Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F002214845.1_202017-07- 05] 56 sequences; 9,683,383 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq7 369 5e-97 seq4 255 7e-63 >seq7 Length=810710 Score = 369 bits (408), Expect = 5e-97 Identities = 1439/2258 (64%), Gaps = 37/2258 (2%) Strand=Plus/Plus Query 61840 CTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCC 61899 |||||| | ||||||||||| | ||| || |||| || || | || |||||||| || Sbjct 326295 CTTGTCAATGGTGAATTGAATAGCAGCAGAAGCGGCTTGTGTCCTCAGGTAGTACATACC 326354 Query 61900 CGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGG 61959 || || | ||| |||| ||||| ||||||||||| || | ||| | | || Sbjct 326355 AGTCTTCAAACCCTTCTTCCAACCGTAGAAATGCATACTAGTCAATTTACCCATAGTTGG 326414 Query 61960 ATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGC 62019 | | || || || |||| ||||| ||||||||| | | | | || || || Sbjct 326415 AGCACGGATGTGAATGTTCAATGATTGGGACTGATCGATGTAAACAGCACGATCAGCTGC 326474 Query 62020 CATTTTTATAATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATAT 62078 ||| | || || || ||||| | |||||||||| ||| || || || || ||| | | Sbjct 326475 CATCTCGATGATAGTTTTTTGAGAGATTTCCCAAACAGTCTTGTACAAATCCTTTAGT-T 326533 Query 62079 CTTCTGGAAGGTTTGT---ATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGA 62135 ||| |||| || | ||| || ||||| ||| ||| | || || | ||| | Sbjct 326534 CTTGAGGAATATTCGGTAGATTTTGGATGGAGCCATTATCAGTGATGATGTGTTGCTTCA 326593 Query 62136 TCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTT 62195 | ||||| ||| | | ||| ||| | | || | | || || || | || Sbjct 326594 TACTATCATCCCAGATACCTAGGTCGACCAAATCACGTAGCAAGTAAGGGTTGACAATTT 326653 Query 62196 GAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACT 62255 | ||||| || || || || | |||| ||| ||||| || || || || | | ||| Sbjct 326654 GGAATTCACCGGATAACACACGACGAGAGTACATATTGGAAGTGTATGGCTCGAAACACT 326713 Query 62256 CATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTAT 62315 | || | || | ||| || | ||| || ||||| ||||| || |||| | ||| | Sbjct 326714 CGTTGTAACCTAGAATCTGGGAAGTCGACGCAGTTGGCATTGGGGCCAATAGCAAAGAGT 326773 Query 62316 TTCTAAGACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACG 62375 |||||| ||| ||| |||| | | || | || ||||||| ||| |||||||| | Sbjct 326774 TTCTAACACCATATTCCTTGATGCTTTTCTTCAAAGTGTCCCAATCCCATAGATCCGATG 326833 Query 62376 GTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATG 62435 || || | |||||| | | | || ||| |||| | Sbjct 326834 GTTTGGTGTTCCACAGATCGTACTGCAAAATACCTTGAGAGATTGGAGAACCTTCATAAG 326893 Query 62436 TATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAA 62495 | ||| ||||| ||||||| || | ||||| || || || | | ||| || | Sbjct 326894 TGGAGTAAGGTCCATCCTTCTTCGCCAACTCACAGGAGGCTTCCAAAGAAGCGTGGTAGA 326953 Query 62496 TGGTTTCGAAGATCTTCTTATTTAGATCTTGCGCTTCCAGGCTATCAAATGGATAATTTA 62555 | ||||||||||| | | |||||||| | ||||| | ||||||||| | | Sbjct 326954 TAGTTTCGAAGATTTGGATGTTTAGATCCTTGGCTTCTTGAGACTCAAATGGAACACGCA 327013 Query 62556 AGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTAT 62615 | | |||||| |||| || || || | ||||| | | | |||||||| | |||| ||| Sbjct 327014 ACATCATAAACACGTCAGCCAAACCATTGACACCTAGAGCCATAGGTCTGTTTCTCATAT 327073 Query 62616 TAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTC 62675 ||||| || |||||| |||| || || || || ||| || | || || | || | Sbjct 327074 TAGAGTTTCTAGCTTCAGGAACTGGGTAGTAGTTTCGATCGATGACCTTGTTCAAGTTAC 327133 Query 62676 TGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGC---------CCAT 62726 || || ||| | | | | || ||| ||||||| | | | |||| Sbjct 327134 GAGTGATAACCTTGGCAATTTTATGCAACTTGGCAAAATCATACCACTGGGTCTTACCAT 327193 Query 62727 CTATTACAAACATG--TTCA--------ATGCAACAGATGCCAGATTACAAACGGCTACC 62776 | || | ||| || | || | || | || |||| ||||||||||| | Sbjct 327194 C-ATCAGCAACTTGAATACACGATGGTAAAGCGATGGAGGCCAAGTTACAAACGGCAGTC 327252 Query 62777 TCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCT 62836 |||| || | | || | | || ||| || | ||| | || ||||| || Sbjct 327253 TCATCAGGTGCTGAGTACTCAACGATTTCACAACACAAGTTAGAGGATTTAATGGTACCC 327312 Query 62837 AAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCA 62896 || || | ||| || |||||| | ||||| ||||| || ||||| ||||||||||||||| Sbjct 327313 AAGTTCTTTTGGTTGCTCTTTATATTACAGGCATCTTTGTAAAGCATGAATGGAGTACCA 327372 Query 62897 GTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTG 62956 || || | |||||||| | || || | ||| | | |||| || || | ||| Sbjct 327373 GTCTCTGTTTGAGATTCCAAGATAGCGTACCACAGTTTTTGAGCTTTGATAGTC--TTTC 327430 Query 62957 TATCTCTT--TTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACAT 63014 || | | ||| |||| || |||||| ||| || || || || |||||| Sbjct 327431 TACCACGACCTTCAGCGACGTAACGTTCATACAAGGCTTCAAATTCATCACCATAAACAT 327490 Query 63015 TGTCCAGTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTC 63074 || || ||| |||| ||| | | ||| | ||| || || | || | || | Sbjct 327491 CAGACAAACCTGGAGCTTCACTTGGAGAGAACAAAGTCCATTCACCATTCTCTTGAACAC 327550 Query 63075 GTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCT 63134 ||||||| || | ||| |||||||| || ||| || | |||||| | | | || | Sbjct 327551 GTTTCATGAACAAATCTGGAATCCAGAGGGCTGGGAACAAATCTCTTGCACGAATCTCTT 327610 Query 63135 CGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCA 63194 | || || ||||| | ||| | ||| | | || || | ||||| ||||||| Sbjct 327611 CCTTACCGTGGTTCTTCCGGATATCTATGAAATCAAAGATGTCTGCGTGCCATGGTTCCA 327670 Query 63195 AGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGT 63254 |||| | || | | | || |||| |||||| || || ||||| | || | ||| |||| Sbjct 327671 AGTACAAAGCGAAAGCACCTGGCCTTTTGTTACCACCTTGATCCACATAACGAGCAGTGT 327730 Query 63255 TATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATAT 63314 | || | || | | ||| || || | || || || ||||| || || |||| |||| Sbjct 327731 TGTTGAAGACACGTACCATGGGGATCAACCCGTTCGAAGTACCGTTAGTACCTGCAATAT 327790 Query 63315 AGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGA 63374 | || | | |||||| || || | ||| || || || || | ||||| | Sbjct 327791 ATGAACCCGTAGAACGAATGTTGTGTATGTGCAAACCAATACCACCAGCGGTCTTAGAAA 327850 Query 63375 TTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAA 63434 | | || ||| || || ||||| || || ||||| || |||||| ||||| | Sbjct 327851 TCATAGCACATTCCTTCAAAGTATCGTAAATACCCTCGATGGAGTCATCCTTCATGGCGA 327910 Query 63435 GTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAG 63494 ||| ||||| |||||| || | || ||| || ||||| || | || ||||||| Sbjct 327911 TTAGGAAACATGAAGACATCTGAGGGCGTGGAGTACCAGCATTGAAAAGAGTTGGAGAAG 327970 Query 63495 CGTGAGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCC 63554 | ||| | || || | || | ||||| || ||||||||||| || || || || Sbjct 327971 CATGAATGAAGTATCTCAAGGACATCAGATTATAAGTCTCAATAGCAGACTCGATGTCGT 328030 Query 63555 ATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGT 63614 |||||| || || || || | ||| | ||| || ||||| | |||| ||| | Sbjct 328031 CACCATGAATACCAACAGCAACTCTCATAATCATATGTTGAGGACGTTCAGCGACTTCAC 328090 Query 63615 TGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGA 63672 ||||| ||| || || || |||| |||||| || ||||||||||| | ||| Sbjct 328091 CATTTATCCTCAGCAGATAAGAACGCTCCAGAGTTTTGAACCCAAAATAGTTAAAGTTGA 328150 Query 63673 AAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATC 63732 || |||| || |||| |||| | ||||| | | |||||||| |||||| || | || Sbjct 328151 AA--TCTCTATCATAAACAATAGCAGAGTTCAACTCATCCTTATGTTTGTTGACGATGTC 328208 Query 63733 