Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F002214845.1_202017-07-
05] 56 sequences; 9,683,383 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq7 237 4e-57
seq4 156 1e-32
seq1 125 2e-23
>seq7
Length=810710
Score = 237 bits (262), Expect = 4e-57
Identities = 1080/1688 (64%), Gaps = 46/1688 (3%)
Strand=Plus/Minus
Query 363430 ATCAATGGTGATATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATC 363489
|| |||||||| | | |||||| || || |||||| | ||| | |||||| |||||||
Sbjct 328097 ATAAATGGTGAAGTCGCTGAACGTCCTCAACATATGATTATGAGAGTTGCTGTTGGTATT 328038
Query 363490 CATTGCCCGGATGTTGATGCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGTG-TA-T 363547
||| | || | || | || ||||| || ||||| || | || || | | || |
Sbjct 328037 CATGGTGACGACATCGAGTCTGCTATTGAGACTTATAATCTGAT--GTCCTTGAGATACT 327980
Query 363548 TCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTT 363607
||| || || | ||||| | | ||||||||| |||| || ||||||||||| |
Sbjct 327979 TCATTCATGCTTCTCCAACTCTTTTCAATGCTGGTACTCCACGCCCTCAGATGTCTTCAT 327920
Query 363608 GCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATT 363667
| || || | |||||||| || |||||||||||||| | || || | ||| | |
Sbjct 327919 GTTTCCTAATCGCCATGAAGGATGACTCCATCGAGGGTATTTACGATACTTTGAAGGAAT 327860
Query 363668 GTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC-A 363726
||||| | ||||| |||| || || || |||||| | || ||||| ||||| | |
Sbjct 327859 GTGCTATGATTTCTAAGACCGCTGGTGGTATTGGTTTGCACATACACAACATTCGTTCTA 327800
Query 363727 C-AGAACAGTTACATTCGCGGCACAGGGGGATAC-TCGAATGGGCTGGTTCCCATGCTTC 363784
| | || || ||| || || || ||| ||||| ||| || | |||||| | |
Sbjct 327799 CGGGTTCA--TATATTGCAGGTACTAACGG-TACTTCGAACGGGTTGATCCCCATGGTAC 327743
Query 363785 GTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGG-AGGAAAGCGCAAAGGGGCG 363843
|||| || |||| ||||| | || || || || ||||| | ||| || ||| ||
Sbjct 327742 GTGTCTTCAACAACACTGCTCGTTATGTGGATCAAGGTGGTAACAAAAGGC-CAGGTGCT 327684
Query 363844 TTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAA- 363902
|| ||| |||| | || || || || || || ||||| || | || |||||||
Sbjct 327683 TTCGCTTTGTACTTGGAACCATGGCACGCAGACATCTTTGATTTCATAGATATCCGGAAG 327624
Query 363903 AAACACGGGAA--AAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCT 363960
|| ||||| || ||||| ||| |||||| | ||| ||||| || || ||| || |
Sbjct 327623 AACCACGGTAAGGAAGAG--ATT-CGTGCAAGAGATTTGTTCCCAGCCCTCTGGATTCCA 327567
Query 363961 GACCATTTTATGAAGCGCGT---GGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACAC 364017
|| || ||||| || || ||| ||| ||| ||| | | || | |||
Sbjct 327566 GATTTGTTCATGAAACGTGTTCAAGAGAATGGT--GAA-TGGACTTTGTTCTCTCCAAGT 327510
Query 364018 GAATGTCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTAT 364077
||| ||||||| | || ||||| | ||||| || | || || | || ||| ||
Sbjct 327509 GAAGCTCCAGGTTTGTCTGATGTTTATGGTGATGAATTTGAAGCCTTGTATGAACGTTAC 327450
Query 364078 GAATCGGAGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATG 364137
| | || || | | | ||||| || || || || || |||| || ||| ||
Sbjct 327449 GTCGCTGAAGGTCGTGGTAGAAAGACTATCAAAGCTCAAAAACTGTGGTACGCTATCTTG 327390
Query 364138 GATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAG 364197
|| || || | ||||| || || || | ||| | ||||||||| | || || |||
Sbjct 327389 GAATCTCAAACAGAGACTGGTACTCCATTCATGCTTTACAAAGATGCCTGTAATATAAAG 327330
Query 364198 TCCAACCAGCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAA 364257
|||||| || || | ||||| ||| | ||| | ||| || || ||||
Sbjct 327329 AGCAACCAAAAGAACTTGGGTACCATTAAATCCTCTAACTTGTGTTGTGAAATCGTTGAG 327270
Query 364258 TACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTT 364317
||| | || || || ||||||||||| |||||| | || || ||||| | || ||| |
Sbjct 327269 TACTCAGCACCTGATGAGACTGCCGTTTGTAACTTGGCCTCCATCGCTTTACCATCGTGT 327210
Query 364318 GTAAAAGATGGTACTTTTG------ACCACCAGCATCTTTATG--ACGTAACCTATCA-T 364368
| ||| || | | || ||| | || || || | || | || | |
Sbjct 327209 ATTCAAGTTGCTGATGATGGTAAGACCCAGTGGTATGATTTTGCCAAGTTGCATAAAATT 327150
Query 364369 GC---------TACTTGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCT 364419
|| ||| | || | ||||||| ||||| || || || ||| |||||
Sbjct 327149 GCCAAGGTTATCACTCGTAACTTGAACAAGGTCATCGATCGAAACTACTACCCAGTTCCT 327090
Query 364420 GAAGCCGAGCGTTCTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCT 364479
||||| ||||||||| | | | || || | ||| ||||| | || | |||
Sbjct 327089 GAAGCTAGAAACTCTAATATGAGAAACAGACCTATGGCTCTAGGTGTCAATGGTTTGGCT 327030
Query 364480 GACGTTTTTATGATGCTCAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAG 364539
||||| ||||||||| | | ||||||| || | || || | |||||| |
Sbjct 327029 GACGTGTTTATGATGTTGCGTGTTCCATTTGAGTCTCAAGAAGCCAAGGATCTAAACATC 326970
Query 364540 GAGATCTTTGAAACAATGTATTTTGCCGCAATGACTGCTTCGTGTGATTTGGCAAAAACC 364599
| ||||| ||||| || || || | || || || ||||| ||||| || |
Sbjct 326969 CAAATCTTCGAAACTATCTACCACGCTTCTTTGGAAGCCTCCTGTGAGTTGGCGAAGAAG 326910
Query 364600 AAGGGAAAGTACTCTACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGAT 364659
| ||| ||||| |||||||| || || || | || || || | || |||| |||
Sbjct 326909 GATGGACCTTACTCCACTTATGAAGGTTCTCCAATCTCTCAAGGTATTTTGCAGTACGAT 326850
Query 364660 CTATGGAATGTCACGCCATCTGTCCGATGGAACTGGGATACGCTACGTTCCAACGTTAAG 364719
|| ||||| || ||||| | | |||| | ||||| || | | | | |||
Sbjct 326849 CTGTGGAACACCAAACCATCGGATCTATGGGATTGGGACACTTTGAAGAAAAGCATCAAG 326790
Query 364720 AAGCATGGTACTCGCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAG 364779
| ||||| | | ||||| | | || || ||||| || || || ||| | |||
Sbjct 326789 GAATATGGTGTTAGAAACTCTTTGCTATTGGCCCCAATGCCAACTGCGTCGACTTCCCAG 326730
Query 364780 ATCCTCGGAAACAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTT 364839
|| || || |||||||||| ||||| || | || |||| | || || || || ||
Sbjct 326729 ATTCTAGGTTACAACGAGTGTTTCGAGCCATACACTTCCAATATGTACTCTCGTCGTGTG 326670
Query 364840 CTTTCCGGAGAATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGG 364899
| ||||| ||||| | | || || ||| | | ||| | ||||| ||
Sbjct 326669 TTATCCGGTGAATTCCAAATTGTCAACCCTTACTTGCTACGTGATTTGGTCGACCTAGGT 326610
Query 364900 CTGTGGGGTGACAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATT 364959
| |||| ||| || |||||| | | |||||| | | |||||| || | || || |
Sbjct 326609 ATCTGGGATGATAGTATGAAGCAACACATCATCACTGATAATGGCTCCATCCAAAATCTA 326550
Query 364960 CCAGGAT-TTCCAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCG 365018
|| | || |||| |||| || ||| | | ||||| || || |||||||| ||
Sbjct 326549 CC-GAATATTCCTCAAGAACTAAAGGATTTGTACAAGACTGTTTGGGAAATCTCTCAAAA 326491
Query 365019 AACTCTCATTGATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAA 365078
|||| |||| || ||||| || ||||| | || || ||| |||| ||| || || ||
Sbjct 326490 AACTATCATCGAGATGGCAGCTGATCGTGCTGTTTACATCGATCAGTCCCAATCATTGAA 326431
Query 365079 CGTATTCA 365086
| |||||
Sbjct 326430 C--ATTCA 326425
>seq4
Length=1065440
Score = 156 bits (172), Expect = 1e-32
Identities = 306/443 (69%), Gaps = 17/443 (4%)
Strand=Plus/Minus
Query 22219 GCATTCTTTGCTACCGCAGACGGTATAGTTTTTGAGAATCTAGTGACTAATTT---TGCA 22275
|| ||||||||| || | || |||||||| ||||||| |||| ||||| ||||
Sbjct 811638 GCCTTCTTTGCTGCCTCTGATGGTATAGTAAATGAGAATTTAGTTGAGAATTTCAGTGCA 811579
Query 22276 TCTGAAATTCAATACCCAGAGGCCAGATGTTTCTATGGTGTGCAAATGATGATTGAAAAT 22335
||| | ||| ||||| || | ||||||||||||| | ||||| ||||| |||||
Sbjct 811578 ---GAAGTGCAAATTCCAGAAGCTAAATGTTTCTATGGTTTCCAAATCATGATGGAAAAC 811522
Query 22336 GTTCACGCGGAAACATATTCTATGATGCTACAGTCACTCGTAGAA--GATAAAGACGAAC 22393
||||| | || || ||||| || | | | ||| || | ||| | | |||
Sbjct 811521 ATTCACTCAGAGACCTATTCCCTGTTAATTGAT--ACTTATATCAAGGATCCAAAGGAA- 811465
Query 22394 AACGAAA-CTTATTCCGCGCGATTCGCACCATTCAATCA-ATTAAGAATAAGGCAGATTG 22451
| ||| ||||||| |||||| | ||||| ||| ||||| | ||||| || ||
Sbjct 811464 AGCGATTTCTTATTCAATGCGATTGAAAACATTCC-TCAGATTAAAGAGAAGGCCGAATG 811406
Query 22452 GGCGCTGAAATGGAT---GAACAATGAACGTTCATTCGCGGAACGTCTTATTGCATTTGC 22508
||| | | |||||| | ||| |||| | ||||| || | | |||| || ||
Sbjct 811405 GGCTATCAGATGGATTCAGGACAGTGAATCTATCTTCGCAGAGAGATTGGTTGCTTTCGC 811346
Query 22509 TGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCTTTTGGCTaaaaaaaCG 22568
|| ||||||| ||||||||||| || | ||| ||| ||||| ||| | || ||
Sbjct 811345 TGCCATTGAAGGTATTTTCTTTTCAGGTTCCTTTGCTGCTATCTTCTGGTTGAAGAAGAA 811286
Query 22569 TGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCCGAGATGAGGGTCTTCA 22628
| | ||||| |||||||||||||| || || || || || ||||||| ||| | ||
Sbjct 811285 AGGTCTAATGCCAGGTCTAACGTTTTCTAACGAATTGATCTGCAGAGATGAAGGTTTACA 811226
Query 22629 TACCGATTTTGCGTGTATGCTAT 22651
|||||||||||| ||| | ||||
Sbjct 811225 TACCGATTTTGCATGTCTACTAT 811203
>seq1
Length=1424806
Score = 125 bits (138), Expect = 2e-23
Identities = 350/534 (66%), Gaps = 10/534 (2%)
Strand=Plus/Minus
Query 363770 TGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAA 363829
||||||| |||||||| || || | || ||||| || || || || |||||||| |
Sbjct 989393 TGGTTCCAATGCTTCGCGTTTTCAATAACACTGCAAGATATGTAGATCAGGGTGGCAACA 989334
Query 363830 AGCGCAAAGGGGCGT-TTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTT 363888
|| | || || | |||| || ||||||||||| ||||| || || |||| |||
Sbjct 989333 AGAGGCCCGGAGCTTATTGC-ATATATCTCGAGCCATGGCATGCGGACATCCTTGATTTT 989275
Query 363889 CTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCA 363948
|| |||| || || ||| || ||||| ||| || | || | |||||||| | |||
Sbjct 989274 CTACAGCTTCGAAAGAACCACGGTAAAGAAGAAATGAGAGCCAGAGATCTGTTTTTTGCG 989215
Query 363949 CTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTT 364008
|| ||| | |||||| || |||| ||| || ||| | | |||||| | |||
Sbjct 989214 CTGTGGATACCTGACCTGTTCATGAGGCGGGTCGAGTCCAATGGCGATTGGTGTTTGTTT 989155
Query 364009 TGCCCACACGAATGTCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATAC 364068
| ||| | || || || || | |||||| | || | || | || || ||||
Sbjct 989154 AGTCCAGATGAGGCCCCTGGACTATGCGATGTGTACGGCAAAGAATTTGATGACTTATAT 989095
Query 364069 GAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTT 364128
|| | |||||| || | || | ||| || || || || ||||||| |
Sbjct 989094 GAGCATTATGAAACGAATGGTTTACCAATGAAGCGGATCAAGGCTCAAAAACTATGGTCT 989035
Query 364129 GCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGC 364188
| || | | || |||||||||||| || | |||||||||||||| || |||
Sbjct 989034 GAGATTTTACAAAGTCAAATTGAGACAGGAGGTCCTTTCATGTTGTACAAAGACTCTTGC 988975
Query 364189 AACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAGAGC----AACCTATGTAC 364244
|| || || |||||| || | | || || || |||| | ||||| |||
Sbjct 988974 AATGAGAAATCAAACCAGAAGAATTTGGGGAC----CATCAGATCGTCAAACCTTTGTTG 988919
Query 364245 CGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTC 364298
||||||||||| |||| || ||||| || || || ||||||||||| ||
Sbjct 988918 TGAGATTATTGAGTACAGTTCTAAGGACGAAACAGCTGTCTGTAACCTTGCTTC 988865
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303352664843792
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