Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F002214845.1_202017-07- 05] 56 sequences; 9,683,383 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq6 141 1e-29 seq3 129 9e-26 >seq6 Length=935435 Score = 141 bits (156), Expect = 1e-29 Identities = 193/267 (72%), Gaps = 2/267 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || ||||||||| | | |||| ||| |||||||||| ||||| ||||||||||||||||| Sbjct 484273 GCCAAGCGTCATAGAAAGATC-CTTAGAGATAACATTCAAGGTATCACCAAGCCAGCTAT 484215 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 | | | ||||| | | ||||| ||||||||| | || || ||| | || ||||| | Sbjct 484214 CAGAAGATTGGCTAGAAGAGGTGGTGTCAAGCGTATATCCGGTTTGATTTACGAAGAAGT 484155 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 | | | ||| ||||||| ||| | | | ||||| |||||| || || || || Sbjct 484154 TAGAGCTGTCTTGAAGACTTTCTTGGAATCTGTTATTAGAGATGCTGTCACTTACACAGA 484095 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||||| | ||||||||||| || | ||| | || ||||| ||||| | ||||| Sbjct 484094 ACACGCTAAGAGAAAGACTGTCACTTCTCTTGATGTTGTGTATGCTTTGAAGAGACAAGG 484035 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTA 16698 | | | |||||||| || |||| Sbjct 484034 TAGAACCTTGTATGGTTTCGGTGGTTA 484008 >seq3 Length=1227772 Score = 129 bits (142), Expect = 9e-26 Identities = 191/268 (71%), Gaps = 2/268 (1%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| | | ||| |||| |||||||||| ||||| ||||| ||||||||||| Sbjct 433100 GCCAAGCGTCACAGAAAGAT-TCTTAGAGATAACATTCAAGGTATCACTAAGCCAGCTAT 433158 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 | | | ||||| | | ||||| ||||||||| | || || ||| | || ||||| | Sbjct 433159 CAGAAGATTGGCTAGAAGAGGTGGTGTCAAGCGTATATCCGGTTTGATTTACGAAGAAGT 433218 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 | | |||| | |||| ||||| || |||| ||| |||||| | || || || Sbjct 433219 CAGAGCTGTTCTAAAGACTTTCCTTGAGTCCGTCATCAGAGATGCTGTTACTTACACGGA 433278 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 ||||| || | ||||| || || || ||||| | |||||||| ||||| | ||||| Sbjct 433279 ACACGCCAAGAGAAAGACCGTTACTTCTTTGGATGTTGTCTATGCCTTGAAGAGACAAGG 433338 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699 | | | |||||||| || ||||| Sbjct 433339 TAGAACCTTGTATGGTTTCGGTGGTTAA 433366 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075148798808