Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F002214845.1_202017-07- 05] 56 sequences; 9,683,383 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq2 181 2e-40 seq6 163 5e-35 seq8 161 2e-34 >seq2 Length=1385486 Score = 181 bits (200), Expect = 2e-40 Identities = 160/200 (80%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 ||||||||||| ||||| || ||||||||||| || ||||| | || || || ||||| Sbjct 975427 ACCAAGTGTAGAGTGGATTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACCGTCTTCC 975486 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 || ||||| || || || || | |||||||||||| ||||| || ||||||||||||||| Sbjct 975487 AATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTGTCTTGA 975546 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432 ||||||| |||||| || || ||||| | ||||| |||||||| |||||||| || Sbjct 975547 ATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGTCTTA 975606 Query 68433 CCCGTGAGGGTCTTGACGAA 68452 || || | ||||||||||| Sbjct 975607 CCAGTCAAAGTCTTGACGAA 975626 >seq6 Length=935435 Score = 163 bits (180), Expect = 5e-35 Identities = 164/213 (77%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| |||| || | || || || || |||||||| |||||||| || || || ||||| Sbjct 585598 CAAAACCAGATGCAAAGTAGATTCCTTCTGGATGTTGTAATCGGATAGAGTTCTTCCATC 585657 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 ||||| ||||| || ||||| || | |||||||||||| |||||||| ||||| || || Sbjct 585658 TTCTAGTTGCTTACCTGCGAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCTTTATC 585717 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 ||||||||| |||||| || || || || | || || || |||| ||||||||| Sbjct 585718 TTGAATCTTGCTCTTGACATTGTCAATAGTATCAGAGGACTCAACCTCCAGGGTGATGGT 585777 Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||| || || | ||||||||||| |||||||| Sbjct 585778 TTTACCAGTTAAAGTCTTGACGAAGATCTGCAT 585810 Score = 163 bits (180), Expect = 5e-35 Identities = 164/213 (77%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| |||| || | || || || || |||||||| |||||||| || || || ||||| Sbjct 585826 CAAAACCAGATGCAAAGTAGATTCCTTCTGGATGTTGTAATCGGATAGAGTTCTTCCATC 585885 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 ||||| ||||| || ||||| || | |||||||||||| |||||||| ||||| || || Sbjct 585886 TTCTAGTTGCTTACCTGCGAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCTTTATC 585945 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 ||||||||| |||||| || || || || | || || || |||| ||||||||| Sbjct 585946 TTGAATCTTGCTCTTGACATTGTCAATAGTATCAGAGGACTCAACCTCCAGGGTGATGGT 586005 Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||| || || | ||||||||||| |||||||| Sbjct 586006 TTTACCAGTTAAAGTCTTGACGAAGATCTGCAT 586038 Score = 161 bits (178), Expect = 2e-34 Identities = 154/197 (78%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 68265 GTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCG 68324 || || || || |||||||| |||||||| || || || |||||||||| ||||| || Sbjct 586070 GTAGATTCCTTCTGGATGTTGTAATCGGATAGAGTTCTTCCATCTTCTAGTTGCTTACCT 586129 Query 68325 GCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTG 68384 ||||| || | |||||||||||| |||||||| ||||| || ||||||||||| |||| Sbjct 586130 GCGAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCTTTATCTTGAATCTTGCTCTTG 586189 Query 68385 ACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTC 68444 || || || || || | || || || |||| |||||||||||| || || | ||| Sbjct 586190 ACATTGTCAATAGTATCAGAGGACTCAACCTCCAGGGTGATGGTTTTACCAGTTAAAGTC 586249 Query 68445 TTGACGAATATCTGCAT 68461 |||||||| |||||||| Sbjct 586250 TTGACGAAGATCTGCAT 586266 Score = 161 bits (178), Expect = 2e-34 Identities = 154/197 (78%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 68265 GTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCG 68324 || || || || |||||||| |||||||| || || || |||||||||| ||||| || Sbjct 586298 GTAGATTCCTTCTGGATGTTGTAATCGGATAGAGTTCTTCCATCTTCTAGTTGCTTACCT 586357 Query 68325 GCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTG 68384 ||||| || | |||||||||||| |||||||| ||||| || ||||||||||| |||| Sbjct 586358 GCGAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCTTTATCTTGAATCTTGCTCTTG 586417 Query 68385 ACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTC 68444 || || || || || | || || || |||| |||||||||||| || || | ||| Sbjct 586418 ACATTGTCAATAGTATCAGAGGACTCAACCTCCAGGGTGATGGTTTTACCAGTTAAAGTC 586477 Query 68445 TTGACGAATATCTGCAT 68461 |||||||| |||||||| Sbjct 586478 TTGACGAAGATCTGCAT 586494 Score = 161 bits (178), Expect = 2e-34 Identities = 154/197 (78%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 68265 GTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCG 68324 || || || || |||||||| |||||||| || || || |||||||||| ||||| || Sbjct 586526 GTAGATTCCTTCTGGATGTTGTAATCGGATAGAGTTCTTCCATCTTCTAGTTGCTTACCT 586585 Query 68325 GCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTG 68384 ||||| || | |||||||||||| |||||||| ||||| || ||||||||||| |||| Sbjct 586586 GCGAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCTTTATCTTGAATCTTGCTCTTG 586645 Query 68385 ACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTC 68444 || || || || || | || || || |||| |||||||||||| || || | ||| Sbjct 586646 ACATTGTCAATAGTATCAGAGGACTCAACCTCCAGGGTGATGGTTTTACCAGTTAAAGTC 586705 Query 68445 TTGACGAATATCTGCAT 68461 |||||||| |||||||| Sbjct 586706 TTGACGAAGATCTGCAT 586722 Score = 161 bits (178), Expect = 2e-34 Identities = 154/197 (78%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 68265 GTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCG 68324 || || || || |||||||| |||||||| || || || |||||||||| ||||| || Sbjct 586754 GTAGATTCCTTCTGGATGTTGTAATCGGATAGAGTTCTTCCATCTTCTAGTTGCTTACCT 586813 Query 68325 GCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTG 68384 ||||| || | |||||||||||| |||||||| ||||| || ||||||||||| |||| Sbjct 586814 GCGAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCTTTATCTTGAATCTTGCTCTTG 586873 Query 68385 ACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTC 68444 || || || || || | || || || |||| |||||||||||| || || | ||| Sbjct 586874 ACATTGTCAATAGTATCAGAGGACTCAACCTCCAGGGTGATGGTTTTACCAGTTAAAGTC 586933 Query 68445 TTGACGAATATCTGCAT 68461 |||||||| |||||||| Sbjct 586934 TTGACGAAGATCTGCAT 586950 Score = 161 bits (178), Expect = 2e-34 Identities = 160/207 (77%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 68265 GTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCG 68324 || || || || |||||||| |||||||| || || || |||||||||| ||||| || Sbjct 586982 GTAGATTCCTTCTGGATGTTGTAATCGGATAGAGTTCTTCCATCTTCTAGTTGCTTACCT 587041 Query 68325 GCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTG 68384 ||||| || | |||||||||||| |||||||| ||||| || ||||||||||| |||| Sbjct 587042 GCGAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCTTTATCTTGAATCTTGCTCTTG 587101 Query 68385 ACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTC 68444 || || || || || | || || || |||| |||||||||||| || || | ||| Sbjct 587102 ACATTGTCAATAGTATCAGAGGACTCAACCTCCAGGGTGATGGTTTTACCAGTTAAAGTC 587161 Query 68445 TTGACGAATATCTGCATTATGCTATTA 68471 ||||| || |||||||| |||| ||| Sbjct 587162 TTGACAAAAATCTGCATCCTGCTCTTA 587188 >seq8 Length=676247 Score = 161 bits (178), Expect = 2e-34 Identities = 161/209 (77%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 |||||||| | ||||| || ||||||||||| || || || | || || |||||||| Sbjct 115837 ACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACCATCTTCC 115896 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 || ||||| || || || || | |||||||||||| ||||| || || ||||||||||| Sbjct 115897 AATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCCTCCTTGTCTTGG 115956 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432 ||||| | |||||| || || ||||| | ||||| ||||||||||| || || || Sbjct 115957 ATCTTAGACTTGACATTGTCAATAGTGTCAGAAGATTCGACTTCCAAGGTAATAGTCTTA 116016 Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || | ||||||||||| || ||||| Sbjct 116017 CCGGTCAAAGTCTTGACGAAAATTTGCAT 116045 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921621754864320