Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F002214845.1_202017-07- 05] 56 sequences; 9,683,383 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq2 143 2e-29 seq8 132 4e-26 seq6 118 9e-22 >seq2 Length=1385486 Score = 143 bits (158), Expect = 2e-29 Identities = 167/221 (76%), Gaps = 6/221 (3%) Strand=Plus/Minus Query 25008 TTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATC 25067 || || ||||||||||| ||||| ||||||| | ||||| || || ||||||||||| Sbjct 975626 TTCGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATT 975567 Query 25068 GAGTCACTG--AAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGG 25124 || || || ||| |||| | ||| ||||| ||||| || |||||||||||||| | Sbjct 975566 GA--CAATGTCAAGTCAAAGATTCAA-GACAAGGAAGGTATCCCACCTGACCAACAAAGA 975510 Query 25125 ATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAA 25184 | || ||||| || || ||||| ||||| | | | ||| || ||| ||||| || ||| Sbjct 975509 TTGATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACTTTGTCCGACTACAACATCCAA 975450 Query 25185 AAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 || |||||||| ||||| || || ||||| | ||||| || Sbjct 975449 AAGGAATCCACTCTACACTTGGTTCTAAGATTGAGAGGTGG 975409 >seq8 Length=676247 Score = 132 bits (146), Expect = 4e-26 Identities = 168/229 (73%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || ||||||||||||||||| | || || | ||||| || || ||| Sbjct 116045 ATGCAAATTTTCGTCAAGACTTTGACCGGTAAGACTATTACCTTGGAAGTCGAATCTTCT 115986 Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 |||||||| || || || ||| || ||| ||||| || || || |||||||||| Sbjct 115985 GACACTATTGA--CAATGTCAAGTCTAAGATCCAAGACAAGGAGGGTATCCCACCTGACC 115928 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 |||| | | || ||||| || || ||||| ||||||| | | ||| || || |||| Sbjct 115927 AACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCTGACTACA 115868 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 | || ||||| |||||||| | || || || ||||| | ||||| || Sbjct 115867 ACATCCAAAAGGAATCCACTTTGCACTTGGTCCTAAGATTGAGAGGTGG 115819 >seq6 Length=935435 Score = 118 bits (130), Expect = 9e-22 Identities = 154/211 (73%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| |||||||| || |||||| ||||||| | || || ||||| ||| Sbjct 587178 ATGCAGATTTTTGTCAAGACTTTAACTGGTAAAACCATCACCCTGGAGGTTGAGTCCTCT 587119 Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 || ||||| || || || ||| || || || |||||||| ||||||||||||| Sbjct 587118 GATACTATTGA--CAATGTCAAGAGCAAGATTCAAGATAAAGAAGGTATTCCACCTGACC 587061 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 |||| | | || || || || || ||| ||||||||| | ||| | |||||||| Sbjct 587060 AACAAAGATTGATCTTCGCAGGTAAGCAACTAGAAGATGGAAGAACTCTATCCGATTACA 587001 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGT 25207 | || || || ||||| || | ||| |||| Sbjct 587000 ACATCCAGAAGGAATCTACTTTGCATCTAGT 586970 Score = 114 bits (126), Expect = 1e-20 Identities = 153/211 (73%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || |||||||| || |||||| ||||||| | || || ||||| ||| Sbjct 586266 ATGCAGATCTTCGTCAAGACTTTAACTGGTAAAACCATCACCCTGGAGGTTGAGTCCTCT 586207 Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 || ||||| || || || ||| || || || |||||||| ||||||||||||| Sbjct 586206 GATACTATTGA--CAATGTCAAGAGCAAGATTCAAGATAAAGAAGGTATTCCACCTGACC 586149 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 |||| | | || || || || || ||| ||||||||| | ||| | |||||||| Sbjct 586148 AACAAAGATTGATCTTCGCAGGTAAGCAACTAGAAGATGGAAGAACTCTATCCGATTACA 586089 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGT 25207 | || || || ||||| || | ||| |||| Sbjct 586088 ACATCCAGAAGGAATCTACTTTGCATCTAGT 586058 Score = 114 bits (126), Expect = 1e-20 Identities = 153/211 (73%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || |||||||| || |||||| ||||||| | || || ||||| ||| Sbjct 586494 ATGCAGATCTTCGTCAAGACTTTAACTGGTAAAACCATCACCCTGGAGGTTGAGTCCTCT 586435 Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 || ||||| || || || ||| || || || |||||||| ||||||||||||| Sbjct 586434 GATACTATTGA--CAATGTCAAGAGCAAGATTCAAGATAAAGAAGGTATTCCACCTGACC 586377 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 |||| | | || || || || || ||| ||||||||| | ||| | |||||||| Sbjct 586376 AACAAAGATTGATCTTCGCAGGTAAGCAACTAGAAGATGGAAGAACTCTATCCGATTACA 586317 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGT 25207 | || || || ||||| || | ||| |||| Sbjct 586316 ACATCCAGAAGGAATCTACTTTGCATCTAGT 586286 Score = 114 bits (126), Expect = 1e-20 Identities = 153/211 (73%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || |||||||| || |||||| ||||||| | || || ||||| ||| Sbjct 586722 ATGCAGATCTTCGTCAAGACTTTAACTGGTAAAACCATCACCCTGGAGGTTGAGTCCTCT 586663 Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 || ||||| || || || ||| || || || |||||||| ||||||||||||| Sbjct 586662 GATACTATTGA--CAATGTCAAGAGCAAGATTCAAGATAAAGAAGGTATTCCACCTGACC 586605 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 |||| | | || || || || || ||| ||||||||| | ||| | |||||||| Sbjct 586604 AACAAAGATTGATCTTCGCAGGTAAGCAACTAGAAGATGGAAGAACTCTATCCGATTACA 586545 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGT 25207 | || || || ||||| || | ||| |||| Sbjct 586544 ACATCCAGAAGGAATCTACTTTGCATCTAGT 586514 Score = 114 bits (126), Expect = 1e-20 Identities = 153/211 (73%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || |||||||| || |||||| ||||||| | || || ||||| ||| Sbjct 586950 ATGCAGATCTTCGTCAAGACTTTAACTGGTAAAACCATCACCCTGGAGGTTGAGTCCTCT 586891 Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 || ||||| || || || ||| || || || |||||||| ||||||||||||| Sbjct 586890 GATACTATTGA--CAATGTCAAGAGCAAGATTCAAGATAAAGAAGGTATTCCACCTGACC 586833 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 |||| | | || || || || || ||| ||||||||| | ||| | |||||||| Sbjct 586832 AACAAAGATTGATCTTCGCAGGTAAGCAACTAGAAGATGGAAGAACTCTATCCGATTACA 586773 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGT 25207 | || || || ||||| || | ||| |||| Sbjct 586772 ACATCCAGAAGGAATCTACTTTGCATCTAGT 586742 Score = 111 bits (122), Expect = 1e-19 Identities = 145/199 (73%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || |||||||| || |||||| ||||||| | || || ||||| ||| Sbjct 585810 ATGCAGATCTTCGTCAAGACTTTAACTGGTAAAACCATCACCCTGGAGGTTGAGTCCTCT 585751 Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 || ||||| || || || ||| || || || |||||||| ||||||||||||| Sbjct 585750 GATACTATTGA--CAATGTCAAGAGCAAGATTCAAGATAAAGAAGGTATTCCACCTGACC 585693 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 |||| | | || || || || || ||| ||||||||| | ||| | |||||||| Sbjct 585692 AACAAAGATTGATCTTCGCAGGTAAGCAACTAGAAGATGGAAGAACTCTATCCGATTACA 585633 Query 25177 ATATTCAAAAAGAATCCAC 25195 | || || || ||||| || Sbjct 585632 ACATCCAGAAGGAATCTAC 585614 Score = 111 bits (122), Expect = 1e-19 Identities = 145/199 (73%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || |||||||| || |||||| ||||||| | || || ||||| ||| Sbjct 586038 ATGCAGATCTTCGTCAAGACTTTAACTGGTAAAACCATCACCCTGGAGGTTGAGTCCTCT 585979 Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 || ||||| || || || ||| || || || |||||||| ||||||||||||| Sbjct 585978 GATACTATTGA--CAATGTCAAGAGCAAGATTCAAGATAAAGAAGGTATTCCACCTGACC 585921 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 |||| | | || || || || || ||| ||||||||| | ||| | |||||||| Sbjct 585920 AACAAAGATTGATCTTCGCAGGTAAGCAACTAGAAGATGGAAGAACTCTATCCGATTACA 585861 Query 25177 ATATTCAAAAAGAATCCAC 25195 | || || || ||||| || Sbjct 585860 ACATCCAGAAGGAATCTAC 585842 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433327704253640