Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F002214845.1_202017-07- 05] 56 sequences; 9,683,383 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq6 113 4e-20 >seq6 Length=935435 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| ||||| | || |||| ||| | || || ||||| || |||||||||||| Sbjct 586040 CCACCACGCAATCTCAAAACTAGATGCAAAGTAGATTCCTTCTGGATGTTGTAATCGGAT 586099 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || | || ||||| ||||| |||||| |||| || | || ||||| || || Sbjct 586100 AGAGTTCTTCCATCTTCTAGTTGCTTACCTGCGAAGATCAATCTTTGTTGGTCAGGTGGA 586159 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || |||||||| || || || ||||| | || | |||||| | |||||| | Sbjct 586160 ATACCTTCTTTATCTTGAATCTTGCTCTTGACATTGTCAATAGTATCAGAGGACTCAACC 586219 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | ||||||||| |||| ||| || ||||| |||||||| Sbjct 586220 TCCAGGGTGATGGTTTTACCAGTTAAAGTCTTGACGAAGATCTGCAT 586266 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| ||||| | || |||| ||| | || || ||||| || |||||||||||| Sbjct 586268 CCACCACGCAATCTCAAAACTAGATGCAAAGTAGATTCCTTCTGGATGTTGTAATCGGAT 586327 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || | || ||||| ||||| |||||| |||| || | || ||||| || || Sbjct 586328 AGAGTTCTTCCATCTTCTAGTTGCTTACCTGCGAAGATCAATCTTTGTTGGTCAGGTGGA 586387 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || |||||||| || || || ||||| | || | |||||| | |||||| | Sbjct 586388 ATACCTTCTTTATCTTGAATCTTGCTCTTGACATTGTCAATAGTATCAGAGGACTCAACC 586447 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | ||||||||| |||| ||| || ||||| |||||||| Sbjct 586448 TCCAGGGTGATGGTTTTACCAGTTAAAGTCTTGACGAAGATCTGCAT 586494 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| ||||| | || |||| ||| | || || ||||| || |||||||||||| Sbjct 586496 CCACCACGCAATCTCAAAACTAGATGCAAAGTAGATTCCTTCTGGATGTTGTAATCGGAT 586555 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || | || ||||| ||||| |||||| |||| || | || ||||| || || Sbjct 586556 AGAGTTCTTCCATCTTCTAGTTGCTTACCTGCGAAGATCAATCTTTGTTGGTCAGGTGGA 586615 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || |||||||| || || || ||||| | || | |||||| | |||||| | Sbjct 586616 ATACCTTCTTTATCTTGAATCTTGCTCTTGACATTGTCAATAGTATCAGAGGACTCAACC 586675 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | ||||||||| |||| ||| || ||||| |||||||| Sbjct 586676 TCCAGGGTGATGGTTTTACCAGTTAAAGTCTTGACGAAGATCTGCAT 586722 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| ||||| | || |||| ||| | || || ||||| || |||||||||||| Sbjct 586724 CCACCACGCAATCTCAAAACTAGATGCAAAGTAGATTCCTTCTGGATGTTGTAATCGGAT 586783 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || | || ||||| ||||| |||||| |||| || | || ||||| || || Sbjct 586784 AGAGTTCTTCCATCTTCTAGTTGCTTACCTGCGAAGATCAATCTTTGTTGGTCAGGTGGA 586843 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || |||||||| || || || ||||| | || | |||||| | |||||| | Sbjct 586844 ATACCTTCTTTATCTTGAATCTTGCTCTTGACATTGTCAATAGTATCAGAGGACTCAACC 586903 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | ||||||||| |||| ||| || ||||| |||||||| Sbjct 586904 TCCAGGGTGATGGTTTTACCAGTTAAAGTCTTGACGAAGATCTGCAT 586950 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| ||||| | || |||| ||| | || || ||||| || |||||||||||| Sbjct 586952 CCACCACGCAATCTCAAAACTAGATGCAAAGTAGATTCCTTCTGGATGTTGTAATCGGAT 587011 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || | || ||||| ||||| |||||| |||| || | || ||||| || || Sbjct 587012 AGAGTTCTTCCATCTTCTAGTTGCTTACCTGCGAAGATCAATCTTTGTTGGTCAGGTGGA 587071 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || |||||||| || || || ||||| | || | |||||| | |||||| | Sbjct 587072 ATACCTTCTTTATCTTGAATCTTGCTCTTGACATTGTCAATAGTATCAGAGGACTCAACC 587131 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | ||||||||| |||| ||| || || ||||||||||| Sbjct 587132 TCCAGGGTGATGGTTTTACCAGTTAAAGTCTTGACAAAAATCTGCAT 587178 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| ||||| | || || | ||| | || || ||||| || |||||||||||| Sbjct 585584 CCACCACGCAATCTCAAAACCAGATGCAAAGTAGATTCCTTCTGGATGTTGTAATCGGAT 585643 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || | || ||||| ||||| |||||| |||| || | || ||||| || || Sbjct 585644 AGAGTTCTTCCATCTTCTAGTTGCTTACCTGCGAAGATCAATCTTTGTTGGTCAGGTGGA 585703 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || |||||||| || || || ||||| | || | |||||| | |||||| | Sbjct 585704 ATACCTTCTTTATCTTGAATCTTGCTCTTGACATTGTCAATAGTATCAGAGGACTCAACC 585763 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | ||||||||| |||| ||| || ||||| |||||||| Sbjct 585764 TCCAGGGTGATGGTTTTACCAGTTAAAGTCTTGACGAAGATCTGCAT 585810 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| ||||| | || || | ||| | || || ||||| || |||||||||||| Sbjct 585812 CCACCACGCAATCTCAAAACCAGATGCAAAGTAGATTCCTTCTGGATGTTGTAATCGGAT 585871 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || | || ||||| ||||| |||||| |||| || | || ||||| || || Sbjct 585872 AGAGTTCTTCCATCTTCTAGTTGCTTACCTGCGAAGATCAATCTTTGTTGGTCAGGTGGA 585931 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || |||||||| || || || ||||| | || | |||||| | |||||| | Sbjct 585932 ATACCTTCTTTATCTTGAATCTTGCTCTTGACATTGTCAATAGTATCAGAGGACTCAACC 585991 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | ||||||||| |||| ||| || ||||| |||||||| Sbjct 585992 TCCAGGGTGATGGTTTTACCAGTTAAAGTCTTGACGAAGATCTGCAT 586038 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472012469591040