Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F002214845.1_202017-07-
05] 56 sequences; 9,683,383 total letters
Query= NC_005179.1
Length=134721
Score E
Sequences producing significant alignments: (Bits) Value
seq4 188 6e-43
>seq4
Length=1065440
Score = 188 bits (208), Expect = 6e-43
Identities = 553/840 (66%), Gaps = 39/840 (5%)
Strand=Plus/Plus
Query 12875 ACTCTTTTTTCAAAAAAGTTTGTTTTTCCTTCTAACGAAATATTTTCCATAAAATCGAAA 12934
||||| ||||| ||||| || || || || | | ||| || || ||||| ||||| ||
Sbjct 810935 ACTCTCTTTTCGAAAAAATTGGTCTTACCAGCCAGCGAGATGTTCTCCATGAAATCAAAT 810994
Query 12935 GGATTTTTCGAACAAT--AGTATTTTTTACACCCTAATTCTAGTAACAATCTGTCAGCAA 12992
|| || || || | | |||| || ||| || | | | | ||| ||||| |
Sbjct 810995 GGGTTAGTC--ACGTTGAAAAATTTCTTGTTCCCGAAAGCGACCAGTAGTCTATCAGCGA 811052
Query 12993 CAAACTCTATGTACTGTTTCATTAAATCACAGTTCATTCCTATTAATTTTACAGGCATAG 13052
| ||||| | |||||| ||||| | || |||||| || | ||| || || | ||
Sbjct 811053 CGAACTCAACGTACTGGTTCATCAGGTCGGCGTTCATACCCAATAAAGAAACGGGTAGAG 811112
Query 13053 CTTCTGTTAAAAAGtttttttCTATATCAACTGCTTCGATAACTATGTCTCTTATTACGT 13112
| || | || | | ||||| || || || ||||| ||| || ||| |
Sbjct 811113 CATCGATGAAGTACCTCTTTTCGATCTCGACGGCTTCAGTAATAAT----CTT------T 811162
Query 13113 TCTCTAATGGA-GGATTTGATAGATGCTT---------AAACATCATACATGCAAAATCA 13162
|| ||||||| |||| || || ||| ||| | | ||||||||||||
Sbjct 811163 TCGATAATGGAAGGATCTGGCTTATTCTTCAAATGAGCAAATAGTAGACATGCAAAATCG 811222
Query 13163 CAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGACCCGGCATAAGC 13222
|| || ||||||||||| | || | ||||| ||||| |||||||| ||||| ||
Sbjct 811223 GTATGTAAACCTTCATCTCTGCAGATCAATTCGTTAGAAAACGTTAGACCTGGCATTAGA 811282
Query 13223 CCTCGTTTTTTAATCCAAAATATAGCAGCAAACGAACCCGaaaaaaaTATTCCTTCAACT 13282
||| || || | ||| || ||||||||||| ||||| ||||| || || |||||||
Sbjct 811283 CCTTTCTTCTTCAACCAGAAGATAGCAGCAAAGGAACCTGAAAAGAAAATACCTTCAATG 811342
Query 13283 GCTGCAAACGCTATCAACCTTTCACCATACGTA-CTATTTTTACT---CTCTATCCACTT 13338
|| || || || | ||| || || | || | || || ||| || ||||| |
Sbjct 811343 GCAGCGAAAGCAACCAATCTCTC----TGCGAAGATAGATTCACTGTCCTGAATCCATCT 811398
Query 13339 TCTGGCCCAGTTTGCTTTTTGTTTAA-CGCAGTTCATATTTTCTATTGCGTTAAATAAAT 13397
| ||||| | || || | ||||| | || || ||||| || || || |||||
Sbjct 811399 GATAGCCCATTCGGCCTTCTCTTTAATCTGAG-GAATGTTTTCAATCGCATTGAATAAGA 811457
Query 13398 AAtttttttCCTTACTGTCTAAAATATAAGTATCTATCAATAAGCTATACATTTCTGAAT 13457
||| ||||||| || ||||||||||| || || | | ||| | ||||| |
Sbjct 811458 AATCGCTTTCCTTTGGATCCTTGATATAAGTATCAATTAACAGGGAATAGGTCTCTGAGT 811517
Query 13458 GAATATTTTCCATCGCTATTTGGAAACCATAAAAACATCTAGCCTCTGATACCTGAACTT 13517
|||| ||||||||| |||||||||||||| |||||| |||| |||| | || ||||
Sbjct 811518 GAATGTTTTCCATCATGATTTGGAAACCATAGAAACATTTAGCTTCTGGAATTTGCACTT 811577
Query 13518 C-GGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACTATCCCGTCACTAGCAGCaaaaaaa 13576
| | | | |||| | || |||| || || || ||||| || ||| |||||||| ||
Sbjct 811578 CTGCACTGAAAT-TCTCAACTAAATTCTCATTTACTATACCATCAGAGGCAGCAAAGAAG 811636
Query 13577 GCAAGTATGTGCTTAATAAAttttttttCGTTTTCTGACA-AC--TTTAACCAATCTGGA 13633
|| | | | || || | ||||||| || || || || |||||| ||
Sbjct 811637 GCCAAGACACGGGAGATGAAAAATCTTTCGTTCTCATTCATACGGTTATTCCAATCATGA 811696
Query 13634 AAATCTTTTGATAAATCTACCTCCTCAACGGTCCAAAAAGAAGCAACAGCCTTCTTATAC 13693
| ||| || || | ||| | ||| || | ||||| || ||||| | || ||||||||
Sbjct 811697 ATATCCTTCGACAGATCAATCTCTTCGGCCGTCCAGAACGAAGCCTCTGCTCTCTTATAC 811756
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 430982105854512
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |