Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F002214845.1_202017-07- 05] 56 sequences; 9,683,383 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq4 165 9e-36 >seq4 Length=1065440 Score = 165 bits (182), Expect = 9e-36 Identities = 561/870 (64%), Gaps = 11/870 (1%) Strand=Plus/Plus Query 21200 ACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCCAATGATATAGATTCCATAAAATCAAAT 21259 ||||| |||||||||||||| ||||| || ||| || || ||||| ||||||||| Sbjct 810935 ACTCTCTTTTCGAAAAAATTGGTCTTACCAGCCAGCGAGATGTTCTCCATGAAATCAAAT 810994 Query 21260 GGATTT-TCAGATTTAAATATTTTATTACAACCCAGTTCTGATAATAATCTATCTGCTAC 21318 || || ||| || ||| |||| || || | | | || |||||| || || Sbjct 810995 GGGTTAGTCACGTTGAAAAATTTC-TTGTTCCCGAAAGCGACCAGTAGTCTATCAGCGAC 811053 Query 21319 AAATTCTATATATTGACACATTAATTCACAATTCATACCGATCAATTTTACAGGAAGAGC 21378 || || | || || ||| | || |||||||| | || || || ||||| Sbjct 811054 GAACTCAACGTACTGGTTCATCAGGTCGGCGTTCATACCCAATAAAGAAACGGGTAGAGC 811113 Query 21379 TTTTGTCAAAAAAGATTTTTCTATAGAGACGGCTTCAACAATTATATTTATTATCCTAGA 21438 | | || | ||||| || |||||||||| ||| || ||| || | || Sbjct 811114 ATCGATGAAGTACCTCTTTTCGATCTCGACGGCTTCAGTAATAATCTTTTCGATAATGGA 811173 Query 21439 TGTACTAGGGGGATACAATAATTGTTTAAACATCAAACATGCAAAATCACAATGCAAACC 21498 | | || || | || || ||| | | |||||||||||| ||| ||||| Sbjct 811174 AGGATCTGGCTTATTCTTCAAATGAGCAAATAGTAGACATGCAAAATCGGTATGTAAACC 811233 Query 21499 TTCATCCCTACTTATTAATTCATTAGAAAATGTTAAACCGGGCATTAATCCTCTCTTTTT 21558 |||||| || | || ||||| |||||||| |||| ||| ||||||| ||| |||| || Sbjct 811234 TTCATCTCTGCAGATCAATTCGTTAGAAAACGTTAGACCTGGCATTAGACCTTTCTTCTT 811293 Query 21559 TAACCAAAATATTGACGCAAATGCTCCTGAAAAGAAAATGCCCTCAACGGCAGCAAATGC 21618 ||||| || || | ||||| | |||||||||||||| || |||| |||||| || || Sbjct 811294 CAACCAGAAGATAGCAGCAAAGGAACCTGAAAAGAAAATACCTTCAATGGCAGCGAAAGC 811353 Query 21619 AACTAATCGTTCACCGTATGTAGATTCTTTATCCAATATCCATTTTTCTGCCCATTTTGC 21678 ||| |||| || || | ||||||| | ||| |||||| | ||||||| || Sbjct 811354 AACCAATCTCTCTGCGAAGATAGATTCACTGTCCTGAATCCATCTGATAGCCCATTCGGC 811413 Query 21679 CTTTTCTTTAATACAATCAATTGTATCAATAGCTTTTAA-AAGATGAtttttttCATCTA 21737 ||| |||||||| | ||| | ||||| || || || |||| || |||| | | Sbjct 811414 CTTCTCTTTAATCTGAGGAATGTTTTCAATCGCATTGAATAAGA-AATCGCTTTCCTTTG 811472 Query 21738 CATCGGTTATGNNNNNNNNNNNNNNNNNACTATACATTTCAGAATGTATATTTTCTATCG 21797 ||| | || ||| | || || || || ||||| ||| Sbjct 811473 GATCCTTGATATAAGTATCAATTAACAGGGAATAGGTCTCTGAGTGAATGTTTTCCATCA 811532 Query 21798 CTATCTGAAATCCGTAAAAACATCTTGCCTCTGAACATTGAACCTC-GGAATAAAATCGT 21856 || || || || || |||||| | || |||| | ||| || || | | | |||| Sbjct 811533 TGATTTGGAAACCATAGAAACATTTAGCTTCTGGAATTTGCACTTCTGCACTGAAAT-TC 811591 Query 21857 TGAGCCAAGTTTTCATTTACTATTCCATCACTGGCGGCAAAAAATGCCAATATATTTTTT 21916 | | | || || ||||||||||| |||||| ||| ||||| || ||||| | | Sbjct 811592 TCAACTAAATTCTCATTTACTATACCATCAGAGGCAGCAAAGAAGGCCAAGACACGGGAG 811651 Query 21917 ATAAAATATCGTTCGTTATCTGTTAAT----TTTTTCCAATCTAATAAATCTTTTGATAA 21972 || ||| ||| |||||| || || || || |||||||| | ||| || || | Sbjct 811652 ATGAAAAATCTTTCGTTCTC-ATTCATACGGTTATTCCAATCATGAATATCCTTCGACAG 811710 Query 21973 ATCTACTTCTTCAGTTGTCCAAAAGCTAGCAATAGCCTTTTTATACATAATCCAGATATC 22032 ||| | ||||| | ||||| || ||| || | |||||| ||| || || Sbjct 811711 ATCAATCTCTTCGGCCGTCCAGAACGAAGCCTCTGCTCTCTTATACGCTTGCCAAATCTC 811770 Query 22033 ATTATATATTATTGGAAATATTACAAACCT 22062 || ||| | ||||| |||| ||||| || Sbjct 811771 ATGGTATTTGATTGGGAATAGAACAAATCT 811800 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531900427669440