Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F002214845.1_202017-07- 05] 56 sequences; 9,683,383 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq4 230 3e-55 >seq4 Length=1065440 Score = 230 bits (254), Expect = 3e-55 Identities = 408/590 (69%), Gaps = 9/590 (2%) Strand=Plus/Plus Query 93092 CACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAA 93151 || ||||| ||||||||||||||||| |||| | ||||| || || || |||| | Sbjct 811211 CATGCAAAATCGGTATGTAAACCTTCATCTCTGCAGATCAATTCGTTAGAAAACGTTAGA 811270 Query 93152 CCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaT 93211 ||||| | || ||| ||||| | ||| || || | |||||| ||| ||||| || Sbjct 811271 CCTGGCATTAGACCTTTCTTCTTCAACCAGAAGATAGCAGCAAAGGAACCTGAAAAGAAA 811330 Query 93212 ATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTG--C 93269 |||||||| | ||| || || || || | | || || || | | | | |||| | Sbjct 811331 ATACCTTCAATGGCAGCGAAAGCAACCAATCTCTCTGCGAAGATAG---ATTCACTGTCC 811387 Query 93270 TGA-TCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCG 93328 ||| ||||| | | |||||| ||||| || | ||||| ||| | |||| || || Sbjct 811388 TGAATCCATCTGATAGCCCATTCGGCCTTCTCTTTAATCTGAGGAATGTTTTCAATCGCA 811447 Query 93329 TTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATAC 93388 || |||| | |||| | || | | ||| || || ||||| |||||||| ||||| Sbjct 811448 TTGAATAAGAAATCGCTTTCCTTTGGATCCTTGATATAAGTATCAATTAACAGGGAATAG 811507 Query 93389 ATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTG 93448 | || || || | || ||||| |||||||| || ||||||||| ||||||| | Sbjct 811508 GTCTCTGAGTGAATGTTTTCCATCATGATTTGGAAACCATAGAAACATTTAGCTTCTGGA 811567 Query 93449 ATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCT 93508 || ||||||||| | || |||| || | ||| ||||| ||||||||||| || || Sbjct 811568 ATTTGCACTTCTGCACTGAAATTCTCAACTAAATTCTCATTTACTATACCATCAGAGGCA 811627 Query 93509 GCaaaaaaaGCCAATATATGCTTTAT--AAAATGTTTC-TCATCATCTTTAAGCTTATCC 93565 ||||| || ||||| | | | || ||||| |||| | |||| || | |||| | Sbjct 811628 GCAAAGAAGGCCAAGACACGGGAGATGAAAAATCTTTCGTTCTCATTCATACGGTTATTC 811687 Query 93566 CAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCT 93625 ||||| | ||| || || ||||| | |||||| | ||||| ||||| || |||||| Sbjct 811688 CAATCATGAATATCCTTCGACAGATCAATCTCTTCGGCCGTCCAGAACGAAGCCTCTGCT 811747 Query 93626 TTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATATGACAAA 93675 | || ||| | ||| || || || |||| ||||| |||| ||||| Sbjct 811748 CTCTTATACGCTTGCCAAATCTCATGGTATTTGATTGGGAATAGAACAAA 811797 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556860410197440