Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F002214845.1_202017-07- 05] 56 sequences; 9,683,383 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq7 363 2e-95 seq4 251 9e-62 >seq7 Length=810710 Score = 363 bits (402), Expect = 2e-95 Identities = 1438/2258 (64%), Gaps = 37/2258 (2%) Strand=Plus/Plus Query 61985 CTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCC 62044 |||||| | ||||||||||| | ||| || |||| || || | || |||||||| || Sbjct 326295 CTTGTCAATGGTGAATTGAATAGCAGCAGAAGCGGCTTGTGTCCTCAGGTAGTACATACC 326354 Query 62045 CGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGG 62104 || || | ||| |||| ||||| ||||||||||| || | ||| | | || Sbjct 326355 AGTCTTCAAACCCTTCTTCCAACCGTAGAAATGCATACTAGTCAATTTACCCATAGTTGG 326414 Query 62105 ATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGC 62164 | | || || || |||| ||||| ||||||||| | | | | || || || Sbjct 326415 AGCACGGATGTGAATGTTCAATGATTGGGACTGATCGATGTAAACAGCACGATCAGCTGC 326474 Query 62165 CATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATAT 62223 ||| | ||||| || ||||| | |||||||||| ||| || || || || ||| | | Sbjct 326475 CATCTCGATGATAGTTTTTTGAGAGATTTCCCAAACAGTCTTGTACAAATCCTTTAGT-T 326533 Query 62224 CTTCTGGAAGGTTTGT---ATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGA 62280 ||| |||| || | ||| || ||||| ||| ||| | || || | ||| | Sbjct 326534 CTTGAGGAATATTCGGTAGATTTTGGATGGAGCCATTATCAGTGATGATGTGTTGCTTCA 326593 Query 62281 TCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTT 62340 | ||||| ||| | | ||| ||| | | || | | || || || | || Sbjct 326594 TACTATCATCCCAGATACCTAGGTCGACCAAATCACGTAGCAAGTAAGGGTTGACAATTT 326653 Query 62341 GAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACT 62400 | ||||| || || || || | |||| ||| ||||| || || || || | ||| Sbjct 326654 GGAATTCACCGGATAACACACGACGAGAGTACATATTGGAAGTGTATGGCTCGAAACACT 326713 Query 62401 CATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTAT 62460 | || | || | ||| || | ||| || ||||| ||||| || |||| | ||| | Sbjct 326714 CGTTGTAACCTAGAATCTGGGAAGTCGACGCAGTTGGCATTGGGGCCAATAGCAAAGAGT 326773 Query 62461 TTCTAAGACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACG 62520 |||||| ||| ||| |||| | | || | || ||||||| ||| |||||||| | Sbjct 326774 TTCTAACACCATATTCCTTGATGCTTTTCTTCAAAGTGTCCCAATCCCATAGATCCGATG 326833 Query 62521 GTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATG 62580 || || | |||||| | | | || ||| |||| | Sbjct 326834 GTTTGGTGTTCCACAGATCGTACTGCAAAATACCTTGAGAGATTGGAGAACCTTCATAAG 326893 Query 62581 TATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAA 62640 | ||| ||||| ||||||| || | ||||| || || || | | ||| || | Sbjct 326894 TGGAGTAAGGTCCATCCTTCTTCGCCAACTCACAGGAGGCTTCCAAAGAAGCGTGGTAGA 326953 Query 62641 TGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTTA 62700 | ||||||||||| | | |||||||| | ||||| | ||||||||| | | Sbjct 326954 TAGTTTCGAAGATTTGGATGTTTAGATCCTTGGCTTCTTGAGACTCAAATGGAACACGCA 327013 Query 62701 AGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTAT 62760 | | |||||| |||| || || || | ||||| | | | |||||||| | |||| ||| Sbjct 327014 ACATCATAAACACGTCAGCCAAACCATTGACACCTAGAGCCATAGGTCTGTTTCTCATAT 327073 Query 62761 TAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTC 62820 ||||| || |||||| |||| || || || || ||| || | || || | || | Sbjct 327074 TAGAGTTTCTAGCTTCAGGAACTGGGTAGTAGTTTCGATCGATGACCTTGTTCAAGTTAC 327133 Query 62821 TGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGC---------CCAT 62871 || || ||| | | | | || ||| ||||||| | | | |||| Sbjct 327134 GAGTGATAACCTTGGCAATTTTATGCAACTTGGCAAAATCATACCACTGGGTCTTACCAT 327193 Query 62872 CTATTACAAACATG--TTCAAG--------GCAACAGATGCCAGATTACAAACGGCTACC 62921 | || | ||| || | || | || | || |||| ||||||||||| | Sbjct 327194 C-ATCAGCAACTTGAATACACGATGGTAAAGCGATGGAGGCCAAGTTACAAACGGCAGTC 327252 Query 62922 TCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCT 62981 |||| || | | || | | || ||| || | ||| | || || || || Sbjct 327253 TCATCAGGTGCTGAGTACTCAACGATTTCACAACACAAGTTAGAGGATTTAATGGTACCC 327312 Query 62982 AAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCA 63041 || || | ||| || |||||| | ||||| ||||| || ||||| ||||||||||||||| Sbjct 327313 AAGTTCTTTTGGTTGCTCTTTATATTACAGGCATCTTTGTAAAGCATGAATGGAGTACCA 327372 Query 63042 GTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTG 63101 || || | |||||||| | || || | ||| | | |||| || || | ||| Sbjct 327373 GTCTCTGTTTGAGATTCCAAGATAGCGTACCACAGTTTTTGAGCTTTGATAGTC--TTTC 327430 Query 63102 TATCTC--CTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACAT 63159 || | | | ||| |||| || |||||| ||| || || || || |||||| Sbjct 327431 TACCACGACCTTCAGCGACGTAACGTTCATACAAGGCTTCAAATTCATCACCATAAACAT 327490 Query 63160 TGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTC 63219 ||| || ||| |||| ||| | | ||| | ||| || || | || | || | Sbjct 327491 CAGACAAACCTGGAGCTTCACTTGGAGAGAACAAAGTCCATTCACCATTCTCTTGAACAC 327550 Query 63220 GTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCT 63279 ||||||| || | ||| |||||||| || ||| || | |||||| | | | || | Sbjct 327551 GTTTCATGAACAAATCTGGAATCCAGAGGGCTGGGAACAAATCTCTTGCACGAATCTCTT 327610 Query 63280 CGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCA 63339 | || || ||||| | ||| | ||| | | || || | ||||| ||||||| Sbjct 327611 CCTTACCGTGGTTCTTCCGGATATCTATGAAATCAAAGATGTCTGCGTGCCATGGTTCCA 327670 Query 63340 AGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGT 63399 |||| | || | | | || |||| |||||| || || ||||| | || | ||| |||| Sbjct 327671 AGTACAAAGCGAAAGCACCTGGCCTTTTGTTACCACCTTGATCCACATAACGAGCAGTGT 327730 Query 63400 TATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATAT 63459 | || | || | | ||| || || | ||||| || |||| || ||||| | |||| Sbjct 327731 TGTTGAAGACACGTACCATGGGGATCAACCCGTTCGAAGTACCGTTAGTACCTGCAATAT 327790 Query 63460 AGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGA 63519 | || | | |||||| || || | ||| || || || || | ||||| | Sbjct 327791 ATGAACCCGTAGAACGAATGTTGTGTATGTGCAAACCAATACCACCAGCGGTCTTAGAAA 327850 Query 63520 TTAATGCGCATCGTTTTAACGTGTCATAGATACCCTCTATGCTATCATCGATCATGTTAA 63579 | | || ||| || || || || || |||||||| ||| ||||| ||||| | Sbjct 327851 TCATAGCACATTCCTTCAAAGTATCGTAAATACCCTCGATGGAGTCATCCTTCATGGCGA 327910 Query 63580 GTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAG 63639 ||| ||||| |||||| || | || ||| || ||||| || | || ||||||| Sbjct 327911 TTAGGAAACATGAAGACATCTGAGGGCGTGGAGTACCAGCATTGAAAAGAGTTGGAGAAG 327970 Query 63640 CGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCC 63699 | || | || || | || | ||||| || ||||||||||| || || || || Sbjct 327971 CATGAATGAAGTATCTCAAGGACATCAGATTATAAGTCTCAATAGCAGACTCGATGTCGT 328030 Query 63700 ATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGT 63759 |||||| || || || || | ||| | ||| || ||||| | |||| ||| | Sbjct 328031 CACCATGAATACCAACAGCAACTCTCATAATCATATGTTGAGGACGTTCAGCGACTTCAC 328090 Query 63760 TGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGA 63817 ||||| ||| || || || |||| |||||| || ||||||||||| | ||| Sbjct 328091 CATTTATCCTCAGCAGATAAGAACGCTCCAGAGTTTTGAACCCAAAATAGTTAAAGTTGA 328150 Query 63818 AAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTATATC 63877 || |||| || |||| |||| | ||||| | | |||||||| |||||| || || || Sbjct 328151 AA--TCTCTATCATAAACAATAGCAGAGTTCAACTCATCCTTATGTTTGTTGACGATGTC 328208 Query 63878 CAT--GGTGATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTG 63935 ||| | | | || || || |||||||| ||| || || || || ||||||||| Sbjct 328209 CATAACCTCTTGC--GAGATCATAGGAGAATGAACCCCGTTCTTTGGGTTCACATAGTTG 328266 Query 63936 AATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACG 63995 || || || || || | | ||| |||| | || | |||||| | ||| || | Sbjct 328267 AACAATTCACTCACAACCTGAGAAAACTGTTTAGTAGTCTGCTTGTGCAAATTAGAGATA 328326 Query 63996 GCTATTCTGGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATT 64055 |||||||| ||||| | | | |||||||| ||||| || || | || || Sbjct 328327 GCTATTCTAGCGGCCAAAGTAGCATAATCAGGATGCACAGTCGTCATATACGCACAAGTT 328386 Query 64056 TCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTTGAATAACC 64115 || || |||| | |||||||||| || || || || || | ||| | || ||| | Sbjct 328387 TCAGCAGCCAAATTGTCCAATTCAACAGTAGTCACACCTTCATAGACACCAGAAATGATA 328446 Query 64116 TTCATAGCTATTTTAATAGGATCTATATGATCCGTGTTTAAGCCATAACATAATTTTCTA 64175 | | || |||| || ||| ||||| | | || || ||||| ||||| | Sbjct 328447 CGCTGGGTGATCTTAACAGCATCAATATGTGCAGGGTCTAGACCATAGCATAAACGTGAT 328506 Query 64176 ATACGAGACGTGATTTTATCAAACATGACATTTTCCTT 64213 ||||| | || || || || ||| | |||| |||||| Sbjct 328507 ATACGTGCAGTAATCTTGTCGAACCTAACATGTTCCTT 328544 >seq4 Length=1065440 Score = 251 bits (278), Expect = 9e-62 Identities = 594/888 (67%), Gaps = 18/888 (2%) Strand=Plus/Plus Query 33013 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 33072 || ||||| ||| || | |||||||||||||| || || || ||| || || || Sbjct 810920 TTCTGGTAGTCAGAGACTCTCTTTTCGAAAAAATTGGTCTTACCAGCCAGCGAGATGTTC 810979 Query 33073 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 33132 |||||||||||||| || || || || || ||| ||| || || || | | Sbjct 810980 TCCATGAAATCAAATGGGTTAGTCACGTTGAAAAATTTCTTGTTCCCGAAAGCGACCAGT 811039 Query 33133 AATCTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 33192 | |||||| |||||||| || | || ||||||| || ||||| || | | Sbjct 811040 AGTCTATCAGCGACGAACTCAACGTACTGGTTCATCAGGTCGGCGTTCATACCCAATAAA 811099 Query 33193 TTAACTGGAAGAGCCGCAGT-AAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAAT 33251 ||| || ||||| | | ||| | |||| ||| || || || || || ||||| Sbjct 811100 GAAACGGGTAGAGCATCGATGAAGTACCTCTT-TTCGATCTCGACGGCTTCAGTAATAAT 811158 Query 33252 AGATC---TAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGC 33308 | ||| || || || || | ||||| ||| | | |||||| Sbjct 811159 CTTTTCGATAATGGAAGGATCT---GGCTTATTCTTCAAATGAGCAAATAGTAGACATGC 811215 Query 33309 GAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGG 33368 |||||| || | ||| || ||||| | || | |||||| |||||||| || || || Sbjct 811216 AAAATCGGTATGTAAACCTTCATCTCTGCAGATCAATTCGTTAGAAAACGTTAGACCTGG 811275 Query 33369 CATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCC 33428 |||||| || ||| || | ||| || || | ||| || || || |||||||| || || Sbjct 811276 CATTAGACCTTTCTTCTTCAACCAGAAGATAGCAGCAAAGGAACCTGAAAAGAAAATACC 811335 Query 33429 TTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CGCTGTCATGTATCCA 33485 ||| | ||||| || |||| | ||||||| | | | | ||||| || ||||| Sbjct 811336 TTCAATGGCAGCGAAAGCAACCAATCTCTCTGCGAAGATAGATTCACTGTCCTGAATCCA 811395 Query 33486 CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAG 33545 | |||||| |||||||||| ||| | ||| || |||| || ||||| || | Sbjct 811396 TCTGATAGCCCATTCGGCCTTCTCTTTAATCTGAGGAATGTTTTCAATCGCATTGAATAA 811455 Query 33546 ATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGA 33605 | | |||| || ||| || | ||||||||| || || || ||| | || || Sbjct 811456 GAAATCGCTTTCCTTTGGATCCTTGATATAAGTATCAATTAACAGGGAATAGGTCTCTGA 811515 Query 33606 ATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTAC 33665 ||||||||||| || || || || || ||||||||| |||| || | ||| || || Sbjct 811516 GTGAATGTTTTCCATCATGATTTGGAAACCATAGAAACATTTAGCTTCTGGAATTTGCAC 811575 Query 33666 TTCTGTAC--AAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAA 33723 ||||| || ||| || || | ||||| ||||| ||||| || ||| ||| ||||| Sbjct 811576 TTCTGCACTGAAATTC--TCAACTAAATTCTCATTTACTATACCATCAGAGGCAGCAAAG 811633 Query 33724 AACGCCAATACATGTTTTATAAAATATTTTTCG-TCTGGT--GTTAGTTTATTCCAATCA 33780 || ||||| ||| | || ||| || ||||| ||| | | | |||||||||||| Sbjct 811634 AAGGCCAAGACACGGGAGATGAAAAATCTTTCGTTCTCATTCATACGGTTATTCCAATCA 811693 Query 33781 TTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTA 33840 | ||||| || || | ||| | ||||| | ||||| || || |||||||| | ||| Sbjct 811694 TGAATATCCTTCGACAGATCAATCTCTTCGGCCGTCCAGAACGAAGCCTCTGCTCTCTTA 811753 Query 33841 TACATGTTCCAGATGTCATAATATTGGATTGGGAAAATAACAAATCTA 33888 ||| | ||| || |||| |||| ||||||||| | |||||||||| Sbjct 811754 TACGCTTGCCAAATCTCATGGTATTTGATTGGGAATAGAACAAATCTA 811801 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622946763936960