Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F002214845.1_202017-07- 05] 56 sequences; 9,683,383 total letters Query= NC_005068.1 Length=110907 Score E Sequences producing significant alignments: (Bits) Value seq6 95.1 9e-15 seq2 89.7 4e-13 seq8 87.8 1e-12 >seq6 Length=935435 Score = 95.1 bits (104), Expect = 9e-15 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 43892 CAACCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCG 43951 ||||| || | |||||| || |||| ||| | || || || || || || |||||| Sbjct 585581 CAACCACCACGCAATCTCAAAACCAGATGCAAAGTAGATTCCTTCTGGATGTTGTAATCG 585640 Query 43952 TTTAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGA 44011 || | |||| || | ||| || ||||| || ||||| | ||| ||||| | Sbjct 585641 GATAGAGTTCTTCCATCTTCTAGTTGCTTACCTGCGAAGATCAATCTTTGTTGGTCAGGT 585700 Query 44012 GGTACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCC 44071 || | ||||||||||||| ||| || ||||| | ||| |||||| | | ||| Sbjct 585701 GGAATACCTTCTTTATCTTGAATCTTGCTCTTGACATTGTCAATAGTATCAGAGGACTCA 585760 Query 44072 ACATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || || | || || |||||||| ||||||||||| || || || ||||| Sbjct 585761 ACCTCCAGGGTGATGGTTTTACCAGTTAAAGTCTTGACGAAGATCTGCAT 585810 Score = 95.1 bits (104), Expect = 9e-15 Identities = 115/157 (73%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 43965 CATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTT 44024 |||| || | ||| || ||||| || ||||| | ||| ||||| | || | |||||||| Sbjct 587022 CATCTTCTAGTTGCTTACCTGCGAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCTT 587081 Query 44025 TATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAA 44084 ||||| ||| || ||||| | ||| |||||| | | ||| || || | || | Sbjct 587082 TATCTTGAATCTTGCTCTTGACATTGTCAATAGTATCAGAGGACTCAACCTCCAGGGTGA 587141 Query 44085 TTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 | |||||||| ||||||||||| ||||| || ||||| Sbjct 587142 TGGTTTTACCAGTTAAAGTCTTGACAAAAATCTGCAT 587178 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 43894 ACCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTT 43953 ||| || | |||||| || |||| ||| | || || || || || || |||||| Sbjct 585811 ACCACCACGCAATCTCAAAACCAGATGCAAAGTAGATTCCTTCTGGATGTTGTAATCGGA 585870 Query 43954 TAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013 || | |||| || | ||| || ||||| || ||||| | ||| ||||| | || Sbjct 585871 TAGAGTTCTTCCATCTTCTAGTTGCTTACCTGCGAAGATCAATCTTTGTTGGTCAGGTGG 585930 Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073 | ||||||||||||| ||| || ||||| | ||| |||||| | | ||| || Sbjct 585931 AATACCTTCTTTATCTTGAATCTTGCTCTTGACATTGTCAATAGTATCAGAGGACTCAAC 585990 Query 44074 ATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || | || || |||||||| ||||||||||| || || || ||||| Sbjct 585991 CTCCAGGGTGATGGTTTTACCAGTTAAAGTCTTGACGAAGATCTGCAT 586038 Score = 89.7 bits (98), Expect = 4e-13 Identities = 114/157 (73%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 43965 CATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTT 44024 |||| || | ||| || ||||| || ||||| | ||| ||||| | || | |||||||| Sbjct 586110 CATCTTCTAGTTGCTTACCTGCGAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCTT 586169 Query 44025 TATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAA 44084 ||||| ||| || ||||| | ||| |||||| | | ||| || || | || | Sbjct 586170 TATCTTGAATCTTGCTCTTGACATTGTCAATAGTATCAGAGGACTCAACCTCCAGGGTGA 586229 Query 44085 TTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 | |||||||| ||||||||||| || || || ||||| Sbjct 586230 TGGTTTTACCAGTTAAAGTCTTGACGAAGATCTGCAT 586266 Score = 89.7 bits (98), Expect = 4e-13 Identities = 114/157 (73%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 43965 CATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTT 44024 |||| || | ||| || ||||| || ||||| | ||| ||||| | || | |||||||| Sbjct 586338 