Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F002214845.1_202017-07-
05] 56 sequences; 9,683,383 total letters
Query= NC_006966.1
Length=166259
Score E
Sequences producing significant alignments: (Bits) Value
seq4 165 9e-36
>seq4
Length=1065440
Score = 165 bits (182), Expect = 9e-36
Identities = 561/870 (64%), Gaps = 11/870 (1%)
Strand=Plus/Plus
Query 21200 ACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCCAATGATATAGATTCCATAAAATCAAAT 21259
||||| |||||||||||||| ||||| || ||| || || ||||| |||||||||
Sbjct 810935 ACTCTCTTTTCGAAAAAATTGGTCTTACCAGCCAGCGAGATGTTCTCCATGAAATCAAAT 810994
Query 21260 GGATTT-TCAGATTTAAATATTTTATTACAACCCAGTTCTGATAATAATCTATCTGCTAC 21318
|| || ||| || ||| |||| || || | | | || |||||| || ||
Sbjct 810995 GGGTTAGTCACGTTGAAAAATTTC-TTGTTCCCGAAAGCGACCAGTAGTCTATCAGCGAC 811053
Query 21319 AAATTCTATATATTGACACATTAATTCACAATTCATACCGATCAATTTTACAGGAAGAGC 21378
|| || | || || ||| | || |||||||| | || || || |||||
Sbjct 811054 GAACTCAACGTACTGGTTCATCAGGTCGGCGTTCATACCCAATAAAGAAACGGGTAGAGC 811113
Query 21379 TTTTGTCAAAAAAGATTTTTCTATAGAGACGGCTTCAACAATTATATTTATTATCCTAGA 21438
| | || | ||||| || |||||||||| ||| || ||| || | ||
Sbjct 811114 ATCGATGAAGTACCTCTTTTCGATCTCGACGGCTTCAGTAATAATCTTTTCGATAATGGA 811173
Query 21439 TGTACTAGGGGGATACAATAATTGTTTAAACATCAAACATGCAAAATCACAATGCAAACC 21498
| | || || | || || ||| | | |||||||||||| ||| |||||
Sbjct 811174 AGGATCTGGCTTATTCTTCAAATGAGCAAATAGTAGACATGCAAAATCGGTATGTAAACC 811233
Query 21499 TTCATCCCTACTTATTAATTCATTAGAAAATGTTAAACCGGGCATTAATCCTCTCTTTTT 21558
|||||| || | || ||||| |||||||| |||| ||| ||||||| ||| |||| ||
Sbjct 811234 TTCATCTCTGCAGATCAATTCGTTAGAAAACGTTAGACCTGGCATTAGACCTTTCTTCTT 811293
Query 21559 TAACCAAAATATTGACGCAAATGCTCCTGAAAAGAAAATGCCCTCAACGGCAGCAAATGC 21618
||||| || || | ||||| | |||||||||||||| || |||| |||||| || ||
Sbjct 811294 CAACCAGAAGATAGCAGCAAAGGAACCTGAAAAGAAAATACCTTCAATGGCAGCGAAAGC 811353
Query 21619 AACTAATCGTTCACCGTATGTAGATTCTTTATCCAATATCCATTTTTCTGCCCATTTTGC 21678
||| |||| || || | ||||||| | ||| |||||| | ||||||| ||
Sbjct 811354 AACCAATCTCTCTGCGAAGATAGATTCACTGTCCTGAATCCATCTGATAGCCCATTCGGC 811413
Query 21679 CTTTTCTTTAATACAATCAATTGTATCAATAGCTTTTAA-AAGATGAtttttttCATCTA 21737
||| |||||||| | ||| | ||||| || || || |||| || |||| | |
Sbjct 811414 CTTCTCTTTAATCTGAGGAATGTTTTCAATCGCATTGAATAAGA-AATCGCTTTCCTTTG 811472
Query 21738 CATCGGTTATGNNNNNNNNNNNNNNNNNACTATACATTTCAGAATGTATATTTTCTATCG 21797
||| | || ||| | || || || || ||||| |||
Sbjct 811473 GATCCTTGATATAAGTATCAATTAACAGGGAATAGGTCTCTGAGTGAATGTTTTCCATCA 811532
Query 21798 CTATCTGAAATCCGTAAAAACATCTTGCCTCTGAACATTGAACCTC-GGAATAAAATCGT 21856
|| || || || || |||||| | || |||| | ||| || || | | | ||||
Sbjct 811533 TGATTTGGAAACCATAGAAACATTTAGCTTCTGGAATTTGCACTTCTGCACTGAAAT-TC 811591
Query 21857 TGAGCCAAGTTTTCATTTACTATTCCATCACTGGCGGCAAAAAATGCCAATATATTTTTT 21916
| | | || || ||||||||||| |||||| ||| ||||| || ||||| | |
Sbjct 811592 TCAACTAAATTCTCATTTACTATACCATCAGAGGCAGCAAAGAAGGCCAAGACACGGGAG 811651
Query 21917 ATAAAATATCGTTCGTTATCTGTTAAT----TTTTTCCAATCTAATAAATCTTTTGATAA 21972
|| ||| ||| |||||| || || || || |||||||| | ||| || || |
Sbjct 811652 ATGAAAAATCTTTCGTTCTC-ATTCATACGGTTATTCCAATCATGAATATCCTTCGACAG 811710
Query 21973 ATCTACTTCTTCAGTTGTCCAAAAGCTAGCAATAGCCTTTTTATACATAATCCAGATATC 22032
||| | ||||| | ||||| || ||| || | |||||| ||| || ||
Sbjct 811711 ATCAATCTCTTCGGCCGTCCAGAACGAAGCCTCTGCTCTCTTATACGCTTGCCAAATCTC 811770
Query 22033 ATTATATATTATTGGAAATATTACAAACCT 22062
|| ||| | ||||| |||| ||||| ||
Sbjct 811771 ATGGTATTTGATTGGGAATAGAACAAATCT 811800
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 531900427669440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |