Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F002214845.1_202017-07-
05] 56 sequences; 9,683,383 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq2 143 2e-29
seq8 132 4e-26
seq6 118 9e-22
>seq2
Length=1385486
Score = 143 bits (158), Expect = 2e-29
Identities = 167/221 (76%), Gaps = 6/221 (3%)
Strand=Plus/Minus
Query 25008 TTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATC 25067
|| || ||||||||||| ||||| ||||||| | ||||| || || |||||||||||
Sbjct 975626 TTCGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATT 975567
Query 25068 GAGTCACTG--AAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGG 25124
|| || || ||| |||| | ||| ||||| ||||| || |||||||||||||| |
Sbjct 975566 GA--CAATGTCAAGTCAAAGATTCAA-GACAAGGAAGGTATCCCACCTGACCAACAAAGA 975510
Query 25125 ATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAA 25184
| || ||||| || || ||||| ||||| | | | ||| || ||| ||||| || |||
Sbjct 975509 TTGATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACTTTGTCCGACTACAACATCCAA 975450
Query 25185 AAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
|| |||||||| ||||| || || ||||| | ||||| ||
Sbjct 975449 AAGGAATCCACTCTACACTTGGTTCTAAGATTGAGAGGTGG 975409
>seq8
Length=676247
Score = 132 bits (146), Expect = 4e-26
Identities = 168/229 (73%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| || || ||||||||||||||||| | || || | ||||| || || |||
Sbjct 116045 ATGCAAATTTTCGTCAAGACTTTGACCGGTAAGACTATTACCTTGGAAGTCGAATCTTCT 115986
Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116
|||||||| || || || ||| || ||| ||||| || || || ||||||||||
Sbjct 115985 GACACTATTGA--CAATGTCAAGTCTAAGATCCAAGACAAGGAGGGTATCCCACCTGACC 115928
Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176
|||| | | || ||||| || || ||||| ||||||| | | ||| || || ||||
Sbjct 115927 AACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCTGACTACA 115868
Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
| || ||||| |||||||| | || || || ||||| | ||||| ||
Sbjct 115867 ACATCCAAAAGGAATCCACTTTGCACTTGGTCCTAAGATTGAGAGGTGG 115819
>seq6
Length=935435
Score = 118 bits (130), Expect = 9e-22
Identities = 154/211 (73%), Gaps = 4/211 (2%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || ||||| |||||||| || |||||| ||||||| | || || ||||| |||
Sbjct 587178 ATGCAGATTTTTGTCAAGACTTTAACTGGTAAAACCATCACCCTGGAGGTTGAGTCCTCT 587119
Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116
|| ||||| || || || ||| || || || |||||||| |||||||||||||
Sbjct 587118 GATACTATTGA--CAATGTCAAGAGCAAGATTCAAGATAAAGAAGGTATTCCACCTGACC 587061
Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176
|||| | | || || || || || ||| ||||||||| | ||| | ||||||||
Sbjct 587060 AACAAAGATTGATCTTCGCAGGTAAGCAACTAGAAGATGGAAGAACTCTATCCGATTACA 587001
Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGT 25207
| || || || ||||| || | ||| ||||
Sbjct 587000 ACATCCAGAAGGAATCTACTTTGCATCTAGT 586970
Score = 114 bits (126), Expect = 1e-20
Identities = 153/211 (73%), Gaps = 4/211 (2%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || || || |||||||| || |||||| ||||||| | || || ||||| |||
Sbjct 586266 ATGCAGATCTTCGTCAAGACTTTAACTGGTAAAACCATCACCCTGGAGGTTGAGTCCTCT 586207
Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116
|| ||||| || || || ||| || || || |||||||| |||||||||||||
Sbjct 586206 GATACTATTGA--CAATGTCAAGAGCAAGATTCAAGATAAAGAAGGTATTCCACCTGACC 586149
Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176
|||| | | || || || || || ||| ||||||||| | ||| | ||||||||
Sbjct 586148 AACAAAGATTGATCTTCGCAGGTAAGCAACTAGAAGATGGAAGAACTCTATCCGATTACA 586089
Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGT 25207
| || || || ||||| || | ||| ||||
Sbjct 586088 ACATCCAGAAGGAATCTACTTTGCATCTAGT 586058
Score = 114 bits (126), Expect = 1e-20
Identities = 153/211 (73%), Gaps = 4/211 (2%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || || || |||||||| || |||||| ||||||| | || || ||||| |||
Sbjct 586494 ATGCAGATCTTCGTCAAGACTTTAACTGGTAAAACCATCACCCTGGAGGTTGAGTCCTCT 586435
Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116
|| ||||| || || || ||| || || || |||||||| |||||||||||||
Sbjct 586434 GATACTATTGA--CAATGTCAAGAGCAAGATTCAAGATAAAGAAGGTATTCCACCTGACC 586377
Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176
|||| | | || || || || || ||| ||||||||| | ||| | ||||||||
Sbjct 586376 AACAAAGATTGATCTTCGCAGGTAAGCAACTAGAAGATGGAAGAACTCTATCCGATTACA 586317
Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGT 25207
| || || || ||||| || | ||| ||||
Sbjct 586316 ACATCCAGAAGGAATCTACTTTGCATCTAGT 586286
Score = 114 bits (126), Expect = 1e-20
Identities = 153/211 (73%), Gaps = 4/211 (2%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || || || |||||||| || |||||| ||||||| | || || ||||| |||
Sbjct 586722 ATGCAGATCTTCGTCAAGACTTTAACTGGTAAAACCATCACCCTGGAGGTTGAGTCCTCT 586663
Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116
|| ||||| || || || ||| || || || |||||||| |||||||||||||
Sbjct 586662 GATACTATTGA--CAATGTCAAGAGCAAGATTCAAGATAAAGAAGGTATTCCACCTGACC 586605
Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176
|||| | | || || || || || ||| ||||||||| | ||| | ||||||||
Sbjct 586604 AACAAAGATTGATCTTCGCAGGTAAGCAACTAGAAGATGGAAGAACTCTATCCGATTACA 586545
Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGT 25207
| || || || ||||| || | ||| ||||
Sbjct 586544 ACATCCAGAAGGAATCTACTTTGCATCTAGT 586514
Score = 114 bits (126), Expect = 1e-20
Identities = 153/211 (73%), Gaps = 4/211 (2%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || || || |||||||| || |||||| ||||||| | || || ||||| |||
Sbjct 586950 ATGCAGATCTTCGTCAAGACTTTAACTGGTAAAACCATCACCCTGGAGGTTGAGTCCTCT 586891
Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116
|| ||||| || || || ||| || || || |||||||| |||||||||||||
Sbjct 586890 GATACTATTGA--CAATGTCAAGAGCAAGATTCAAGATAAAGAAGGTATTCCACCTGACC 586833
Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176
|||| | | || || || || || ||| ||||||||| | ||| | ||||||||
Sbjct 586832 AACAAAGATTGATCTTCGCAGGTAAGCAACTAGAAGATGGAAGAACTCTATCCGATTACA 586773
Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGT 25207
| || || || ||||| || | ||| ||||
Sbjct 586772 ACATCCAGAAGGAATCTACTTTGCATCTAGT 586742
Score = 111 bits (122), Expect = 1e-19
Identities = 145/199 (73%), Gaps = 4/199 (2%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || || || |||||||| || |||||| ||||||| | || || ||||| |||
Sbjct 585810 ATGCAGATCTTCGTCAAGACTTTAACTGGTAAAACCATCACCCTGGAGGTTGAGTCCTCT 585751
Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116
|| ||||| || || || ||| || || || |||||||| |||||||||||||
Sbjct 585750 GATACTATTGA--CAATGTCAAGAGCAAGATTCAAGATAAAGAAGGTATTCCACCTGACC 585693
Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176
|||| | | || || || || || ||| ||||||||| | ||| | ||||||||
Sbjct 585692 AACAAAGATTGATCTTCGCAGGTAAGCAACTAGAAGATGGAAGAACTCTATCCGATTACA 585633
Query 25177 ATATTCAAAAAGAATCCAC 25195
| || || || ||||| ||
Sbjct 585632 ACATCCAGAAGGAATCTAC 585614
Score = 111 bits (122), Expect = 1e-19
Identities = 145/199 (73%), Gaps = 4/199 (2%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || || || |||||||| || |||||| ||||||| | || || ||||| |||
Sbjct 586038 ATGCAGATCTTCGTCAAGACTTTAACTGGTAAAACCATCACCCTGGAGGTTGAGTCCTCT 585979
Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116
|| ||||| || || || ||| || || || |||||||| |||||||||||||
Sbjct 585978 GATACTATTGA--CAATGTCAAGAGCAAGATTCAAGATAAAGAAGGTATTCCACCTGACC 585921
Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176
|||| | | || || || || || ||| ||||||||| | ||| | ||||||||
Sbjct 585920 AACAAAGATTGATCTTCGCAGGTAAGCAACTAGAAGATGGAAGAACTCTATCCGATTACA 585861
Query 25177 ATATTCAAAAAGAATCCAC 25195
| || || || ||||| ||
Sbjct 585860 ACATCCAGAAGGAATCTAC 585842
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433327704253640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |