Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F002214845.1_202017-07-
05] 56 sequences; 9,683,383 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq6 141 1e-29
seq3 129 9e-26
>seq6
Length=935435
Score = 141 bits (156), Expect = 1e-29
Identities = 193/267 (72%), Gaps = 2/267 (1%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| ||||||||| | | |||| ||| |||||||||| ||||| |||||||||||||||||
Sbjct 484273 GCCAAGCGTCATAGAAAGATC-CTTAGAGATAACATTCAAGGTATCACCAAGCCAGCTAT 484215
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
| | | ||||| | | ||||| ||||||||| | || || ||| | || ||||| |
Sbjct 484214 CAGAAGATTGGCTAGAAGAGGTGGTGTCAAGCGTATATCCGGTTTGATTTACGAAGAAGT 484155
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
| | | ||| ||||||| ||| | | | ||||| |||||| || || || ||
Sbjct 484154 TAGAGCTGTCTTGAAGACTTTCTTGGAATCTGTTATTAGAGATGCTGTCACTTACACAGA 484095
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
|||||||| | ||||||||||| || | ||| | || ||||| ||||| | |||||
Sbjct 484094 ACACGCTAAGAGAAAGACTGTCACTTCTCTTGATGTTGTGTATGCTTTGAAGAGACAAGG 484035
Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTA 16698
| | | |||||||| || ||||
Sbjct 484034 TAGAACCTTGTATGGTTTCGGTGGTTA 484008
>seq3
Length=1227772
Score = 129 bits (142), Expect = 9e-26
Identities = 191/268 (71%), Gaps = 2/268 (1%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| |||||||| | | ||| |||| |||||||||| ||||| ||||| |||||||||||
Sbjct 433100 GCCAAGCGTCACAGAAAGAT-TCTTAGAGATAACATTCAAGGTATCACTAAGCCAGCTAT 433158
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
| | | ||||| | | ||||| ||||||||| | || || ||| | || ||||| |
Sbjct 433159 CAGAAGATTGGCTAGAAGAGGTGGTGTCAAGCGTATATCCGGTTTGATTTACGAAGAAGT 433218
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
| | |||| | |||| ||||| || |||| ||| |||||| | || || ||
Sbjct 433219 CAGAGCTGTTCTAAAGACTTTCCTTGAGTCCGTCATCAGAGATGCTGTTACTTACACGGA 433278
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
||||| || | ||||| || || || ||||| | |||||||| ||||| | |||||
Sbjct 433279 ACACGCCAAGAGAAAGACCGTTACTTCTTTGGATGTTGTCTATGCCTTGAAGAGACAAGG 433338
Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699
| | | |||||||| || |||||
Sbjct 433339 TAGAACCTTGTATGGTTTCGGTGGTTAA 433366
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79075148798808
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |