Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F002214845.1_202017-07- 05] 56 sequences; 9,683,383 total letters Query= NC_008725.1 Length=111953 Score E Sequences producing significant alignments: (Bits) Value seq6 113 3e-20 >seq6 Length=935435 Score = 113 bits (124), Expect = 3e-20 Identities = 168/237 (71%), Gaps = 6/237 (3%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 ||||| || || | || || ||||| || |||||||| ||| |||| || || | Sbjct 585810 ATGCAGATCTTCGTCAAGACTTTAACTGGTAAAACCATCACCCTGGAGGTTGAGTCCTCT 585751 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGT---ACCTGTAAAC 21950 || || | | | || | ||| || ||| |||||||| ||| | ||||| || Sbjct 585750 GATACTATTGACAATGTCAAGAGCAAGATTCAAGATAAAGAAGGTATTCCACCTG---AC 585694 Query 21951 CAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTAC 22010 ||||| ||| | ||||| || || || |||||||||||| || |||| | |||||||| Sbjct 585693 CAACAAAGATTGATCTTCGCAGGTAAGCAACTAGAAGATGGAAGAACTCTATCCGATTAC 585634 Query 22011 AATATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGGATATTAA 22067 || || ||||||||||||||| | ||| |||| || | || || || || | |||| Sbjct 585633 AACATCCAGAAGGAATCTACTTTGCATCTGGTTTTGAGATTGCGTGGTGGTTGTTAA 585577 Score = 111 bits (122), Expect = 1e-19 Identities = 164/230 (71%), Gaps = 8/230 (3%) Strand=Plus/Minus Query 21819 AAGTAATAGTGCAAAATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTG 21878 |||||| || || ||||| || ||| | || || ||||| || |||||||| ||| || Sbjct 587191 AAGTAAGAG--CAGGATGCAGATTTTTGTCAAGACTTTAACTGGTAAAACCATCACCCTG 587134 Query 21879 GAAACGGAAGCCGCAGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGT 21938 || || || | || || | | | || | ||| || ||| |||||||| ||| Sbjct 587133 GAGGTTGAGTCCTCTGATACTATTGACAATGTCAAGAGCAAGATTCAAGATAAAGAAGGT 587074 Query 21939 GT---ACCTGTAAACCAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAA 21995 | ||||| ||||||| ||| | ||||| || || || |||||||||||| || | Sbjct 587073 ATTCCACCTG---ACCAACAAAGATTGATCTTCGCAGGTAAGCAACTAGAAGATGGAAGA 587017 Query 21996 ACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCATATGGTATT 22045 ||| | |||||||||| || ||||||||||||||| | ||| | || || Sbjct 587016 ACTCTATCCGATTACAACATCCAGAAGGAATCTACTTTGCATCTAGTTTT 586967 Score = 109 bits (120), Expect = 4e-19 Identities = 154/215 (72%), Gaps = 6/215 (3%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 ||||| || || | || || ||||| || |||||||| ||| |||| || || | Sbjct 586038 ATGCAGATCTTCGTCAAGACTTTAACTGGTAAAACCATCACCCTGGAGGTTGAGTCCTCT 585979 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGT---ACCTGTAAAC 21950 || || | | | || | ||| || ||| |||||||| ||| | ||||| || Sbjct 585978 GATACTATTGACAATGTCAAGAGCAAGATTCAAGATAAAGAAGGTATTCCACCTG---AC 585922 Query 21951 CAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTAC 22010 ||||| ||| | ||||| || || || |||||||||||| || |||| | |||||||| Sbjct 585921 CAACAAAGATTGATCTTCGCAGGTAAGCAACTAGAAGATGGAAGAACTCTATCCGATTAC 585862 Query 22011 AATATTCAGAAGGAATCTACTCTTCATATGGTATT 22045 || || ||||||||||||||| | ||| |||| || Sbjct 585861 AACATCCAGAAGGAATCTACTTTGCATCTGGTTTT 585827 Score = 105 bits (116), Expect = 5e-18 Identities = 153/215 (71%), Gaps = 6/215 (3%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 ||||| || || | || || ||||| || |||||||| ||| |||| || || | Sbjct 586266 ATGCAGATCTTCGTCAAGACTTTAACTGGTAAAACCATCACCCTGGAGGTTGAGTCCTCT 586207 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGT---ACCTGTAAAC 21950 || || | | | || | ||| || ||| |||||||| ||| | ||||| || Sbjct 586206 GATACTATTGACAATGTCAAGAGCAAGATTCAAGATAAAGAAGGTATTCCACCTG---AC 586150 Query 21951 CAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTAC 22010 ||||| ||| | ||||| || || || |||||||||||| || |||| | |||||||| Sbjct 586149 CAACAAAGATTGATCTTCGCAGGTAAGCAACTAGAAGATGGAAGAACTCTATCCGATTAC 586090 Query 22011 AATATTCAGAAGGAATCTACTCTTCATATGGTATT 22045 || || ||||||||||||||| | ||| | || || Sbjct 586089 AACATCCAGAAGGAATCTACTTTGCATCTAGTTTT 586055 Score = 105 bits (116), Expect = 5e-18 Identities = 153/215 (71%), Gaps = 6/215 (3%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 ||||| || || | || || ||||| || |||||||| ||| |||| || || | Sbjct 586494 ATGCAGATCTTCGTCAAGACTTTAACTGGTAAAACCATCACCCTGGAGGTTGAGTCCTCT 586435 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGT---ACCTGTAAAC 21950 || || | | | || | ||| || ||| |||||||| ||| | ||||| || Sbjct 586434 GATACTATTGACAATGTCAAGAGCAAGATTCAAGATAAAGAAGGTATTCCACCTG---AC 586378 Query 21951 CAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTAC 22010 ||||| ||| | ||||| || || || |||||||||||| || |||| | |||||||| Sbjct 586377 CAACAAAGATTGATCTTCGCAGGTAAGCAACTAGAAGATGGAAGAACTCTATCCGATTAC 586318 Query 22011 AATATTCAGAAGGAATCTACTCTTCATATGGTATT 22045 || || ||||||||||||||| | ||| | || || Sbjct 586317 AACATCCAGAAGGAATCTACTTTGCATCTAGTTTT 586283 Score = 105 bits (116), Expect = 5e-18 Identities = 153/215 (71%), Gaps = 6/215 (3%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 ||||| || || | || || ||||| || |||||||| ||| |||| || || | Sbjct 586722 ATGCAGATCTTCGTCAAGACTTTAACTGGTAAAACCATCACCCTGGAGGTTGAGTCCTCT 586663 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGT---ACCTGTAAAC 21950 || || | | | || | ||| || ||| |||||||| ||| | ||||| || Sbjct 586662 GATACTATTGACAATGTCAAGAGCAAGATTCAAGATAAAGAAGGTATTCCACCTG---AC 586606 Query 21951 CAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTAC 22010 ||||| ||| | ||||| || || || |||||||||||| || |||| | |||||||| Sbjct 586605 CAACAAAGATTGATCTTCGCAGGTAAGCAACTAGAAGATGGAAGAACTCTATCCGATTAC 586546 Query 22011 AATATTCAGAAGGAATCTACTCTTCATATGGTATT 22045 || || ||||||||||||||| | ||| | || || Sbjct 586545 AACATCCAGAAGGAATCTACTTTGCATCTAGTTTT 586511 Score = 105 bits (116), Expect = 5e-18 Identities = 153/215 (71%), Gaps = 6/215 (3%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 ||||| || || | || || ||||| || |||||||| ||| |||| || || | Sbjct 586950 ATGCAGATCTTCGTCAAGACTTTAACTGGTAAAACCATCACCCTGGAGGTTGAGTCCTCT 586891 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGT---ACCTGTAAAC 21950 || || | | | || | ||| || ||| |||||||| ||| | ||||| || Sbjct 586890 GATACTATTGACAATGTCAAGAGCAAGATTCAAGATAAAGAAGGTATTCCACCTG---AC 586834 Query 21951 CAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTAC 22010 ||||| ||| | ||||| || || || |||||||||||| || |||| | |||||||| Sbjct 586833 CAACAAAGATTGATCTTCGCAGGTAAGCAACTAGAAGATGGAAGAACTCTATCCGATTAC 586774 Query 22011 AATATTCAGAAGGAATCTACTCTTCATATGGTATT 22045 || || ||||||||||||||| | ||| | || || Sbjct 586773 AACATCCAGAAGGAATCTACTTTGCATCTAGTTTT 586739 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 358124555579824