Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F002214845.1_202017-07-
05] 56 sequences; 9,683,383 total letters
Query= NC_013772.1
Length=176677
Score E
Sequences producing significant alignments: (Bits) Value
seq6 87.8 2e-12
>seq6
Length=935435
Score = 87.8 bits (96), Expect = 2e-12
Identities = 147/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 46381 CAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTC 46440
||| ||||||||||| ||| ||||| ||||| ||||| ||||||||||| | | ||
Sbjct 585598 CAAAACCAGATGCAAAGTAGATTCCTTCTGGATGTTGTAATCGGATAGAGTTCTTCCATC 585657
Query 46441 GTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 46500
|| || ||||| || ||||| ||||| | || ||||| | || | | || || ||
Sbjct 585658 TTCTAGTTGCTTACCTGCGAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCTTTATC 585717
Query 46501 CATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGT 46560
||||| |||||| | | | || || || || || |||| ||||||||
Sbjct 585718 TTGAATCTTGCTCTTGACATTGTCAATAGTATCAGAGGACTCAACCTCCAGGGTGATGGT 585777
Query 46561 TTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
||| || || | || || || ||||| |||||
Sbjct 585778 TTTACCAGTTAAAGTCTTGACGAAGATCTGCAT 585810
Score = 87.8 bits (96), Expect = 2e-12
Identities = 147/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 46381 CAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTC 46440
||| ||||||||||| ||| ||||| ||||| ||||| ||||||||||| | | ||
Sbjct 585826 CAAAACCAGATGCAAAGTAGATTCCTTCTGGATGTTGTAATCGGATAGAGTTCTTCCATC 585885
Query 46441 GTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 46500
|| || ||||| || ||||| ||||| | || ||||| | || | | || || ||
Sbjct 585886 TTCTAGTTGCTTACCTGCGAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCTTTATC 585945
Query 46501 CATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGT 46560
||||| |||||| | | | || || || || || |||| ||||||||
Sbjct 585946 TTGAATCTTGCTCTTGACATTGTCAATAGTATCAGAGGACTCAACCTCCAGGGTGATGGT 586005
Query 46561 TTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
||| || || | || || || ||||| |||||
Sbjct 586006 TTTACCAGTTAAAGTCTTGACGAAGATCTGCAT 586038
Score = 82.4 bits (90), Expect = 9e-11
Identities = 146/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 46381 CAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTC 46440
||| || |||||||| ||| ||||| ||||| ||||| ||||||||||| | | ||
Sbjct 586054 CAAAACTAGATGCAAAGTAGATTCCTTCTGGATGTTGTAATCGGATAGAGTTCTTCCATC 586113
Query 46441 GTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 46500
|| || ||||| || ||||| ||||| | || ||||| | || | | || || ||
Sbjct 586114 TTCTAGTTGCTTACCTGCGAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCTTTATC 586173
Query 46501 CATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGT 46560
||||| |||||| | | | || || || || || |||| ||||||||
Sbjct 586174 TTGAATCTTGCTCTTGACATTGTCAATAGTATCAGAGGACTCAACCTCCAGGGTGATGGT 586233
Query 46561 TTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
||| || || | || || || ||||| |||||
Sbjct 586234 TTTACCAGTTAAAGTCTTGACGAAGATCTGCAT 586266
Score = 82.4 bits (90), Expect = 9e-11
Identities = 146/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 46381 CAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTC 46440
||| || |||||||| ||| ||||| ||||| ||||| ||||||||||| | | ||
Sbjct 586282 CAAAACTAGATGCAAAGTAGATTCCTTCTGGATGTTGTAATCGGATAGAGTTCTTCCATC 586341
Query 46441 GTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 46500
|| || ||||| || ||||| ||||| | || ||||| | || | | || || ||
Sbjct 586342 TTCTAGTTGCTTACCTGCGAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCTTTATC 586401
Query 46501 CATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGT 46560
||||| |||||| | | | || || || || || |||| ||||||||
Sbjct 586402 TTGAATCTTGCTCTTGACATTGTCAATAGTATCAGAGGACTCAACCTCCAGGGTGATGGT 586461
Query 46561 TTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
||| || || | || || || ||||| |||||
Sbjct 586462 TTTACCAGTTAAAGTCTTGACGAAGATCTGCAT 586494
Score = 82.4 bits (90), Expect = 9e-11
Identities = 146/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 46381 CAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTC 46440
||| || |||||||| ||| ||||| ||||| ||||| ||||||||||| | | ||
Sbjct 586510 CAAAACTAGATGCAAAGTAGATTCCTTCTGGATGTTGTAATCGGATAGAGTTCTTCCATC 586569
Query 46441 GTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 46500
|| || ||||| || ||||| ||||| | || ||||| | || | | || || ||
Sbjct 586570 TTCTAGTTGCTTACCTGCGAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCTTTATC 586629
Query 46501 CATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGT 46560
||||| |||||| | | | || || || || || |||| ||||||||
Sbjct 586630 TTGAATCTTGCTCTTGACATTGTCAATAGTATCAGAGGACTCAACCTCCAGGGTGATGGT 586689
Query 46561 TTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
||| || || | || || || ||||| |||||
Sbjct 586690 TTTACCAGTTAAAGTCTTGACGAAGATCTGCAT 586722
Score = 82.4 bits (90), Expect = 9e-11
Identities = 146/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 46381 CAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTC 46440
||| || |||||||| ||| ||||| ||||| ||||| ||||||||||| | | ||
Sbjct 586738 CAAAACTAGATGCAAAGTAGATTCCTTCTGGATGTTGTAATCGGATAGAGTTCTTCCATC 586797
Query 46441 GTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 46500
|| || ||||| || ||||| ||||| | || ||||| | || | | || || ||
Sbjct 586798 TTCTAGTTGCTTACCTGCGAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCTTTATC 586857
Query 46501 CATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGT 46560
||||| |||||| | | | || || || || || |||| ||||||||
Sbjct 586858 TTGAATCTTGCTCTTGACATTGTCAATAGTATCAGAGGACTCAACCTCCAGGGTGATGGT 586917
Query 46561 TTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
||| || || | || || || ||||| |||||
Sbjct 586918 TTTACCAGTTAAAGTCTTGACGAAGATCTGCAT 586950
Score = 82.4 bits (90), Expect = 9e-11
Identities = 146/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 46381 CAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTC 46440
||| || |||||||| ||| ||||| ||||| ||||| ||||||||||| | | ||
Sbjct 586966 CAAAACTAGATGCAAAGTAGATTCCTTCTGGATGTTGTAATCGGATAGAGTTCTTCCATC 587025
Query 46441 GTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 46500
|| || ||||| || ||||| ||||| | || ||||| | || | | || || ||
Sbjct 587026 TTCTAGTTGCTTACCTGCGAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCTTTATC 587085
Query 46501 CATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGT 46560
||||| |||||| | | | || || || || || |||| ||||||||
Sbjct 587086 TTGAATCTTGCTCTTGACATTGTCAATAGTATCAGAGGACTCAACCTCCAGGGTGATGGT 587145
Query 46561 TTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
||| || || | || || ||||| || |||||
Sbjct 587146 TTTACCAGTTAAAGTCTTGACAAAAATCTGCAT 587178
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 565238004333120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |