Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F002214845.1_202017-07-
05] 56 sequences; 9,683,383 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq6 116 9e-21
seq2 100 7e-16
seq8 98.7 2e-15
>seq6
Length=935435
Score = 116 bits (128), Expect = 9e-21
Identities = 164/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| || | ||| | || ||||| | || ||| || ||||| || || ||||
Sbjct 585584 CCACCACGCAATCTCAAAACCAGATGCAAAGTAGATTCCTTCTGGATGTTGTAATCGGAT 585643
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| || | ||| ||||||| ||| || ||||||||||||| | ||||| | |||
Sbjct 585644 AGAGTTCTTCCATCTTCTAGTTGCTTACCTGCGAAGATCAATCTTTGTTGGTCAGGTGGA 585703
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425
|| ||||||||||| || || || ||| || || || || |||| ||| || || ||
Sbjct 585704 ATACCTTCTTTATCTTGAATCTT-GCTCTTGACATTGTCAATAGTATCAGAGGACTCAAC 585762
Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || ||||| || || || || | |||||||||||| ||||||||
Sbjct 585763 CTCCAGGGTGATGGTTTTACCAGTTAAAGTCTTGACGAAGATCTGCAT 585810
Score = 116 bits (128), Expect = 9e-21
Identities = 164/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| || | ||| | || ||||| | || ||| || ||||| || || ||||
Sbjct 585812 CCACCACGCAATCTCAAAACCAGATGCAAAGTAGATTCCTTCTGGATGTTGTAATCGGAT 585871
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| || | ||| ||||||| ||| || ||||||||||||| | ||||| | |||
Sbjct 585872 AGAGTTCTTCCATCTTCTAGTTGCTTACCTGCGAAGATCAATCTTTGTTGGTCAGGTGGA 585931
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425
|| ||||||||||| || || || ||| || || || || |||| ||| || || ||
Sbjct 585932 ATACCTTCTTTATCTTGAATCTT-GCTCTTGACATTGTCAATAGTATCAGAGGACTCAAC 585990
Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || ||||| || || || || | |||||||||||| ||||||||
Sbjct 585991 CTCCAGGGTGATGGTTTTACCAGTTAAAGTCTTGACGAAGATCTGCAT 586038
Score = 116 bits (128), Expect = 9e-21
Identities = 164/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| || | ||| | || ||||| | || ||| || ||||| || || ||||
Sbjct 586040 CCACCACGCAATCTCAAAACTAGATGCAAAGTAGATTCCTTCTGGATGTTGTAATCGGAT 586099
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| || | ||| ||||||| ||| || ||||||||||||| | ||||| | |||
Sbjct 586100 AGAGTTCTTCCATCTTCTAGTTGCTTACCTGCGAAGATCAATCTTTGTTGGTCAGGTGGA 586159
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425
|| ||||||||||| || || || ||| || || || || |||| ||| || || ||
Sbjct 586160 ATACCTTCTTTATCTTGAATCTT-GCTCTTGACATTGTCAATAGTATCAGAGGACTCAAC 586218
Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || ||||| || || || || | |||||||||||| ||||||||
Sbjct 586219 CTCCAGGGTGATGGTTTTACCAGTTAAAGTCTTGACGAAGATCTGCAT 586266
Score = 116 bits (128), Expect = 9e-21
Identities = 164/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| || | ||| | || ||||| | || ||| || ||||| || || ||||
Sbjct 586268 CCACCACGCAATCTCAAAACTAGATGCAAAGTAGATTCCTTCTGGATGTTGTAATCGGAT 586327
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| || | ||| ||||||| ||| || ||||||||||||| | ||||| | |||
Sbjct 586328 AGAGTTCTTCCATCTTCTAGTTGCTTACCTGCGAAGATCAATCTTTGTTGGTCAGGTGGA 586387
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425
|| ||||||||||| || || || ||| || || || || |||| ||| || || ||
Sbjct 586388 ATACCTTCTTTATCTTGAATCTT-GCTCTTGACATTGTCAATAGTATCAGAGGACTCAAC 586446
Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || ||||| || || || || | |||||||||||| ||||||||
Sbjct 586447 CTCCAGGGTGATGGTTTTACCAGTTAAAGTCTTGACGAAGATCTGCAT 586494
Score = 116 bits (128), Expect = 9e-21
Identities = 164/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| || | ||| | || ||||| | || ||| || ||||| || || ||||
Sbjct 586496 CCACCACGCAATCTCAAAACTAGATGCAAAGTAGATTCCTTCTGGATGTTGTAATCGGAT 586555
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| || | ||| ||||||| ||| || ||||||||||||| | ||||| | |||
Sbjct 586556 AGAGTTCTTCCATCTTCTAGTTGCTTACCTGCGAAGATCAATCTTTGTTGGTCAGGTGGA 586615
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425
|| ||||||||||| || || || ||| || || || || |||| ||| || || ||
Sbjct 586616 ATACCTTCTTTATCTTGAATCTT-GCTCTTGACATTGTCAATAGTATCAGAGGACTCAAC 586674
Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || ||||| || || || || | |||||||||||| ||||||||
Sbjct 586675 CTCCAGGGTGATGGTTTTACCAGTTAAAGTCTTGACGAAGATCTGCAT 586722
Score = 116 bits (128), Expect = 9e-21
Identities = 164/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| || | ||| | || ||||| | || ||| || ||||| || || ||||
Sbjct 586724 CCACCACGCAATCTCAAAACTAGATGCAAAGTAGATTCCTTCTGGATGTTGTAATCGGAT 586783
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| || | ||| ||||||| ||| || ||||||||||||| | ||||| | |||
Sbjct 586784 AGAGTTCTTCCATCTTCTAGTTGCTTACCTGCGAAGATCAATCTTTGTTGGTCAGGTGGA 586843
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425
|| ||||||||||| || || || ||| || || || || |||| ||| || || ||
Sbjct 586844 ATACCTTCTTTATCTTGAATCTT-GCTCTTGACATTGTCAATAGTATCAGAGGACTCAAC 586902
Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || ||||| || || || || | |||||||||||| ||||||||
Sbjct 586903 CTCCAGGGTGATGGTTTTACCAGTTAAAGTCTTGACGAAGATCTGCAT 586950
Score = 111 bits (122), Expect = 4e-19
Identities = 163/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| || | ||| | || ||||| | || ||| || ||||| || || ||||
Sbjct 586952 CCACCACGCAATCTCAAAACTAGATGCAAAGTAGATTCCTTCTGGATGTTGTAATCGGAT 587011
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| || | ||| ||||||| ||| || ||||||||||||| | ||||| | |||
Sbjct 587012 AGAGTTCTTCCATCTTCTAGTTGCTTACCTGCGAAGATCAATCTTTGTTGGTCAGGTGGA 587071
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425
|| ||||||||||| || || || ||| || || || || |||| ||| || || ||
Sbjct 587072 ATACCTTCTTTATCTTGAATCTT-GCTCTTGACATTGTCAATAGTATCAGAGGACTCAAC 587130
Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || ||||| || || || || | ||||||||| || ||||||||
Sbjct 587131 CTCCAGGGTGATGGTTTTACCAGTTAAAGTCTTGACAAAAATCTGCAT 587178
>seq2
Length=1385486
Score = 100 bits (110), Expect = 7e-16
Identities = 132/183 (72%), Gaps = 0/183 (0%)
Strand=Plus/Plus
Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341
||| |||||||| || ||||||| | || | |||||||| ||||| || || || ||
Sbjct 975444 TTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACCGTCTTCCAATTGCTTACCAGCAAA 975503
Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401
||||| | ||||| | |||||| ||||| || || || || || | || || ||
Sbjct 975504 GATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTGTCTTGAATCTTTGACTTGACATT 975563
Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461
|| |||| || ||||| ||||| | ||||| ||||| || |||| |||||||||
Sbjct 975564 GTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGAC 975623
Query 288462 GAA 288464
|||
Sbjct 975624 GAA 975626
>seq8
Length=676247
Score = 98.7 bits (108), Expect = 2e-15
Identities = 137/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341
||| |||||||| || ||||| | | || | || ||||| ||||| || || || ||
Sbjct 115854 TTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACCATCTTCCAATTGCTTACCAGCAAA 115913
Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401
||||| | ||||| | |||||| || || || || ||||| || | || || ||
Sbjct 115914 GATCAATCTTTGTTGGTCAGGTGGGATACCCTCCTTGTCTTGGATCTTAGACTTGACATT 115973
Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461
|| |||| || ||||| ||||| | || || ||||| ||||||| |||||||||
Sbjct 115974 GTCAATAGTGTCAGAAGATTCGACTTCCAAGGTAATAGTCTTACCGGTCAAAGTCTTGAC 116033
Query 288462 GAATATCTGCAT 288473
||| || |||||
Sbjct 116034 GAAAATTTGCAT 116045
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179653553597968
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |