Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F002214845.1_202017-07-
05] 56 sequences; 9,683,383 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq6 93.3 4e-14
seq2 82.4 8e-11
>seq6
Length=935435
Score = 93.3 bits (102), Expect = 4e-14
Identities = 160/229 (70%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| || ||||| | |||||||| ||| | | || ||||| || |||||||| |||
Sbjct 586952 CCACCACGCAATCTCAAAACTAGATGCAAAGTAGATTCCTTCTGGATGTTGTAATCGGAT 587011
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| ||| | || || ||||| ||||| | |||| | | |||||||| || ||
Sbjct 587012 AGAGTTCTTCCATCTTCTAGTTGCTTACCTGCGAAGATCAATCTTTGTTGGTCAGGTGGA 587071
Query 138508 ATACCTTCTTTGTCGGTGATTTTT--TGTTTTAATTGTTCCACGGTGTCGGTCGACTCCA 138565
||||||||||| || ||| | || | || |||| || | || || | ||||| |
Sbjct 587072 ATACCTTCTTTATC-TTGAATCTTGCTCTTGACATTG-TCAATAGTATCAGAGGACTCAA 587129
Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|||| | || | ||||||||||| | ||| || ||||||||||||||
Sbjct 587130 CCTCCAGGGTGATGGTTTTACCAGTTAAAGTCTTGACAAAAATCTGCAT 587178
Score = 84.2 bits (92), Expect = 2e-11
Identities = 158/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| || ||||| | |||||||| ||| | | || ||||| || |||||||| |||
Sbjct 586040 CCACCACGCAATCTCAAAACTAGATGCAAAGTAGATTCCTTCTGGATGTTGTAATCGGAT 586099
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| ||| | || || ||||| ||||| | |||| | | |||||||| || ||
Sbjct 586100 AGAGTTCTTCCATCTTCTAGTTGCTTACCTGCGAAGATCAATCTTTGTTGGTCAGGTGGA 586159
Query 138508 ATACCTTCTTTGTCGGTGATTTTT--TGTTTTAATTGTTCCACGGTGTCGGTCGACTCCA 138565
||||||||||| || ||| | || | || |||| || | || || | ||||| |
Sbjct 586160 ATACCTTCTTTATC-TTGAATCTTGCTCTTGACATTG-TCAATAGTATCAGAGGACTCAA 586217
Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|||| | || | ||||||||||| | ||| || || || ||||||||
Sbjct 586218 CCTCCAGGGTGATGGTTTTACCAGTTAAAGTCTTGACGAAGATCTGCAT 586266
Score = 84.2 bits (92), Expect = 2e-11
Identities = 158/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| || ||||| | |||||||| ||| | | || ||||| || |||||||| |||
Sbjct 586268 CCACCACGCAATCTCAAAACTAGATGCAAAGTAGATTCCTTCTGGATGTTGTAATCGGAT 586327
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| ||| | || || ||||| ||||| | |||| | | |||||||| || ||
Sbjct 586328 AGAGTTCTTCCATCTTCTAGTTGCTTACCTGCGAAGATCAATCTTTGTTGGTCAGGTGGA 586387
Query 138508 ATACCTTCTTTGTCGGTGATTTTT--TGTTTTAATTGTTCCACGGTGTCGGTCGACTCCA 138565
||||||||||| || ||| | || | || |||| || | || || | ||||| |
Sbjct 586388 ATACCTTCTTTATC-TTGAATCTTGCTCTTGACATTG-TCAATAGTATCAGAGGACTCAA 586445
Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|||| | || | ||||||||||| | ||| || || || ||||||||
Sbjct 586446 CCTCCAGGGTGATGGTTTTACCAGTTAAAGTCTTGACGAAGATCTGCAT 586494
Score = 84.2 bits (92), Expect = 2e-11
Identities = 158/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| || ||||| | |||||||| ||| | | || ||||| || |||||||| |||
Sbjct 586496 CCACCACGCAATCTCAAAACTAGATGCAAAGTAGATTCCTTCTGGATGTTGTAATCGGAT 586555
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| ||| | || || ||||| ||||| | |||| | | |||||||| || ||
Sbjct 586556 AGAGTTCTTCCATCTTCTAGTTGCTTACCTGCGAAGATCAATCTTTGTTGGTCAGGTGGA 586615
Query 138508 ATACCTTCTTTGTCGGTGATTTTT--TGTTTTAATTGTTCCACGGTGTCGGTCGACTCCA 138565
||||||||||| || ||| | || | || |||| || | || || | ||||| |
Sbjct 586616 ATACCTTCTTTATC-TTGAATCTTGCTCTTGACATTG-TCAATAGTATCAGAGGACTCAA 586673
Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|||| | || | ||||||||||| | ||| || || || ||||||||
Sbjct 586674 CCTCCAGGGTGATGGTTTTACCAGTTAAAGTCTTGACGAAGATCTGCAT 586722
Score = 84.2 bits (92), Expect = 2e-11
Identities = 158/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| || ||||| | |||||||| ||| | | || ||||| || |||||||| |||
Sbjct 586724 CCACCACGCAATCTCAAAACTAGATGCAAAGTAGATTCCTTCTGGATGTTGTAATCGGAT 586783
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| ||| | || || ||||| ||||| | |||| | | |||||||| || ||
Sbjct 586784 AGAGTTCTTCCATCTTCTAGTTGCTTACCTGCGAAGATCAATCTTTGTTGGTCAGGTGGA 586843
Query 138508 ATACCTTCTTTGTCGGTGATTTTT--TGTTTTAATTGTTCCACGGTGTCGGTCGACTCCA 138565
||||||||||| || ||| | || | || |||| || | || || | ||||| |
Sbjct 586844 ATACCTTCTTTATC-TTGAATCTTGCTCTTGACATTG-TCAATAGTATCAGAGGACTCAA 586901
Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|||| | || | ||||||||||| | ||| || || || ||||||||
Sbjct 586902 CCTCCAGGGTGATGGTTTTACCAGTTAAAGTCTTGACGAAGATCTGCAT 586950
>seq2
Length=1385486
Score = 82.4 bits (90), Expect = 8e-11
Identities = 153/221 (69%), Gaps = 4/221 (2%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| |||| ||| | | ||| || |||| | || |||||||| |||||||||||| |
Sbjct 975409 CCACCTCTCAATCTTAGAACCAAGTGTAGAGTGGATTCCTTTTGGATGTTGTAGTCGGAC 975468
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| ||| | ||| || | ||| ||||| | | |||| | | |||||||| || ||
Sbjct 975469 AAAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 975528
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG--TTTTAATTGTTCCACGGTGTCGGTCGACTCCA 138565
|||||||| ||||| ||| | |||| || |||| || | ||||| | || || |
Sbjct 975529 ATACCTTCCTTGTC-TTGAATCTTTGACTTGACATTG-TCAATAGTGTCAGAAGATTCAA 975586
Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAA 138606
| || | || | || |||||||||| ||| || || |||
Sbjct 975587 CTTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACGAAA 975627
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496262052616320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |