Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F002214845.1_202017-07- 05] 56 sequences; 9,683,383 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq7 237 4e-57 seq4 156 1e-32 seq1 125 2e-23 >seq7 Length=810710 Score = 237 bits (262), Expect = 4e-57 Identities = 1080/1688 (64%), Gaps = 46/1688 (3%) Strand=Plus/Minus Query 363430 ATCAATGGTGATATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATC 363489 || |||||||| | | |||||| || || |||||| | ||| | |||||| ||||||| Sbjct 328097 ATAAATGGTGAAGTCGCTGAACGTCCTCAACATATGATTATGAGAGTTGCTGTTGGTATT 328038 Query 363490 CATTGCCCGGATGTTGATGCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGTG-TA-T 363547 ||| | || | || | || ||||| || ||||| || | || || | | || | Sbjct 328037 CATGGTGACGACATCGAGTCTGCTATTGAGACTTATAATCTGAT--GTCCTTGAGATACT 327980 Query 363548 TCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTT 363607 ||| || || | ||||| | | ||||||||| |||| || ||||||||||| | Sbjct 327979 TCATTCATGCTTCTCCAACTCTTTTCAATGCTGGTACTCCACGCCCTCAGATGTCTTCAT 327920 Query 363608 GCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATT 363667 | || || | |||||||| || |||||||||||||| | || || | ||| | | Sbjct 327919 GTTTCCTAATCGCCATGAAGGATGACTCCATCGAGGGTATTTACGATACTTTGAAGGAAT 327860 Query 363668 GTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC-A 363726 ||||| | ||||| |||| || || || |||||| | || ||||| ||||| | | Sbjct 327859 GTGCTATGATTTCTAAGACCGCTGGTGGTATTGGTTTGCACATACACAACATTCGTTCTA 327800 Query 363727 C-AGAACAGTTACATTCGCGGCACAGGGGGATAC-TCGAATGGGCTGGTTCCCATGCTTC 363784 | | || || ||| || || || ||| ||||| ||| || | |||||| | | Sbjct 327799 CGGGTTCA--TATATTGCAGGTACTAACGG-TACTTCGAACGGGTTGATCCCCATGGTAC 327743 Query 363785 GTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGG-AGGAAAGCGCAAAGGGGCG 363843 |||| || |||| ||||| | || || || || ||||| | ||| || ||| || Sbjct 327742 GTGTCTTCAACAACACTGCTCGTTATGTGGATCAAGGTGGTAACAAAAGGC-CAGGTGCT 327684 Query 363844 TTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAA- 363902 || ||| |||| | || || || || || || ||||| || | || ||||||| Sbjct 327683 TTCGCTTTGTACTTGGAACCATGGCACGCAGACATCTTTGATTTCATAGATATCCGGAAG 327624 Query 363903 AAACACGGGAA--AAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCT 363960 || ||||| || ||||| ||| |||||| | ||| ||||| || || ||| || | Sbjct 327623 AACCACGGTAAGGAAGAG--ATT-CGTGCAAGAGATTTGTTCCCAGCCCTCTGGATTCCA 327567 Query 363961 GACCATTTTATGAAGCGCGT---GGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACAC 364017 || || ||||| || || ||| ||| ||| ||| | | || | ||| Sbjct 327566 GATTTGTTCATGAAACGTGTTCAAGAGAATGGT--GAA-TGGACTTTGTTCTCTCCAAGT 327510 Query 364018 GAATGTCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTAT 364077 ||| ||||||| | || ||||| | ||||| || | || || | || ||| || Sbjct 327509 GAAGCTCCAGGTTTGTCTGATGTTTATGGTGATGAATTTGAAGCCTTGTATGAACGTTAC 327450 Query 364078 GAATCGGAGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATG 364137 | | || || | | | ||||| || || || || || |||| || ||| || Sbjct 327449 GTCGCTGAAGGTCGTGGTAGAAAGACTATCAAAGCTCAAAAACTGTGGTACGCTATCTTG 327390 Query 364138 GATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAG 364197 || || || | ||||| || || || | ||| | ||||||||| | || || ||| Sbjct 327389 GAATCTCAAACAGAGACTGGTACTCCATTCATGCTTTACAAAGATGCCTGTAATATAAAG 327330 Query 364198 TCCAACCAGCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAA 364257 |||||| || || | ||||| ||| | ||| | ||| || || |||| Sbjct 327329 AGCAACCAAAAGAACTTGGGTACCATTAAATCCTCTAACTTGTGTTGTGAAATCGTTGAG 327270 Query 364258 TACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTT 364317 ||| | || || || ||||||||||| |||||| | || || ||||| | || ||| | Sbjct 327269 TACTCAGCACCTGATGAGACTGCCGTTTGTAACTTGGCCTCCATCGCTTTACCATCGTGT 327210 Query 364318 GTAAAAGATGGTACTTTTG------ACCACCAGCATCTTTATG--ACGTAACCTATCA-T 364368 | ||| || | | || ||| | || || || | || | || | | Sbjct 327209 ATTCAAGTTGCTGATGATGGTAAGACCCAGTGGTATGATTTTGCCAAGTTGCATAAAATT 327150 Query 364369 GC---------TACTTGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCT 364419 || ||| | || | ||||||| ||||| || || || ||| ||||| Sbjct 327149 GCCAAGGTTATCACTCGTAACTTGAACAAGGTCATCGATCGAAACTACTACCCAGTTCCT 327090 Query 364420 GAAGCCGAGCGTTCTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCT 364479 ||||| ||||||||| | | | || || | ||| ||||| | || | ||| Sbjct 327089 GAAGCTAGAAACTCTAATATGAGAAACAGACCTATGGCTCTAGGTGTCAATGGTTTGGCT 327030 Query 364480 GACGTTTTTATGATGCTCAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAG 364539 ||||| ||||||||| | | ||||||| || | || || | |||||| | Sbjct 327029 GACGTGTTTATGATGTTGCGTGTTCCATTTGAGTCTCAAGAAGCCAAGGATCTAAACATC 326970 Query 364540 GAGATCTTTGAAACAATGTATTTTGCCGCAATGACTGCTTCGTGTGATTTGGCAAAAACC 364599 | ||||| ||||| || || || | || || || ||||| ||||| || | Sbjct 326969 CAAATCTTCGAAACTATCTACCACGCTTCTTTGGAAGCCTCCTGTGAGTTGGCGAAGAAG 326910 Query 364600 AAGGGAAAGTACTCTACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGAT 364659 | ||| ||||| |||||||| || || || | || || || | || |||| ||| Sbjct 326909 GATGGACCTTACTCCACTTATGAAGGTTCTCCAATCTCTCAAGGTATTTTGCAGTACGAT 326850 Query 364660 CTATGGAATGTCACGCCATCTGTCCGATGGAACTGGGATACGCTACGTTCCAACGTTAAG 364719 || ||||| || ||||| | | |||| | ||||| || | | | | ||| Sbjct 326849 CTGTGGAACACCAAACCATCGGATCTATGGGATTGGGACACTTTGAAGAAAAGCATCAAG 326790 Query 364720 AAGCATGGTACTCGCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAG 364779 | ||||| | | ||||| | | || || ||||| || || || ||| | ||| Sbjct 326789 GAATATGGTGTTAGAAACTCTTTGCTATTGGCCCCAATGCCAACTGCGTCGACTTCCCAG 326730 Query 364780 ATCCTCGGAAACAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTT 364839 || || || |||||||||| ||||| || | || |||| | || || || || || Sbjct 326729 ATTCTAGGTTACAACGAGTGTTTCGAGCCATACACTTCCAATATGTACTCTCGTCGTGTG 326670 Query 364840 CTTTCCGGAGAATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGG 364899 | ||||| ||||| | | || || ||| | | ||| | ||||| || Sbjct 326669 TTATCCGGTGAATTCCAAATTGTCAACCCTTACTTGCTACGTGATTTGGTCGACCTAGGT 326610 Query 364900 CTGTGGGGTGACAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATT 364959 | |||| ||| || |||||| | | |||||| | | |||||| || | || || | Sbjct 326609 ATCTGGGATGATAGTATGAAGCAACACATCATCACTGATAATGGCTCCATCCAAAATCTA 326550 Query 364960 CCAGGAT-TTCCAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCG 365018 || | || |||| |||| || ||| | | ||||| || || |||||||| || Sbjct 326549 CC-GAATATTCCTCAAGAACTAAAGGATTTGTACAAGACTGTTTGGGAAATCTCTCAAAA 326491 Query 365019 AACTCTCATTGATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAA 365078 |||| |||| || ||||| || ||||| | || || ||| |||| ||| || || || Sbjct 326490 AACTATCATCGAGATGGCAGCTGATCGTGCTGTTTACATCGATCAGTCCCAATCATTGAA 326431 Query 365079 CGTATTCA 365086 | ||||| Sbjct 326430 C--ATTCA 326425 >seq4 Length=1065440 Score = 156 bits (172), Expect = 1e-32 Identities = 306/443 (69%), Gaps = 17/443 (4%) Strand=Plus/Minus Query 22219 GCATTCTTTGCTACCGCAGACGGTATAGTTTTTGAGAATCTAGTGACTAATTT---TGCA 22275 || ||||||||| || | || |||||||| ||||||| |||| ||||| |||| Sbjct 811638 GCCTTCTTTGCTGCCTCTGATGGTATAGTAAATGAGAATTTAGTTGAGAATTTCAGTGCA 811579 Query 22276 TCTGAAATTCAATACCCAGAGGCCAGATGTTTCTATGGTGTGCAAATGATGATTGAAAAT 22335 ||| | ||| ||||| || | ||||||||||||| | ||||| ||||| ||||| Sbjct 811578 ---GAAGTGCAAATTCCAGAAGCTAAATGTTTCTATGGTTTCCAAATCATGATGGAAAAC 811522 Query 22336 GTTCACGCGGAAACATATTCTATGATGCTACAGTCACTCGTAGAA--GATAAAGACGAAC 22393 ||||| | || || ||||| || | | | ||| || | ||| | | ||| Sbjct 811521 ATTCACTCAGAGACCTATTCCCTGTTAATTGAT--ACTTATATCAAGGATCCAAAGGAA- 811465 Query 22394 AACGAAA-CTTATTCCGCGCGATTCGCACCATTCAATCA-ATTAAGAATAAGGCAGATTG 22451 | ||| ||||||| |||||| | ||||| ||| ||||| | ||||| || || Sbjct 811464 AGCGATTTCTTATTCAATGCGATTGAAAACATTCC-TCAGATTAAAGAGAAGGCCGAATG 811406 Query 22452 GGCGCTGAAATGGAT---GAACAATGAACGTTCATTCGCGGAACGTCTTATTGCATTTGC 22508 ||| | | |||||| | ||| |||| | ||||| || | | |||| || || Sbjct 811405 GGCTATCAGATGGATTCAGGACAGTGAATCTATCTTCGCAGAGAGATTGGTTGCTTTCGC 811346 Query 22509 TGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCTTTTGGCTaaaaaaaCG 22568 || ||||||| ||||||||||| || | ||| ||| ||||| ||| | || || Sbjct 811345 TGCCATTGAAGGTATTTTCTTTTCAGGTTCCTTTGCTGCTATCTTCTGGTTGAAGAAGAA 811286 Query 22569 TGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCCGAGATGAGGGTCTTCA 22628 | | ||||| |||||||||||||| || || || || || ||||||| ||| | || Sbjct 811285 AGGTCTAATGCCAGGTCTAACGTTTTCTAACGAATTGATCTGCAGAGATGAAGGTTTACA 811226 Query 22629 TACCGATTTTGCGTGTATGCTAT 22651 |||||||||||| ||| | |||| Sbjct 811225 TACCGATTTTGCATGTCTACTAT 811203 >seq1 Length=1424806 Score = 125 bits (138), Expect = 2e-23 Identities = 350/534 (66%), Gaps = 10/534 (2%) Strand=Plus/Minus Query 363770 TGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAA 363829 ||||||| |||||||| || || | || ||||| || || || || |||||||| | Sbjct 989393 TGGTTCCAATGCTTCGCGTTTTCAATAACACTGCAAGATATGTAGATCAGGGTGGCAACA 989334 Query 363830 AGCGCAAAGGGGCGT-TTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTT 363888 || | || || | |||| || ||||||||||| ||||| || || |||| ||| Sbjct 989333 AGAGGCCCGGAGCTTATTGC-ATATATCTCGAGCCATGGCATGCGGACATCCTTGATTTT 989275 Query 363889 CTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCA 363948 || |||| || || ||| || ||||| ||| || | || | |||||||| | ||| Sbjct 989274 CTACAGCTTCGAAAGAACCACGGTAAAGAAGAAATGAGAGCCAGAGATCTGTTTTTTGCG 989215 Query 363949 CTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTT 364008 || ||| | |||||| || |||| ||| || ||| | | |||||| | ||| Sbjct 989214 CTGTGGATACCTGACCTGTTCATGAGGCGGGTCGAGTCCAATGGCGATTGGTGTTTGTTT 989155 Query 364009 TGCCCACACGAATGTCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATAC 364068 | ||| | || || || || | |||||| | || | || | || || |||| Sbjct 989154 AGTCCAGATGAGGCCCCTGGACTATGCGATGTGTACGGCAAAGAATTTGATGACTTATAT 989095 Query 364069 GAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTT 364128 || | |||||| || | || | ||| || || || || ||||||| | Sbjct 989094 GAGCATTATGAAACGAATGGTTTACCAATGAAGCGGATCAAGGCTCAAAAACTATGGTCT 989035 Query 364129 GCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGC 364188 | || | | || |||||||||||| || | |||||||||||||| || ||| Sbjct 989034 GAGATTTTACAAAGTCAAATTGAGACAGGAGGTCCTTTCATGTTGTACAAAGACTCTTGC 988975 Query 364189 AACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAGAGC----AACCTATGTAC 364244 || || || |||||| || | | || || || |||| | ||||| ||| Sbjct 988974 AATGAGAAATCAAACCAGAAGAATTTGGGGAC----CATCAGATCGTCAAACCTTTGTTG 988919 Query 364245 CGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTC 364298 ||||||||||| |||| || ||||| || || || ||||||||||| || Sbjct 988918 TGAGATTATTGAGTACAGTTCTAAGGACGAAACAGCTGTCTGTAACCTTGCTTC 988865 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303352664843792