Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F002214845.1_202017-07- 05] 56 sequences; 9,683,383 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq6 143 2e-29 seq2 120 2e-22 seq8 113 3e-20 >seq6 Length=935435 Score = 143 bits (158), Expect = 2e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||| |||||||| ||||||| ||| | ||||| || || || |||||||||||| Sbjct 586952 CCACCACGCAATCTCAAAACTAGATGCAAAGTAGATTCCTTCTGGATGTTGTAATCGGAT 587011 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 ||| |||| | ||||||| ||| || || ||| | ||||| | |||||||| |||| Sbjct 587012 AGAGTTCTTCCATCTTCTAGTTGCTTACCTGCGAAGATCAATCTTTGTTGGTCAGGTGGA 587071 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || ||||| || || ||| ||||| || ||| | || |||||||| || || Sbjct 587072 ATACCTTCTTTATCTTGAATCTTGCTCTTGACATTGTCAATAGTATCAGAGGACTCAACC 587131 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || | ||| ||||||||||| || | ||| || |||||||| ||||| Sbjct 587132 TCCAGGGTGATGGTTTTACCAGTTAAAGTCTTGACAAAAATCTGCAT 587178 Score = 136 bits (150), Expect = 3e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||| |||||||| ||||||| ||| | ||||| || || || |||||||||||| Sbjct 586040 CCACCACGCAATCTCAAAACTAGATGCAAAGTAGATTCCTTCTGGATGTTGTAATCGGAT 586099 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 ||| |||| | ||||||| ||| || || ||| | ||||| | |||||||| |||| Sbjct 586100 AGAGTTCTTCCATCTTCTAGTTGCTTACCTGCGAAGATCAATCTTTGTTGGTCAGGTGGA 586159 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || ||||| || || ||| ||||| || ||| | || |||||||| || || Sbjct 586160 ATACCTTCTTTATCTTGAATCTTGCTCTTGACATTGTCAATAGTATCAGAGGACTCAACC 586219 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || | ||| ||||||||||| || | ||| || || || || |||||| Sbjct 586220 TCCAGGGTGATGGTTTTACCAGTTAAAGTCTTGACGAAGATCTGCATA 586267 Score = 136 bits (150), Expect = 3e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||| |||||||| ||||||| ||| | ||||| || || || |||||||||||| Sbjct 586268 CCACCACGCAATCTCAAAACTAGATGCAAAGTAGATTCCTTCTGGATGTTGTAATCGGAT 586327 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 ||| |||| | ||||||| ||| || || ||| | ||||| | |||||||| |||| Sbjct 586328 AGAGTTCTTCCATCTTCTAGTTGCTTACCTGCGAAGATCAATCTTTGTTGGTCAGGTGGA 586387 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || ||||| || || ||| ||||| || ||| | || |||||||| || || Sbjct 586388 ATACCTTCTTTATCTTGAATCTTGCTCTTGACATTGTCAATAGTATCAGAGGACTCAACC 586447 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || | ||| ||||||||||| || | ||| || || || || |||||| Sbjct 586448 TCCAGGGTGATGGTTTTACCAGTTAAAGTCTTGACGAAGATCTGCATA 586495 Score = 136 bits (150), Expect = 3e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||| |||||||| ||||||| ||| | ||||| || || || |||||||||||| Sbjct 586496 CCACCACGCAATCTCAAAACTAGATGCAAAGTAGATTCCTTCTGGATGTTGTAATCGGAT 586555 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 ||| |||| | ||||||| ||| || || ||| | ||||| | |||||||| |||| Sbjct 586556 AGAGTTCTTCCATCTTCTAGTTGCTTACCTGCGAAGATCAATCTTTGTTGGTCAGGTGGA 586615 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || ||||| || || ||| ||||| || ||| | || |||||||| || || Sbjct 586616 ATACCTTCTTTATCTTGAATCTTGCTCTTGACATTGTCAATAGTATCAGAGGACTCAACC 586675 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || | ||| ||||||||||| || | ||| || || || || |||||| Sbjct 586676 TCCAGGGTGATGGTTTTACCAGTTAAAGTCTTGACGAAGATCTGCATA 586723 Score = 136 bits (150), Expect = 3e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||| |||||||| ||||||| ||| | ||||| || || || |||||||||||| Sbjct 586724 CCACCACGCAATCTCAAAACTAGATGCAAAGTAGATTCCTTCTGGATGTTGTAATCGGAT 586783 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 ||| |||| | ||||||| ||| || || ||| | ||||| | |||||||| |||| Sbjct 586784 