Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F002214845.1_202017-07-
05] 56 sequences; 9,683,383 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq4 214 4e-50
seq6 150 4e-31
seq8 120 7e-22
seq2 120 7e-22
>seq4
Length=1065440
Score = 214 bits (236), Expect = 4e-50
Identities = 384/550 (70%), Gaps = 12/550 (2%)
Strand=Plus/Minus
Query 268760 GCTTCTTTTTGGACTGTAGAAGAAGTAGATCTGTCTTATGAC-TTAATAGATTGGAAAAA 268818
||||| || ||||| | ||||| | |||||||| | || || || |||||||| ||
Sbjct 811740 GCTTCGTTCTGGACGGCCGAAGAGATTGATCTGTCGAAGGATATTCAT-GATTGGAATAA 811682
Query 268819 TTTAA--AACCAGAA-GAAAGAAGATTTATATCTTATATTCTTGCGTTTTTTGCAGTTAG 268875
| || |||| |||||| || || || | | | || || ||||| |
Sbjct 811681 CCGTATGAATGAGAACGAAAGATTTTTCATCTCCCGTGTCTTGGCCTTCTTTGCTGCCTC 811622
Query 268876 TGATGGTATCGTTAACGAAAATCTAGTAGAGAAGTTCTGTCAAGAGGTACAGATTCCTGA 268935
||||||||| || || || ||| |||| ||||| ||| || ||| || || ||||| ||
Sbjct 811621 TGATGGTATAGTAAATGAGAATTTAGTTGAGAATTTCAGTGCAGAAGTGCAAATTCCAGA 811562
Query 268936 AGCCAGATGTTTTTACGGATTCCAGATAGCTATAGAAAATATTCATTCAGAGATGTACAG 268995
||| | |||||| || || ||||| || || ||||| ||||| ||||||| ||
Sbjct 811561 AGCTAAATGTTTCTATGGTTTCCAAATCATGATGGAAAACATTCACTCAGAGACCTATTC 811502
Query 268996 TCTATTAATAGATACTTATATAGATGATAACAACGAAAAGAAAAGACT-ATTTTCTTCTA 269054
|| ||||| ||||||||||| | ||| ||| | |||| | || ||| | | |
Sbjct 811501 CCTGTTAATTGATACTTATATCAAGGATC-CAAAGGAAAGCGATTTCTTATTCAATGCGA 811443
Query 269055 T-GAGAACTATGGACTGTGTGAGaaaaaaaTCTGAATGGGCTCTGAAATGGATAAACGAT 269113
| || ||| | | | | | | | || | ||||||||| | | |||||| | ||
Sbjct 811442 TTGAAAACATTCCTCAGATTAA-AGAGAAGGCCGAATGGGCTATCAGATGGATTCAGGAC 811384
Query 269114 AGCGCGCCT---TACGGAGAAAGGTTAGTTGCTTTTGCCGCTGTAGAAGGTATATTCTTT 269170
|| | || | || ||| || || |||||||| || || | |||||||| ||||||
Sbjct 811383 AGTGAATCTATCTTCGCAGAGAGATTGGTTGCTTTCGCTGCCATTGAAGGTATTTTCTTT 811324
Query 269171 TCGGGGTCTTTTGCCGCTATCTTTTGGTTGAAGAAAAGAGGCCTTATGCCAGGATTAACT 269230
|| || || ||||| |||||||| ||||||||||| | ||| || |||||||| ||||
Sbjct 811323 TCAGGTTCCTTTGCTGCTATCTTCTGGTTGAAGAAGAAAGGTCTAATGCCAGGTCTAACG 811264
Query 269231 TTCTCTAACGAATTGATAAGCAGGGACGAAGGTTTACACTGCGACTTCGCTTGTTTATTA 269290
|| |||||||||||||| |||| || ||||||||||| ||| || || ||| || ||
Sbjct 811263 TTTTCTAACGAATTGATCTGCAGAGATGAAGGTTTACATACCGATTTTGCATGTCTACTA 811204
Query 269291 TTTACTAATT 269300
||| || |||
Sbjct 811203 TTTGCTCATT 811194
>seq6
Length=935435
Score = 150 bits (166), Expect = 4e-31
Identities = 161/210 (77%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 104351 ACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCT 104410
|||||||| || |||||||| ||||| || || || || ||||||||||| || ||||||
Sbjct 586970 ACTAGATGCAAAGTAGATTCCTTCTGGATGTTGTAATCGGATAGAGTTCTTCCATCTTCT 587029
Query 104411 AGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGA 104470
||||| || || || || || | || ||||| ||||| || || ||||||||||| |||
Sbjct 587030 AGTTGCTTACCTGCGAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCTTTATCTTGA 587089
Query 104471 ATCTTTGCT-TTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTT 104529
||| ||||| || ||||| || | ||||| | || ||||| || || || || ||
Sbjct 587090 ATC-TTGCTCTTGACATTGTCAATAGTATCAGAGGACTCAACCTCCAGGGTGATGGTTTT 587148
Query 104530 ACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|||||| | || || ||||| ||||||||
Sbjct 587149 ACCAGTTAAAGTCTTGACAAAAATCTGCAT 587178
Score = 147 bits (162), Expect = 5e-30
Identities = 160/210 (76%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 104351 ACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCT 104410
|||||||| || |||||||| ||||| || || || || ||||||||||| || ||||||
Sbjct 586058 ACTAGATGCAAAGTAGATTCCTTCTGGATGTTGTAATCGGATAGAGTTCTTCCATCTTCT 586117
Query 104411 AGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGA 104470
||||| || || || || || | || ||||| ||||| || || ||||||||||| |||
Sbjct 586118 AGTTGCTTACCTGCGAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCTTTATCTTGA 586177
Query 104471 ATCTTTGCT-TTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTT 104529
||| ||||| || ||||| || | ||||| | || ||||| || || || || ||
Sbjct 586178 ATC-TTGCTCTTGACATTGTCAATAGTATCAGAGGACTCAACCTCCAGGGTGATGGTTTT 586236
Query 104530 ACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|||||| | || || || || ||||||||
Sbjct 586237 ACCAGTTAAAGTCTTGACGAAGATCTGCAT 586266
Score = 147 bits (162), Expect = 5e-30
Identities = 160/210 (76%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 104351 ACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCT 104410
|||||||| || |||||||| ||||| || || || || ||||||||||| || ||||||
Sbjct 586286 ACTAGATGCAAAGTAGATTCCTTCTGGATGTTGTAATCGGATAGAGTTCTTCCATCTTCT 586345
Query 104411 AGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGA 104470
||||| || || || || || | || ||||| ||||| || || ||||||||||| |||
Sbjct 586346 AGTTGCTTACCTGCGAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCTTTATCTTGA 586405
Query 104471 ATCTTTGCT-TTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTT 104529
||| ||||| || ||||| || | ||||| | || ||||| || || || || ||
Sbjct 586406 ATC-TTGCTCTTGACATTGTCAATAGTATCAGAGGACTCAACCTCCAGGGTGATGGTTTT 586464
Query 104530 ACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|||||| | || || || || ||||||||
Sbjct 586465 ACCAGTTAAAGTCTTGACGAAGATCTGCAT 586494
Score = 147 bits (162), Expect = 5e-30
Identities = 160/210 (76%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 104351 ACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCT 104410
|||||||| || |||||||| ||||| || || || || ||||||||||| || ||||||
Sbjct 586514 ACTAGATGCAAAGTAGATTCCTTCTGGATGTTGTAATCGGATAGAGTTCTTCCATCTTCT 586573
Query 104411 AGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGA 104470
||||| || || || || || | || ||||| ||||| || || ||||||||||| |||
Sbjct 586574 AGTTGCTTACCTGCGAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCTTTATCTTGA 586633
Query 104471 ATCTTTGCT-TTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTT 104529
||| ||||| || ||||| || | ||||| | || ||||| || || || || ||
Sbjct 586634 ATC-TTGCTCTTGACATTGTCAATAGTATCAGAGGACTCAACCTCCAGGGTGATGGTTTT 586692
Query 104530 ACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|||||| | || || || || ||||||||
Sbjct 586693 ACCAGTTAAAGTCTTGACGAAGATCTGCAT 586722
Score = 147 bits (162), Expect = 5e-30
Identities = 160/210 (76%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 104351 ACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCT 104410
|||||||| || |||||||| ||||| || || || || ||||||||||| || ||||||
Sbjct 586742 ACTAGATGCAAAGTAGATTCCTTCTGGATGTTGTAATCGGATAGAGTTCTTCCATCTTCT 586801
Query 104411 AGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGA 104470
||||| || || || || || | || ||||| ||||| || || ||||||||||| |||
Sbjct 586802 AGTTGCTTACCTGCGAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCTTTATCTTGA 586861
Query 104471 ATCTTTGCT-TTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTT 104529
||| ||||| || ||||| || | ||||| | || ||||| || || || || ||
Sbjct 586862 ATC-TTGCTCTTGACATTGTCAATAGTATCAGAGGACTCAACCTCCAGGGTGATGGTTTT 586920
Query 104530 ACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|||||| | || || || || ||||||||
Sbjct 586921 ACCAGTTAAAGTCTTGACGAAGATCTGCAT 586950
Score = 141 bits (156), Expect = 2e-28
Identities = 159/210 (76%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 104351 ACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCT 104410
|| ||||| || |||||||| ||||| || || || || ||||||||||| || ||||||
Sbjct 585602 ACCAGATGCAAAGTAGATTCCTTCTGGATGTTGTAATCGGATAGAGTTCTTCCATCTTCT 585661
Query 104411 AGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGA 104470
||||| || || || || || | || ||||| ||||| || || ||||||||||| |||
Sbjct 585662 AGTTGCTTACCTGCGAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCTTTATCTTGA 585721
Query 104471 ATCTTTGCT-TTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTT 104529
||| ||||| || ||||| || | ||||| | || ||||| || || || || ||
Sbjct 585722 ATC-TTGCTCTTGACATTGTCAATAGTATCAGAGGACTCAACCTCCAGGGTGATGGTTTT 585780
Query 104530 ACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|||||| | || || || || ||||||||
Sbjct 585781 ACCAGTTAAAGTCTTGACGAAGATCTGCAT 585810
Score = 141 bits (156), Expect = 2e-28
Identities = 159/210 (76%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 104351 ACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCT 104410
|| ||||| || |||||||| ||||| || || || || ||||||||||| || ||||||
Sbjct 585830 ACCAGATGCAAAGTAGATTCCTTCTGGATGTTGTAATCGGATAGAGTTCTTCCATCTTCT 585889
Query 104411 AGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGA 104470
||||| || || || || || | || ||||| ||||| || || ||||||||||| |||
Sbjct 585890 AGTTGCTTACCTGCGAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCTTTATCTTGA 585949
Query 104471 ATCTTTGCT-TTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTT 104529
||| ||||| || ||||| || | ||||| | || ||||| || || || || ||
Sbjct 585950 ATC-TTGCTCTTGACATTGTCAATAGTATCAGAGGACTCAACCTCCAGGGTGATGGTTTT 586008
Query 104530 ACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|||||| | || || || || ||||||||
Sbjct 586009 ACCAGTTAAAGTCTTGACGAAGATCTGCAT 586038
>seq8
Length=676247
Score = 120 bits (132), Expect = 7e-22
Identities = 165/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 104333 CCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGAT 104392
|| ||||| | || || || | || || || ||||| || || || || ||||||||
Sbjct 115819 CCACCTCTCAATCTTAGGACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCAGAC 115878
Query 104393 AGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGT 104452
| ||||||||| ||||| | ||| || |||||||| || | || ||||| ||||| ||
Sbjct 115879 AAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 115938
Query 104453 ATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACC 104512
|| || || || || || ||||| | || ||||| || | || || || ||| ||
Sbjct 115939 ATACCCTCCTTGTCTTGGATCTTAGACTTGACATTGTCAATAGTGTCAGAAGATTCGACT 115998
Query 104513 TCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTTG 104563
|| | |||||||||||||| || | || || || || || ||||| |||
Sbjct 115999 TCCAAGGTAATAGTCTTACCGGTCAAAGTCTTGACGAAAATTTGCATCTTG 116049
>seq2
Length=1385486
Score = 120 bits (132), Expect = 7e-22
Identities = 150/206 (73%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || ||||| | || || || | |||| || ||||| || || || || |||||
Sbjct 975406 ATACCACCTCTCAATCTTAGAACCAAGTGTAGAGTGGATTCCTTTTGGATGTTGTAGTCG 975465
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|| | ||||||||||||||| | ||| || |||||||| || | || ||||| |||||
Sbjct 975466 GACAAAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGT 975525
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || ||||| || || |||||||||| || ||||| || | || || || |||
Sbjct 975526 GGGATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCA 975585
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGT 104535
|| || | || || |||||||||||
Sbjct 975586 ACTTCCAAAGTGATGGTCTTACCAGT 975611
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151397573871648
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