Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F002214845.1_202017-07- 05] 56 sequences; 9,683,383 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq4 188 6e-43 >seq4 Length=1065440 Score = 188 bits (208), Expect = 6e-43 Identities = 553/840 (66%), Gaps = 39/840 (5%) Strand=Plus/Plus Query 12875 ACTCTTTTTTCAAAAAAGTTTGTTTTTCCTTCTAACGAAATATTTTCCATAAAATCGAAA 12934 ||||| ||||| ||||| || || || || | | ||| || || ||||| ||||| || Sbjct 810935 ACTCTCTTTTCGAAAAAATTGGTCTTACCAGCCAGCGAGATGTTCTCCATGAAATCAAAT 810994 Query 12935 GGATTTTTCGAACAAT--AGTATTTTTTACACCCTAATTCTAGTAACAATCTGTCAGCAA 12992 || || || || | | |||| || ||| || | | | | ||| ||||| | Sbjct 810995 GGGTTAGTC--ACGTTGAAAAATTTCTTGTTCCCGAAAGCGACCAGTAGTCTATCAGCGA 811052 Query 12993 CAAACTCTATGTACTGTTTCATTAAATCACAGTTCATTCCTATTAATTTTACAGGCATAG 13052 | ||||| | |||||| ||||| | || |||||| || | ||| || || | || Sbjct 811053 CGAACTCAACGTACTGGTTCATCAGGTCGGCGTTCATACCCAATAAAGAAACGGGTAGAG 811112 Query 13053 CTTCTGTTAAAAAGtttttttCTATATCAACTGCTTCGATAACTATGTCTCTTATTACGT 13112 | || | || | | ||||| || || || ||||| ||| || ||| | Sbjct 811113 CATCGATGAAGTACCTCTTTTCGATCTCGACGGCTTCAGTAATAAT----CTT------T 811162 Query 13113 TCTCTAATGGA-GGATTTGATAGATGCTT---------AAACATCATACATGCAAAATCA 13162 || ||||||| |||| || || ||| ||| | | |||||||||||| Sbjct 811163 TCGATAATGGAAGGATCTGGCTTATTCTTCAAATGAGCAAATAGTAGACATGCAAAATCG 811222 Query 13163 CAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGACCCGGCATAAGC 13222 || || ||||||||||| | || | ||||| ||||| |||||||| ||||| || Sbjct 811223 GTATGTAAACCTTCATCTCTGCAGATCAATTCGTTAGAAAACGTTAGACCTGGCATTAGA 811282 Query 13223 CCTCGTTTTTTAATCCAAAATATAGCAGCAAACGAACCCGaaaaaaaTATTCCTTCAACT 13282 ||| || || | ||| || ||||||||||| ||||| ||||| || || ||||||| Sbjct 811283 CCTTTCTTCTTCAACCAGAAGATAGCAGCAAAGGAACCTGAAAAGAAAATACCTTCAATG 811342 Query 13283 GCTGCAAACGCTATCAACCTTTCACCATACGTA-CTATTTTTACT---CTCTATCCACTT 13338 || || || || | ||| || || | || | || || ||| || ||||| | Sbjct 811343 GCAGCGAAAGCAACCAATCTCTC----TGCGAAGATAGATTCACTGTCCTGAATCCATCT 811398 Query 13339 TCTGGCCCAGTTTGCTTTTTGTTTAA-CGCAGTTCATATTTTCTATTGCGTTAAATAAAT 13397 | ||||| | || || | ||||| | || || ||||| || || || ||||| Sbjct 811399 GATAGCCCATTCGGCCTTCTCTTTAATCTGAG-GAATGTTTTCAATCGCATTGAATAAGA 811457 Query 13398 AAtttttttCCTTACTGTCTAAAATATAAGTATCTATCAATAAGCTATACATTTCTGAAT 13457 ||| ||||||| || ||||||||||| || || | | ||| | ||||| | Sbjct 811458 AATCGCTTTCCTTTGGATCCTTGATATAAGTATCAATTAACAGGGAATAGGTCTCTGAGT 811517 Query 13458 GAATATTTTCCATCGCTATTTGGAAACCATAAAAACATCTAGCCTCTGATACCTGAACTT 13517 |||| ||||||||| |||||||||||||| |||||| |||| |||| | || |||| Sbjct 811518 GAATGTTTTCCATCATGATTTGGAAACCATAGAAACATTTAGCTTCTGGAATTTGCACTT 811577 Query 13518 C-GGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACTATCCCGTCACTAGCAGCaaaaaaa 13576 | | | | |||| | || |||| || || || ||||| || ||| |||||||| || Sbjct 811578 CTGCACTGAAAT-TCTCAACTAAATTCTCATTTACTATACCATCAGAGGCAGCAAAGAAG 811636 Query 13577 GCAAGTATGTGCTTAATAAAttttttttCGTTTTCTGACA-AC--TTTAACCAATCTGGA 13633 || | | | || || | ||||||| || || || || |||||| || Sbjct 811637 GCCAAGACACGGGAGATGAAAAATCTTTCGTTCTCATTCATACGGTTATTCCAATCATGA 811696 Query 13634 AAATCTTTTGATAAATCTACCTCCTCAACGGTCCAAAAAGAAGCAACAGCCTTCTTATAC 13693 | ||| || || | ||| | ||| || | ||||| || ||||| | || |||||||| Sbjct 811697 ATATCCTTCGACAGATCAATCTCTTCGGCCGTCCAGAACGAAGCCTCTGCTCTCTTATAC 811756 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430982105854512