AGAGTTCTTCCATCTTCTAGTTGCTTACCTGCGAAGATCAATCTTTGTTGGTCAGGTGGA 586843 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || ||||| || || ||| ||||| || ||| | || |||||||| || || Sbjct 586844 ATACCTTCTTTATCTTGAATCTTGCTCTTGACATTGTCAATAGTATCAGAGGACTCAACC 586903 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || | ||| ||||||||||| || | ||| || || || || |||||| Sbjct 586904 TCCAGGGTGATGGTTTTACCAGTTAAAGTCTTGACGAAGATCTGCATA 586951 Score = 132 bits (146), Expect = 3e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||| |||||||| ||||| | ||| | ||||| || || || |||||||||||| Sbjct 585584 CCACCACGCAATCTCAAAACCAGATGCAAAGTAGATTCCTTCTGGATGTTGTAATCGGAT 585643 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 ||| |||| | ||||||| ||| || || ||| | ||||| | |||||||| |||| Sbjct 585644 AGAGTTCTTCCATCTTCTAGTTGCTTACCTGCGAAGATCAATCTTTGTTGGTCAGGTGGA 585703 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || ||||| || || ||| ||||| || ||| | || |||||||| || || Sbjct 585704 ATACCTTCTTTATCTTGAATCTTGCTCTTGACATTGTCAATAGTATCAGAGGACTCAACC 585763 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || | ||| ||||||||||| || | ||| || || || || |||||| Sbjct 585764 TCCAGGGTGATGGTTTTACCAGTTAAAGTCTTGACGAAGATCTGCATA 585811 Score = 132 bits (146), Expect = 3e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||| |||||||| ||||| | ||| | ||||| || || || |||||||||||| Sbjct 585812 CCACCACGCAATCTCAAAACCAGATGCAAAGTAGATTCCTTCTGGATGTTGTAATCGGAT 585871 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 ||| |||| | ||||||| ||| || || ||| | ||||| | |||||||| |||| Sbjct 585872 AGAGTTCTTCCATCTTCTAGTTGCTTACCTGCGAAGATCAATCTTTGTTGGTCAGGTGGA 585931 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || ||||| || || ||| ||||| || ||| | || |||||||| || || Sbjct 585932 ATACCTTCTTTATCTTGAATCTTGCTCTTGACATTGTCAATAGTATCAGAGGACTCAACC 585991 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || | ||| ||||||||||| || | ||| || || || || |||||| Sbjct 585992 TCCAGGGTGATGGTTTTACCAGTTAAAGTCTTGACGAAGATCTGCATA 586039 >seq2 Length=1385486 Score = 120 bits (132), Expect = 2e-22 Identities = 158/219 (72%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||||| |||||||| ||| || || || || || || ||||| |||||||| ||| Sbjct 975409 CCACCTCTCAATCTTAGAACCAAGTGTAGAGTGGATTCCTTTTGGATGTTGTAGTCGGAC 975468 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 | | |||| ||||||| ||||| || ||||| | ||||| | |||||||| ||| Sbjct 975469 AAAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 975528 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || ||||||||||| ||| || || ||| | || ||||| || | ||| || Sbjct 975529 ATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACT 975588 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAA 15168 || || || ||||| ||||| |||| ||| || || ||| Sbjct 975589 TCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACGAAA 975627 >seq8 Length=676247 Score = 113 bits (124), Expect = 3e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||||| |||||||| || || || | || || || ||||| |||||||| || Sbjct 115819 CCACCTCTCAATCTTAGGACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCAGAC 115878 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 | | |||| | ||||| ||||| || ||||| | ||||| | |||||||| ||| Sbjct 115879 AAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 115938 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || || |||||||| || || || ||| | || ||||| || | ||| || Sbjct 115939 ATACCCTCCTTGTCTTGGATCTTAGACTTGACATTGTCAATAGTGTCAGAAGATTCGACT 115998 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATT 15179 || |||||||| || ||||| |||| ||| || || ||||||||||| || Sbjct 115999 TCCAAGGTAATAGTCTTACCGGTCAAAGTCTTGACGAAAATTTGCATCTT 116048 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357391756079960