CATGGTAATACTT--GAAATAATAGGAAAATGTTTCCCATTTTTAGGATTGACATAGTTG 63790 ||| | ||| || || |||||| |||| ||| || || || || ||||||||| Sbjct 328209 CAT--AACCTCTTGCGAGATCATAGGAGAATGAACCCCGTTCTTTGGGTTCACATAGTTG 328266 Query 63791 AATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACG 63850 || || || || || | | ||| |||| | || | ||||| | ||| || | Sbjct 328267 AACAATTCACTCACAACCTGAGAAAACTGTTTAGTAGTCTGCTTGTGCAAATTAGAGATA 328326 Query 63851 GCTATTCTAGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATT 63910 |||||||||||||| | | | |||||||| ||||| || || | || || Sbjct 328327 GCTATTCTAGCGGCCAAAGTAGCATAATCAGGATGCACAGTCGTCATATACGCACAAGTT 328386 Query 63911 TCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACACCATTATATATTCCTTGGATAACC 63970 || || |||| | |||||||||| || || || ||||| | ||| | || || | Sbjct 328387 TCAGCAGCCAAATTGTCCAATTCAACAGTAGTCACACCTTCATAGACACCAGAAATGATA 328446 Query 63971 TTCATAGCTATTTTAATAGGATCTATATGATCAGTGTTTAAGCCATAACATAATTTTCTA 64030 | | || |||| || ||| ||||| ||| || || ||||| ||||| | Sbjct 328447 CGCTGGGTGATCTTAACAGCATCAATATGTGCAGGGTCTAGACCATAGCATAAACGTGAT 328506 Query 64031 ATACGAGATGTGATTTTATCAAACATGACATTTTCCTT 64068 ||||| | || || || || ||| | |||| |||||| Sbjct 328507 ATACGTGCAGTAATCTTGTCGAACCTAACATGTTCCTT 328544 >seq4 Length=1065440 Score = 255 bits (282), Expect = 7e-63 Identities = 416/594 (70%), Gaps = 10/594 (2%) Strand=Plus/Plus Query 32660 ACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAG 32719 |||||| |||||| |||| ||| || ||||| | || |||||||| |||||||| || Sbjct 811210 ACATGCAAAATCGGTATGTAAACCTTCATCTCTGCAGATCAATTCGTTAGAAAACGTTAG 811269 Query 32720 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAA 32779 || |||||||| || ||| || | ||| || || | ||||| || || |||||||| Sbjct 811270 ACCTGGCATTAGACCTTTCTTCTTCAACCAGAAGATAGCAGCAAAGGAACCTGAAAAGAA 811329 Query 32780 AATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CGCTGTCATG 32836 ||| ||||| | || || || |||| | ||||||| | | | | ||||| || Sbjct 811330 AATACCTTCAATGGCAGCGAAAGCAACCAATCTCTCTGCGAAGATAGATTCACTGTCCTG 811389 Query 32837 TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATT 32896 ||||| | |||||| |||||||||| ||| | ||| || | || || ||||| Sbjct 811390 AATCCATCTGATAGCCCATTCGGCCTTCTCTTTAATCTGAGGAATGTTTTCAATCGCATT 811449 Query 32897 AAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACAT 32956 || | | | |||| || ||| || | ||| |||||||| || || ||| | Sbjct 811450 GAATAAGAAATCGCTTTCCTTTGGATCCTTGATATAAGTATCAATTAACAGGGAATAGGT 811509 Query 32957 TTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAAT 33016 || || ||||||||||| || ||||| || || ||||| ||| |||| || | ||| Sbjct 811510 CTCTGAGTGAATGTTTTCCATCATGATTTGGAAACCATAGAAACATTTAGCTTCTGGAAT 811569 Query 33017 CTGTACTTCTGTAC--AAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCT 33074 || ||||||| || ||| || || ||||||| ||||| ||||| || ||| ||| Sbjct 811570 TTGCACTTCTGCACTGAAATTC--TCAACTAAATTCTCATTTACTATACCATCAGAGGCA 811627 Query 33075 GCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCG-TCTGGT--GTTAGTTTATTC 33131 ||||| || ||||| ||| | || ||| || ||||| ||| | | | |||||| Sbjct 811628 GCAAAGAAGGCCAAGACACGGGAGATGAAAAATCTTTCGTTCTCATTCATACGGTTATTC 811687 Query 33132 CAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCC 33191 ||||||| ||||| || || | ||| | ||||| | ||||| || || |||||||| Sbjct 811688 CAATCATGAATATCCTTCGACAGATCAATCTCTTCGGCCGTCCAGAACGAAGCCTCTGCT 811747 Query 33192 TTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAATCTA 33245 | |||||| | ||| || ||||| |||| ||||| || | |||||||||| Sbjct 811748 CTCTTATACGCTTGCCAAATCTCATGGTATTTGATTGGGAATAGAACAAATCTA 811801 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633631556457600