Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F002214845.1_202017-07- 05] 56 sequences; 9,683,383 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq7 306 4e-78 seq1 118 1e-21 >seq7 Length=810710 Score = 306 bits (338), Expect = 4e-78 Identities = 909/1389 (65%), Gaps = 35/1389 (3%) Strand=Plus/Plus Query 105947 GTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATT 106006 ||||| || || || || || || | ||| | || || | || || || ||||||||| Sbjct 326695 GTGTATGGCTCGAAACACTCGTTGTAACCTAGAATCTGGGAAGTCGACGCAGTTGGCATT 326754 Query 106007 GGTGCCATCA--AAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCCTTGAGAACAT 106064 || |||| | ||||| ||| | || ||| | ||||||||||| || ||| | | | Sbjct 326755 GGGGCCAATAGCAAAGA--GTTTCTAACACCATATTCCTTGATGCTTTTCTTCAAAGTGT 326812 Query 106065 CCCAGTCGTAGTTGAGCT--TGGTTTCACCTTCCCACATATCAAATTGAAGCACCCCTTG 106122 |||| || | | || | |||||| |||| ||| ||| | || | | ||||| Sbjct 326813 CCCAATCCCA-TAGATCCGATGGTTTGGTGTTCC-ACAGATCGTACTGCAAAATACCTTG 326870 Query 106123 GGACGTGGGAGAACCCTCAAATGTCTCATAGG----AACCTTGGGCTTCAGCCAATTCAC 106178 || | |||||||| ||| | || || | | |||| |||| ||||| |||| Sbjct 326871 AGAGATTGGAGAACCTTCATAAGTGGAGTAAGGTCCATCCTT---CTTC-GCCAACTCAC 326926 Query 106179 AGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGG 106238 || || |||| || ||||| || || ||||| ||||| | || | ||||||| Sbjct 326927 AGGAGGCTTCCAAAGAAGCGTGGTAGATAGTTTCGAAGATTTGGATGTTTAGATCCTTGG 326986 Query 106239 CTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACAC 106298 |||| | || ||||||| || ||| ||||| || || || | ||| | |||| Sbjct 326987 CTTCTTGAGACTCAAATGGAACACGCAACATCATAAACACGTCAGCCAAACCATTGACAC 327046 Query 106299 CCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAAT 106358 | | | | |||||||||| || ||||||||| |||| || ||| || || | | Sbjct 327047 CTAGAGCCATAGGTCTGTTTCTCATATTAGAGTTTCTAGCTTCAGGAACTGGGTAGTAGT 327106 Query 106359 TTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTT 106418 ||| || ||||| ||| | || || | || ||| | |||| ||| | || Sbjct 327107 TTCGATCGATGACCTTGTTCAAGTTACGAGTGATAACCTTGGCAATTTTATGCAACTTGG 327166 Query 106419 CATAATCAAAAGTGCGAGTCT------CTTCA-----TTGAC-ATACTTTGGAAGGGCGA 106466 || ||||| | | |||| | ||| |||| | || ||| | |||| Sbjct 327167 CAAAATCATACCACTGGGTCTTACCATCATCAGCAACTTGAATACACGATGGTAAAGCGA 327226 Query 106467 TTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTAC 106526 | || ||||| || ||||| || |||||||| ||| |||||| | ||||| || Sbjct 327227 TGGAGGCCAAGTTACAAACGGCAGTCTCATCAGGTGCTGAGTACTCAACGATTTCACAAC 327286 Query 106527 ACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCAT 106586 ||||||| || ||||| || ||||| ||||||||||| |||||| | || || |||| Sbjct 327287 ACAAGTTAGAGGATTTAATGGTACCCAAGTTCTTTTGGTTGCTCTTTATATTACAGGCAT 327346 Query 106587 CCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACA 106646 | ||||| |||||| | || || || ||||| || || || | | || || | ||||| Sbjct 327347 CTTTGTAAAGCATGAATGGAGTACCAGTCTCTGTTTGAGATTCCAAGATAGCGTACCACA 327406 Query 106647 CATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGG 106706 | ||| | | | | | || || || || |||| | || | || Sbjct 327407 GTTTTTGAGCTTTGATAGTCTTTCTACCACGACCTTCAGCGACGTAACGTTCATACAAGG 327466 Query 106707 CTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAG 106766 ||||||| || ||||| | || || | |||||| || | |||| |||| | || Sbjct 327467 CTTCAAATTCATCACCATAAACATCAGACAAACCTGGAGCTTCACTTGGAGAGAACAAAG 327526 Query 106767 ACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAA 106826 ||||| |||| ||| | ||| || |||||||| | ||||||||||| |||| || | Sbjct 327527 TCCATTCACCATTCTCTTGAACACGTTTCATGAACAAATCTGGAATCCAGAGGGCTGGGA 327586 Query 106827 AGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCA 106886 | | |||||| ||| |||||| | ||| ||||| || | || | ||| || | Sbjct 327587 ACAAATCTCTTGCACGAATCTCTTCCTTACCGTGGTTCTTCCGGATATCTATGAAATCAA 327646 Query 106887 TGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC----CTTTCGACGCCCA 106942 ||| || ||||||||||| || | || | |||| || || |||| | || | Sbjct 327647 AGATGTCTGCGTGCCATGGTTCCAAGTACAAAGCGAAAGCACCTGGCCTTTTGTTACC-A 327705 Query 106943 GCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCT 107002 |||||| ||||| || || ||| ||| || || || | ||| || || | || | Sbjct 327706 CCTTGATCCACATAACGAGCAGTGTTGTTGAAGACACGTACCATGGGGATCAACCCGTTC 327765 Query 107003 GATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATC 107062 || ||| || || || |||| || | | | | | || ||||||| Sbjct 327766 GAAGTACCGTTAGTACCTGCAATATATGAACCCGTAGAACGAATGTTGTGTATGTGCAAA 327825 Query 107063 CCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCG 107122 |||||||| ||||| ||| || || ||||| ||| | | ||| | || ||||| Sbjct 327826 CCAATACCACCAGCGGTCTTAGAAATCATAGCACATTCCTTCAAAGTATCGTAAATACCC 327885 Query 107123 TTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTA 107182 | ||| ||||| ||||| ||||||| ||||| || |||||||| || | ||| ||| Sbjct 327886 TCGATGGAGTCATCCTTCATGGCGATTAGGAAACATGAAGACATCTGAGGGCGTGGAGTA 327945 Query 107183 CCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-TGGGACATCTTGTCGTA 107241 ||||||||||| || ||||| | || |||||||| || || ||||||| | || Sbjct 327946 CCAGCATTGAAAAGAGTTGGAGAAGCATGAATGAA-GTATCTCAAGGACATCAGATTATA 328004 Query 107242 TGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACAT 107301 ||||| | |||| || ||||| || || || || || | || || | ||||| ||| Sbjct 328005 AGTCTCAATAGCAGACTCGATGTCGTCACCATGAATACCAACAGCAACTCTCATAATCAT 328064 Query 107302 GTATTGGGG 107310 | ||| || Sbjct 328065 ATGTTGAGG 328073 >seq1 Length=1424806 Score = 118 bits (130), Expect = 1e-21 Identities = 273/406 (67%), Gaps = 13/406 (3%) Strand=Plus/Minus Query 9282 AAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGC 9341 |||||||||||||| |||||||||||| | || | ||| | |||||| |||||| | Sbjct 446931 AAACCATCCATCTCAACCAAAAGTTGGTTCAAGGTATTTTCTCTTTCATCGTTCGCTC-C 446873 Query 9342 ATACCACCAGCACT---GCGTTGCTTTCCCACG-GCATCAATCTCATCAATGAAGACAAT 9397 | || || | ||||||| ||| |||||||| ||||| |||||||| || Sbjct 446872 TGAAATGTTGCCCTTTTGTCTTGCTTTACCAATAGCATCAATTTCATCGATGAAGACCAT 446813 Query 9398 ACATGGTTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCGCCCACACC 9457 | |||| || || | ||| | | || | || || || || || || ||||| Sbjct 446812 AGATGGAGCGTTCTCCCTAGCGGTCTTGAACAAGTCACGCACTCTCGAAGCACCGACACC 446753 Query 9458 AACAAACATCTCCACAAAGTTTGCGG----CGGAACATTGGATGAAGGGGACATTAGATT 9513 |||||||| || ||||| | ||| || |||| | | ||| ||||| || || Sbjct 446752 GACAAACATTTCAACAAACT---CGGAACCCGAAACAAAGAA-GAATGGGACTCCAGCTT 446697 Query 9514 CACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGG 9573 |||| ||| |||| || | ||||||||||| |||||||| ||| | ||| | | Sbjct 446696 CACCAGCAGTGGCCTTAGCCAATAGAGTCTTACCAGTACCTGGAGGACCAGAGAGAATAG 446637 Query 9574 CACCCCGTGGAATCTTGGCGCCACTTCCAAAGTATCTCTCAGGTTGCTTGAGAAAATCCA 9633 |||| | ||||||||| || || || |||||||| ||||| || | ||| | Sbjct 446636 CACCTCTTGGAATCTTAGCTCCCATTTTTTCGTATCTCTTAGGTTCTTTCAAGAAACTGA 446577 Query 9634 CAATCTCTTCCAATTCATCTTTGGCGGCGTCAATCCCCTCAACATC 9679 | | ||| | ||| |||||||| ||||| || ||||||| Sbjct 446576 CGAACTCCATAATTTCCTCTTTGGCTTCGTCACATCCGGCAACATC 446531 Score = 100 bits (110), Expect = 3e-16 Identities = 185/267 (69%), Gaps = 7/267 (3%) Strand=Plus/Plus Query 106730 TCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCCTCCTCAACC 106789 ||| | || || || |||| ||||||| || | | |||| | ||| ||| ||| Sbjct 989126 TCGCATAGTCCAGGGGCCTCATCTGGACTAAACAAACACCAATCGCCATTGGACTCGACC 989185 Query 106790 CGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCT 106849 ||| ||||||| ||||| || |||||||| | |||| |||||||| | ||| Sbjct 989186 CGCCTCATGAACAGGTCAGGTATCCACAGCGCAAAAAACAGATCTCTGGCTCTCATTTCT 989245 Query 106850 TCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCA 106909 || | ||| ||||| ||| | || || || || | ||| ||||| ||||||||||| Sbjct 989246 TCTTTACCGTGGTTCTTTCGAAGCTGTAGAAAATCAAGGATGTCCGCATGCCATGGCTCG 989305 Query 106910 AGATAGACTGCGAT-AGATC----CCTTTCGACGCCCAGCTTGATTTACATAGCGCGCTG 106964 ||||| | ||| || || || ||| | | | ||| | |||| |||||| | || | Sbjct 989306 AGATATA-TGCAATAAGCTCCGGGCCTCTTGTTG-CCACCCTGATCTACATATCTTGCAG 989363 Query 106965 TGGCGTTAAATACGCGAAGCATTGGAA 106991 || || || |||||||||||||||| Sbjct 989364 TGTTATTGAAAACGCGAAGCATTGGAA 989390 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589980387013440