CATCTTCTAGTTGCTTACCTGCGAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCTT 586397 Query 44025 TATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAA 44084 ||||| ||| || ||||| | ||| |||||| | | ||| || || | || | Sbjct 586398 TATCTTGAATCTTGCTCTTGACATTGTCAATAGTATCAGAGGACTCAACCTCCAGGGTGA 586457 Query 44085 TTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 | |||||||| ||||||||||| || || || ||||| Sbjct 586458 TGGTTTTACCAGTTAAAGTCTTGACGAAGATCTGCAT 586494 Score = 89.7 bits (98), Expect = 4e-13 Identities = 114/157 (73%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 43965 CATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTT 44024 |||| || | ||| || ||||| || ||||| | ||| ||||| | || | |||||||| Sbjct 586566 CATCTTCTAGTTGCTTACCTGCGAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCTT 586625 Query 44025 TATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAA 44084 ||||| ||| || ||||| | ||| |||||| | | ||| || || | || | Sbjct 586626 TATCTTGAATCTTGCTCTTGACATTGTCAATAGTATCAGAGGACTCAACCTCCAGGGTGA 586685 Query 44085 TTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 | |||||||| ||||||||||| || || || ||||| Sbjct 586686 TGGTTTTACCAGTTAAAGTCTTGACGAAGATCTGCAT 586722 Score = 89.7 bits (98), Expect = 4e-13 Identities = 114/157 (73%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 43965 CATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTT 44024 |||| || | ||| || ||||| || ||||| | ||| ||||| | || | |||||||| Sbjct 586794 CATCTTCTAGTTGCTTACCTGCGAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCTT 586853 Query 44025 TATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAA 44084 ||||| ||| || ||||| | ||| |||||| | | ||| || || | || | Sbjct 586854 TATCTTGAATCTTGCTCTTGACATTGTCAATAGTATCAGAGGACTCAACCTCCAGGGTGA 586913 Query 44085 TTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 | |||||||| ||||||||||| || || || ||||| Sbjct 586914 TGGTTTTACCAGTTAAAGTCTTGACGAAGATCTGCAT 586950 >seq2 Length=1385486 Score = 89.7 bits (98), Expect = 4e-13 Identities = 151/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 43894 ACCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTT 43953 ||| ||||||||||||| ||||| ||||| ||| || ||||| || || || ||| Sbjct 975408 ACCACCTCTCAATCTTAGAACCAAGTGTAGAGTGGATTCCTTTTGGATGTTGTAGTCGGA 975467 Query 43954 TAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013 || | | || |||||||| || || ||||| ||||| | ||| ||||| | || Sbjct 975468 CAAAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 975527 Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073 | |||||| || ||| ||| ||| ||||| | ||| ||| || | | || || Sbjct 975528 GATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAAC 975587 Query 44074 ATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAA 44112 || | || || || ||||| || |||||||| || || Sbjct 975588 TTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACGAA 975626 >seq8 Length=676247 Score = 87.8 bits (96), Expect = 1e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 43894 ACCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTT 43953 ||| ||||||||||||| ||||| || | ||| || ||||| || || || || Sbjct 115818 ACCACCTCTCAATCTTAGGACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCAGA 115877 Query 43954 TAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013 || | |||| |||||||| || || ||||| ||||| | ||| ||||| | || Sbjct 115878 CAAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 115937 Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073 | ||| || || ||| || || ||||| | ||| ||| || | | || || Sbjct 115938 GATACCCTCCTTGTCTTGGATCTTAGACTTGACATTGTCAATAGTGTCAGAAGATTCGAC 115997 Query 44074 ATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || | ||||| || |||||||| |||||||| || || |||||||| Sbjct 115998 TTCCAAGGTAATAGTCTTACCGGTCAAAGTCTTGACGAAAATTTGCAT 116045 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 354777357864288