGCA 50497 |||||||| | || ||||| ||| |||||| || || || | | || | ||| Sbjct 811340 TTGAAGGTATTTTCTTTTCAGGTTCCTTTGCTGCTATCTTCTGGTTGAAGAAGAAAGGTC 811281 Query 50498 TAATGCCCGGCCTCACGTTTAGCAACGAGTTGATTTCGCGCGACGAAGGAATGCACACAG 50557 ||||||| || || |||||| ||||| ||||| | | || ||||| | || || | Sbjct 811280 TAATGCCAGGTCTAACGTTTTCTAACGAATTGATCTGCAGAGATGAAGGTTTACATACCG 811221 Query 50558 ACTTTGCGTGTTTGTACTACAATACGCGCGTAAATGAAAAATTATC-ATACGAAACAATT 50616 | ||||| ||| |||| || || | | |||| ||| | | | | | ||| Sbjct 811220 ATTTTGCATGT-----CTACTATTTGCTCATT--TGAAGAATAAGCCAGATCCTTCCATT 811168 Query 50617 TTGGACATGTTCAAA---GAAGCCGTCGACATCGAAAAAGAGTTTTTCACGGACGCTTTA 50673 | || | | | | ||||||||||| |||||||| || |||| || ||| || Sbjct 811167 ATCGAAAAGATTATTACTGAAGCCGTCGAGATCGAAAAGAGGTACTTCATCGATGCTCTA 811108 Query 50674 CCCGTGGCATTGTTGGGCATGAACGCAGACATGATGTGCGAGTACATTGAGTTTGTTGCA 50733 ||||| | || ||||| |||||||| ||| ||||| | ||||| ||||||| || || Sbjct 811107 CCCGTTTCTTTATTGGGTATGAACGCCGACCTGATGAACCAGTACGTTGAGTTCGTCGCT 811048 Query 50734 GACAGA-TTGTTGTTGC-AGCTGGGACAACCGAAATACTATAATGCACGTAACCCCTTTC 50791 || ||| | | || || | || |||| ||||| | || | |||||| ||| Sbjct 811047 GATAGACTACTGGTCGCTTTCGGGAACAA--GAAATTTTTCAACGTGACTAACCCATTTG 810990 Query 50792 CGTTTATGAATAACATATCGTTGGAGGGCAAAACAAACTTTTTCGAAA 50839 || ||| | ||||| ||| ||| || || || || |||||||||| Sbjct 810989 ATTTCATGGAGAACATCTCGCTGGCTGGTAAGACCAATTTTTTCGAAA 810942 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 507014045089920